RNA–Protein interactions for RNA: ENST00000452182.1

SCN9A-204, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-204ENST00000452182 PMS2P5A8MQ11 134 aa8.95□□□□□ -0.98
SCN9A-204ENST00000452182 PRSS46E5RG02 174 aa8.95□□□□□ -0.98
SCN9A-204ENST00000452182 SLC25A4P12235 298 aa8.95□□□□□ -0.98
SCN9A-204ENST00000452182 GPX4P36969 197 aaPredicted RBP8.95□□□□□ -0.98
SCN9A-204ENST00000452182 OPRK1P41145 380 aa8.95□□□□□ -0.98
SCN9A-204ENST00000452182 DEFA5Q01523 94 aa8.95□□□□□ -0.98
SCN9A-204ENST00000452182 CD69Q07108 199 aa8.95□□□□□ -0.98
SCN9A-204ENST00000452182 SPATA3Q8NHX4 192 aa8.95□□□□□ -0.98
SCN9A-204ENST00000452182 THAP6Q8TBB0 222 aa8.95□□□□□ -0.98
SCN9A-204ENST00000452182 PINX1Q96BK5 328 aaKnown RBP8.95□□□□□ -0.98
SCN9A-204ENST00000452182 CCDC140Q96MF4 163 aa8.95□□□□□ -0.98
SCN9A-204ENST00000452182 TXN2Q99757 166 aa8.95□□□□□ -0.98
SCN9A-204ENST00000452182 GAR1Q9NY12 217 aaKnown RBP8.95□□□□□ -0.98
SCN9A-204ENST00000452182 C21orf62Q9NYP8 219 aa8.95□□□□□ -0.98
SCN9A-204ENST00000452182 ANK2Q01484 3957 aa8.95□□□□□ -0.98
SCN9A-204ENST00000452182 STAB1Q9NY15 2570 aa8.95□□□□□ -0.98
SCN9A-204ENST00000452182 ELOA3CA0A087WX78 387 aaPredicted RBP8.94□□□□□ -0.98
SCN9A-204ENST00000452182 TRAV14DV4A0A0A6YYC5 116 aa8.94□□□□□ -0.98
SCN9A-204ENST00000452182 IGHV3-11P01762 117 aa8.94□□□□□ -0.98
SCN9A-204ENST00000452182 BCAP31P51572 246 aa8.94□□□□□ -0.98
SCN9A-204ENST00000452182 CAV2P51636 162 aa8.94□□□□□ -0.98
SCN9A-204ENST00000452182 C18orf65Q6ZTR6 163 aa8.94□□□□□ -0.98
SCN9A-204ENST00000452182 TMEM252Q8N6L7 170 aa8.94□□□□□ -0.98
SCN9A-204ENST00000452182 OR2T35Q8NGX2 323 aa8.94□□□□□ -0.98
SCN9A-204ENST00000452182 MBD2Q9UBB5 411 aa8.94□□□□□ -0.98
SCN9A-204ENST00000452182 A0A1B0GVG6 124 aa8.94□□□□□ -0.98
SCN9A-204ENST00000452182 FAM24AA6NFZ4 105 aa8.94□□□□□ -0.98
SCN9A-204ENST00000452182 NUDT19A8MXV4 375 aa8.94□□□□□ -0.98
SCN9A-204ENST00000452182 F8W735 103 aaPredicted RBP8.94□□□□□ -0.98
SCN9A-204ENST00000452182 HSPB1P04792 205 aaKnown RBP8.94□□□□□ -0.98
SCN9A-204ENST00000452182 SULT1A1P50225 295 aa8.94□□□□□ -0.98
SCN9A-204ENST00000452182 MFAP4P55083 255 aa8.94□□□□□ -0.98
SCN9A-204ENST00000452182 HIST2H2BDQ6DRA6 164 aa8.94□□□□□ -0.98
SCN9A-204ENST00000452182 C8orf86Q6ZUL3 223 aa8.94□□□□□ -0.98
SCN9A-204ENST00000452182 TMEM116Q8NCL8 245 aa8.94□□□□□ -0.98
SCN9A-204ENST00000452182 OR4X1Q8NH49 305 aa8.94□□□□□ -0.98
SCN9A-204ENST00000452182 GGACTQ9BVM4 153 aa8.94□□□□□ -0.98
SCN9A-204ENST00000452182 RANGRFQ9HD47 186 aaPredicted RBP8.94□□□□□ -0.98
SCN9A-204ENST00000452182 PEF1Q9UBV8 284 aaKnown RBP8.94□□□□□ -0.98
SCN9A-204ENST00000452182 PAIP2BQ9ULR5 123 aaKnown RBP8.94□□□□□ -0.98
SCN9A-204ENST00000452182 hCG_2014768A0A024R1R8 64 aa8.93□□□□□ -0.98
SCN9A-204ENST00000452182 A0A1W2PRX2 142 aa8.93□□□□□ -0.98
SCN9A-204ENST00000452182 FNDC10F2Z333 226 aa8.93□□□□□ -0.98
SCN9A-204ENST00000452182 G3V3Q6 166 aa8.93□□□□□ -0.98
SCN9A-204ENST00000452182 CLEC3BP05452 202 aa8.93□□□□□ -0.98
SCN9A-204ENST00000452182 METTL15P1P0C7V9 234 aa8.93□□□□□ -0.98
SCN9A-204ENST00000452182 NPBWR1P48145 328 aa8.93□□□□□ -0.98
SCN9A-204ENST00000452182 BAXQ07812 192 aa8.93□□□□□ -0.98
SCN9A-204ENST00000452182 FHL3Q13643 280 aa8.93□□□□□ -0.98
SCN9A-204ENST00000452182 MLANAQ16655 118 aa8.93□□□□□ -0.98
SCN9A-204ENST00000452182 NSUN5P1Q3KNT7 163 aa8.93□□□□□ -0.98
SCN9A-204ENST00000452182 Q5BKY6 102 aa8.93□□□□□ -0.98
SCN9A-204ENST00000452182 SPSB3Q6PJ21 355 aa8.93□□□□□ -0.98
SCN9A-204ENST00000452182 CLEC19AQ6UXS0 136 aa8.93□□□□□ -0.98
SCN9A-204ENST00000452182 SLC16A13Q7RTY0 426 aa8.93□□□□□ -0.98
SCN9A-204ENST00000452182 STX12Q86Y82 276 aa8.93□□□□□ -0.98
SCN9A-204ENST00000452182 OR4F17Q8NGA8 305 aa8.93□□□□□ -0.98
SCN9A-204ENST00000452182 OR10P1Q8NGE3 313 aa8.93□□□□□ -0.98
SCN9A-204ENST00000452182 BSCL2Q96G97 398 aaPredicted RBP8.93□□□□□ -0.98
SCN9A-204ENST00000452182 OR5B12Q96R08 314 aa8.93□□□□□ -0.98
SCN9A-204ENST00000452182 OR4F4Q96R69 305 aa8.93□□□□□ -0.98
SCN9A-204ENST00000452182 SLC25A31Q9H0C2 315 aa8.93□□□□□ -0.98
SCN9A-204ENST00000452182 IGHV3-21A0A0B4J1V1 117 aa8.92□□□□□ -0.98
SCN9A-204ENST00000452182 IGSF23A1L1A6 192 aa8.92□□□□□ -0.98
SCN9A-204ENST00000452182 CLN5O75503 358 aa8.92□□□□□ -0.98
SCN9A-204ENST00000452182 DLK1P80370 383 aa8.92□□□□□ -0.98
SCN9A-204ENST00000452182 ZNF616Q08AN1 781 aa8.92□□□□□ -0.98
SCN9A-204ENST00000452182 ACSM6Q6P461 480 aa8.92□□□□□ -0.98
SCN9A-204ENST00000452182 HAPLN4Q86UW8 402 aa8.92□□□□□ -0.98
SCN9A-204ENST00000452182 OR11H1Q8NG94 326 aa8.92□□□□□ -0.98
SCN9A-204ENST00000452182 ST6GAL2Q96JF0 529 aa8.92□□□□□ -0.98
SCN9A-204ENST00000452182 S4R3C0 116 aa8.92□□□□□ -0.98
SCN9A-204ENST00000452182 TRAV30A0A087WSZ9 112 aa8.91□□□□□ -0.98
SCN9A-204ENST00000452182 ANKRD34BA5PLL1 514 aa8.91□□□□□ -0.98
SCN9A-204ENST00000452182 LINC01619G3V211 115 aa8.91□□□□□ -0.98
SCN9A-204ENST00000452182 M0QZ24 198 aa8.91□□□□□ -0.98
SCN9A-204ENST00000452182 CCL24O00175 119 aa8.91□□□□□ -0.98
SCN9A-204ENST00000452182 CCNKO75909 580 aa8.91□□□□□ -0.98
SCN9A-204ENST00000452182 TRBV12-3P01733 135 aa8.91□□□□□ -0.98
SCN9A-204ENST00000452182 IGHV3-48P01763 117 aa8.91□□□□□ -0.98
SCN9A-204ENST00000452182 IGHV3-23P01764 117 aa8.91□□□□□ -0.98
SCN9A-204ENST00000452182 CTSGP08311 255 aa8.91□□□□□ -0.98
SCN9A-204ENST00000452182 ZP3P21754 424 aa8.91□□□□□ -0.98
SCN9A-204ENST00000452182 S100A11P31949 105 aa8.91□□□□□ -0.98
SCN9A-204ENST00000452182 GPR183P32249 361 aa8.91□□□□□ -0.98
SCN9A-204ENST00000452182 MYCNOSP40205 109 aa8.91□□□□□ -0.98
SCN9A-204ENST00000452182 HBG1P69891 147 aa8.91□□□□□ -0.98
SCN9A-204ENST00000452182 HBG2P69892 147 aa8.91□□□□□ -0.98
SCN9A-204ENST00000452182 EWSR1Q01844 656 aaKnown RBP eCLIP8.91□□□□□ -0.98
SCN9A-204ENST00000452182 GAMTQ14353 236 aa8.91□□□□□ -0.98
SCN9A-204ENST00000452182 DEFB136Q30KP8 78 aa8.91□□□□□ -0.98
SCN9A-204ENST00000452182 Q56UQ5 140 aa8.91□□□□□ -0.98
SCN9A-204ENST00000452182 OR8G2PQ6IF36 304 aa8.91□□□□□ -0.98
SCN9A-204ENST00000452182 ACOT7LQ6ZUV0 252 aa8.91□□□□□ -0.98
SCN9A-204ENST00000452182 TCTE3Q8IZS6 198 aa8.91□□□□□ -0.98
SCN9A-204ENST00000452182 OR1N2Q8NGR9 330 aa8.91□□□□□ -0.98
SCN9A-204ENST00000452182 DCUN1D4Q92564 292 aa8.91□□□□□ -0.98
SCN9A-204ENST00000452182 RAX2Q96IS3 184 aa8.91□□□□□ -0.98
SCN9A-204ENST00000452182 SLC35E1Q96K37 410 aa8.91□□□□□ -0.98
SCN9A-204ENST00000452182 MRPL36Q9P0J6 103 aaKnown RBP8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms