RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 CCDC32Q9BV29 185 aa9.58□□□□□ -0.88
CHD3-206ENST00000452447 IGKV3-7A0A075B6H7 116 aa9.58□□□□□ -0.88
CHD3-206ENST00000452447 CTDSPLO15194 276 aa9.58□□□□□ -0.88
CHD3-206ENST00000452447 OR5AC1P0C628 307 aa9.58□□□□□ -0.88
CHD3-206ENST00000452447 SURF2Q15527 256 aaPredicted RBP9.58□□□□□ -0.88
CHD3-206ENST00000452447 ODF3L2Q3SX64 289 aa9.58□□□□□ -0.88
CHD3-206ENST00000452447 PYDC2Q56P42 97 aa9.58□□□□□ -0.88
CHD3-206ENST00000452447 Q6ZWC4 215 aa9.58□□□□□ -0.88
CHD3-206ENST00000452447 STPG3Q8N7X2 389 aa9.58□□□□□ -0.88
CHD3-206ENST00000452447 TMEM222Q9H0R3 208 aa9.58□□□□□ -0.88
CHD3-206ENST00000452447 IGHV3OR16-13A0A075B7E8 117 aa9.57□□□□□ -0.88
CHD3-206ENST00000452447 IGHV3-74A0A0B4J1X5 117 aa9.57□□□□□ -0.88
CHD3-206ENST00000452447 UBE2CO00762 179 aa9.57□□□□□ -0.88
CHD3-206ENST00000452447 AKAIN1P0CW23 69 aa9.57□□□□□ -0.88
CHD3-206ENST00000452447 TFPI2P48307 235 aa9.57□□□□□ -0.88
CHD3-206ENST00000452447 CMC4P56277 68 aaPredicted RBP9.57□□□□□ -0.88
CHD3-206ENST00000452447 AP3S2P59780 193 aa9.57□□□□□ -0.88
CHD3-206ENST00000452447 PAFAH1B2P68402 229 aa9.57□□□□□ -0.88
CHD3-206ENST00000452447 TOMM20LQ6UXN7 152 aa9.57□□□□□ -0.88
CHD3-206ENST00000452447 FAM219AQ8IW50 185 aa9.57□□□□□ -0.88
CHD3-206ENST00000452447 DEDD2Q8WXF8 326 aa9.57□□□□□ -0.88
CHD3-206ENST00000452447 PRRT1Q99946 306 aa9.57□□□□□ -0.88
CHD3-206ENST00000452447 RTBDNQ9BSG5 229 aaPredicted RBP9.57□□□□□ -0.88
CHD3-206ENST00000452447 KIR2DL5BA0A0G2JN68 375 aa9.56□□□□□ -0.88
CHD3-206ENST00000452447 KIR2DL5BA0A0G2JPC4 375 aa9.56□□□□□ -0.88
CHD3-206ENST00000452447 A0A0G2JRQ6 117 aa9.56□□□□□ -0.88
CHD3-206ENST00000452447 SPRY2O43597 315 aa9.56□□□□□ -0.88
CHD3-206ENST00000452447 SCGB2A1O75556 95 aa9.56□□□□□ -0.88
CHD3-206ENST00000452447 JTBO76095 146 aa9.56□□□□□ -0.88
CHD3-206ENST00000452447 CDS2O95674 445 aa9.56□□□□□ -0.88
CHD3-206ENST00000452447 CD5P06127 495 aa9.56□□□□□ -0.88
CHD3-206ENST00000452447 RNASE2P10153 161 aaKnown RBP9.56□□□□□ -0.88
CHD3-206ENST00000452447 RPL35AP18077 110 aaKnown RBP9.56□□□□□ -0.88
CHD3-206ENST00000452447 OPRK1P41145 380 aa9.56□□□□□ -0.88
CHD3-206ENST00000452447 DHODHQ02127 395 aa9.56□□□□□ -0.88
CHD3-206ENST00000452447 DEFB135Q30KP9 77 aa9.56□□□□□ -0.88
CHD3-206ENST00000452447 TRIQKQ629K1 86 aa9.56□□□□□ -0.88
CHD3-206ENST00000452447 ZNF600Q6ZNG1 722 aa9.56□□□□□ -0.88
CHD3-206ENST00000452447 KIR2DL5AQ8N109 375 aa9.56□□□□□ -0.88
CHD3-206ENST00000452447 OR4C16Q8NGL9 310 aa9.56□□□□□ -0.88
CHD3-206ENST00000452447 KIR2DL5BQ8NHK3 375 aa9.56□□□□□ -0.88
CHD3-206ENST00000452447 GLYATL2Q8WU03 294 aa9.56□□□□□ -0.88
CHD3-206ENST00000452447 RBPMSQ93062 196 aaKnown RBP9.56□□□□□ -0.88
CHD3-206ENST00000452447 GALNT14Q96FL9 552 aa9.56□□□□□ -0.88
CHD3-206ENST00000452447 ZNF414Q96IQ9 312 aa9.56□□□□□ -0.88
CHD3-206ENST00000452447 NAA60Q9H7X0 242 aa9.56□□□□□ -0.88
CHD3-206ENST00000452447 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.56□□□□□ -0.88
CHD3-206ENST00000452447 TP53TG1Q9Y2A0 90 aa9.56□□□□□ -0.88
CHD3-206ENST00000452447 PUS1Q9Y606 427 aaKnown RBP eCLIP9.56□□□□□ -0.88
CHD3-206ENST00000452447 ALMS1Q8TCU4 4167 aa9.56□□□□□ -0.88
CHD3-206ENST00000452447 TMEM50AO95807 157 aa9.55□□□□□ -0.88
CHD3-206ENST00000452447 SPCS3P61009 180 aa9.55□□□□□ -0.88
CHD3-206ENST00000452447 Q6ZRM9 215 aa9.55□□□□□ -0.88
CHD3-206ENST00000452447 GBGT1Q8N5D6 347 aa9.55□□□□□ -0.88
CHD3-206ENST00000452447 GPR132Q9UNW8 380 aa9.55□□□□□ -0.88
CHD3-206ENST00000452447 V9GYH0 126 aa9.55□□□□□ -0.88
CHD3-206ENST00000452447 FAUP35544 74 aaKnown RBP9.54□□□□□ -0.88
CHD3-206ENST00000452447 HTR2BP41595 481 aa9.54□□□□□ -0.88
CHD3-206ENST00000452447 RPL11P62913 178 aaKnown RBP9.54□□□□□ -0.88
CHD3-206ENST00000452447 TMEM268Q5VZI3 342 aa9.54□□□□□ -0.88
CHD3-206ENST00000452447 PVRIGQ6DKI7 326 aa9.54□□□□□ -0.88
CHD3-206ENST00000452447 TCF24Q7RTU0 167 aa9.54□□□□□ -0.88
CHD3-206ENST00000452447 WFDC3Q8IUB2 231 aa9.54□□□□□ -0.88
CHD3-206ENST00000452447 APRG1Q8IVJ8 170 aa9.54□□□□□ -0.88
CHD3-206ENST00000452447 SELENOHQ8IZQ5 122 aaKnown RBP9.54□□□□□ -0.88
CHD3-206ENST00000452447 OR51S1Q8NGJ8 323 aa9.54□□□□□ -0.88
CHD3-206ENST00000452447 OR52E5Q8NH55 327 aa9.54□□□□□ -0.88
CHD3-206ENST00000452447 SCGB3A2Q96PL1 93 aa9.54□□□□□ -0.88
CHD3-206ENST00000452447 TMEM231Q9H6L2 316 aa9.54□□□□□ -0.88
CHD3-206ENST00000452447 HEYLQ9NQ87 328 aaPredicted RBP9.54□□□□□ -0.88
CHD3-206ENST00000452447 CACNG5Q9UF02 275 aa9.54□□□□□ -0.88
CHD3-206ENST00000452447 SCP2D1Q9UJQ7 156 aa9.54□□□□□ -0.88
CHD3-206ENST00000452447 KCNIP3Q9Y2W7 256 aa9.54□□□□□ -0.88
CHD3-206ENST00000452447 CRYM-AS1A6NIL9 109 aa9.54□□□□□ -0.88
CHD3-206ENST00000452447 CENPXA8MT69 81 aa9.54□□□□□ -0.88
CHD3-206ENST00000452447 DNASE2O00115 360 aaPredicted RBP9.54□□□□□ -0.88
CHD3-206ENST00000452447 GSTZ1O43708 216 aaPredicted RBP9.54□□□□□ -0.88
CHD3-206ENST00000452447 CLN5O75503 358 aa9.54□□□□□ -0.88
CHD3-206ENST00000452447 NPPCP23582 126 aa9.54□□□□□ -0.88
CHD3-206ENST00000452447 DEFA1P59665 94 aa9.54□□□□□ -0.88
CHD3-206ENST00000452447 DEFA3P59666 94 aa9.54□□□□□ -0.88
CHD3-206ENST00000452447 FAM90A2PQ658T7 463 aa9.54□□□□□ -0.88
CHD3-206ENST00000452447 OR4X1Q8NH49 305 aa9.54□□□□□ -0.88
CHD3-206ENST00000452447 LHFPL5Q8TAF8 219 aa9.54□□□□□ -0.88
CHD3-206ENST00000452447 ST8SIA2Q92186 375 aa9.54□□□□□ -0.88
CHD3-206ENST00000452447 SOSTQ9BQB4 213 aa9.54□□□□□ -0.88
CHD3-206ENST00000452447 SRRQ9GZT4 340 aa9.54□□□□□ -0.88
CHD3-206ENST00000452447 MAP6D1Q9H9H5 199 aa9.54□□□□□ -0.88
CHD3-206ENST00000452447 MCUBQ9NWR8 336 aa9.54□□□□□ -0.88
CHD3-206ENST00000452447 IGHV3-66A0A0C4DH42 116 aa9.53□□□□□ -0.88
CHD3-206ENST00000452447 A0A0J9YWU9 116 aa9.53□□□□□ -0.88
CHD3-206ENST00000452447 RPS10-NUDT3A0A1W2PQS6 291 aa9.53□□□□□ -0.88
CHD3-206ENST00000452447 A0A1W2PS18 150 aa9.53□□□□□ -0.88
CHD3-206ENST00000452447 ANKRD20A5PA0PJZ0 165 aa9.53□□□□□ -0.88
CHD3-206ENST00000452447 CEBPZOSA8MTT3 80 aa9.53□□□□□ -0.88
CHD3-206ENST00000452447 DFFBO76075 338 aa9.53□□□□□ -0.88
CHD3-206ENST00000452447 APOHP02749 345 aaPredicted RBP9.53□□□□□ -0.88
CHD3-206ENST00000452447 MLANAQ16655 118 aa9.53□□□□□ -0.88
CHD3-206ENST00000452447 BSXQ3C1V8 233 aa9.53□□□□□ -0.88
CHD3-206ENST00000452447 AARDQ4LEZ3 155 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms