RNA–Protein interactions for RNA: ENST00000451716.5

COL27A1-202, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 2,865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-202ENST00000451716 PLAUP00749 431 aa9.84□□□□□ -0.83
COL27A1-202ENST00000451716 PPIAL4GP0DN37 164 aa9.84□□□□□ -0.83
COL27A1-202ENST00000451716 DLX1P56177 255 aa9.84□□□□□ -0.83
COL27A1-202ENST00000451716 HSPE1P61604 102 aaKnown RBP9.84□□□□□ -0.83
COL27A1-202ENST00000451716 ACOT6Q3I5F7 207 aaPredicted RBP9.84□□□□□ -0.83
COL27A1-202ENST00000451716 MOB3BQ86TA1 216 aa9.84□□□□□ -0.83
COL27A1-202ENST00000451716 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.84□□□□□ -0.83
COL27A1-202ENST00000451716 OR51G1Q8NGK1 321 aa9.84□□□□□ -0.83
COL27A1-202ENST00000451716 TMEM204Q9BSN7 226 aa9.84□□□□□ -0.83
COL27A1-202ENST00000451716 MRPL20Q9BYC9 149 aaKnown RBP9.84□□□□□ -0.83
COL27A1-202ENST00000451716 TMEM106BQ9NUM4 274 aa9.84□□□□□ -0.83
COL27A1-202ENST00000451716 OR51B2Q9Y5P1 312 aa9.84□□□□□ -0.83
COL27A1-202ENST00000451716 CSMD1Q96PZ7 3565 aa9.84□□□□□ -0.83
COL27A1-202ENST00000451716 A0A1B0GW15 77 aa9.84□□□□□ -0.83
COL27A1-202ENST00000451716 GRNP28799 593 aaKnown RBP9.84□□□□□ -0.83
COL27A1-202ENST00000451716 PDLIM3Q53GG5 364 aaPredicted RBP9.84□□□□□ -0.83
COL27A1-202ENST00000451716 TMEM177Q53S58 311 aa9.84□□□□□ -0.83
COL27A1-202ENST00000451716 ERASQ7Z444 233 aa9.84□□□□□ -0.83
COL27A1-202ENST00000451716 OR4X1Q8NH49 305 aa9.84□□□□□ -0.83
COL27A1-202ENST00000451716 LINC01560Q8TB33 94 aa9.84□□□□□ -0.83
COL27A1-202ENST00000451716 MALRD1Q5VYJ5 2156 aa9.83□□□□□ -0.84
COL27A1-202ENST00000451716 PPP5D1E7EU14 171 aa9.83□□□□□ -0.84
COL27A1-202ENST00000451716 LYNX1G3V0Z9 82 aa9.83□□□□□ -0.84
COL27A1-202ENST00000451716 LYNX1P0DP58 116 aa9.83□□□□□ -0.84
COL27A1-202ENST00000451716 NPY1RP25929 384 aa9.83□□□□□ -0.84
COL27A1-202ENST00000451716 TOMM20LQ6UXN7 152 aa9.83□□□□□ -0.84
COL27A1-202ENST00000451716 ZNF714Q96N38 554 aa9.83□□□□□ -0.84
COL27A1-202ENST00000451716 GGTLC1Q9BX51 225 aa9.83□□□□□ -0.84
COL27A1-202ENST00000451716 PARLQ9H300 379 aa9.83□□□□□ -0.84
COL27A1-202ENST00000451716 LINC00574Q9H8X3 128 aa9.83□□□□□ -0.84
COL27A1-202ENST00000451716 ENY2Q9NPA8 101 aa9.83□□□□□ -0.84
COL27A1-202ENST00000451716 CTSZQ9UBR2 303 aa9.83□□□□□ -0.84
COL27A1-202ENST00000451716 PXMP4Q9Y6I8 212 aa9.83□□□□□ -0.84
COL27A1-202ENST00000451716 SPTBN1Q01082 2364 aaKnown RBP9.83□□□□□ -0.84
COL27A1-202ENST00000451716 NAV3Q8IVL0 2385 aa9.83□□□□□ -0.84
COL27A1-202ENST00000451716 PPIAL4CA0A0B4J2A2 164 aa9.83□□□□□ -0.84
COL27A1-202ENST00000451716 A0A1W2PPV4 95 aa9.83□□□□□ -0.84
COL27A1-202ENST00000451716 HRASP01112 189 aa9.83□□□□□ -0.84
COL27A1-202ENST00000451716 CST9LP1Q5W188 147 aa9.83□□□□□ -0.84
COL27A1-202ENST00000451716 NECAP1Q8NC96 275 aa9.83□□□□□ -0.84
COL27A1-202ENST00000451716 OR1N2Q8NGR9 330 aa9.83□□□□□ -0.84
COL27A1-202ENST00000451716 FOXA2Q9Y261 457 aaPredicted RBP9.83□□□□□ -0.84
COL27A1-202ENST00000451716 FAM90A27PA6NNH2 459 aa9.82□□□□□ -0.84
COL27A1-202ENST00000451716 J3QR06 171 aa9.82□□□□□ -0.84
COL27A1-202ENST00000451716 OR7C2O60412 319 aa9.82□□□□□ -0.84
COL27A1-202ENST00000451716 SAA1P0DJI8 122 aaPredicted RBP9.82□□□□□ -0.84
COL27A1-202ENST00000451716 NPPCP23582 126 aa9.82□□□□□ -0.84
COL27A1-202ENST00000451716 RANP62826 216 aaKnown RBP9.82□□□□□ -0.84
COL27A1-202ENST00000451716 CLEC12BQ2HXU8 276 aa9.82□□□□□ -0.84
COL27A1-202ENST00000451716 SFRP2Q96HF1 295 aa9.82□□□□□ -0.84
COL27A1-202ENST00000451716 ADTRPQ96IZ2 230 aa9.82□□□□□ -0.84
COL27A1-202ENST00000451716 C11orf94C9JXX5 98 aa9.82□□□□□ -0.84
COL27A1-202ENST00000451716 ATP5G3P48201 142 aa9.82□□□□□ -0.84
COL27A1-202ENST00000451716 PNRC1Q12796 327 aaPredicted RBP9.82□□□□□ -0.84
COL27A1-202ENST00000451716 MLANAQ16655 118 aa9.82□□□□□ -0.84
COL27A1-202ENST00000451716 RTL8BQ17RB0 113 aa9.82□□□□□ -0.84
COL27A1-202ENST00000451716 LAMTOR2Q9Y2Q5 125 aa9.82□□□□□ -0.84
COL27A1-202ENST00000451716 RAXQ9Y2V3 346 aa9.82□□□□□ -0.84
COL27A1-202ENST00000451716 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.81□□□□□ -0.84
COL27A1-202ENST00000451716 RPS20P60866 119 aaKnown RBP9.81□□□□□ -0.84
COL27A1-202ENST00000451716 RAB31Q13636 194 aa9.81□□□□□ -0.84
COL27A1-202ENST00000451716 TMEM183BQ1AE95 376 aa9.81□□□□□ -0.84
COL27A1-202ENST00000451716 SPATA31B1PQ5VZV4 182 aa9.81□□□□□ -0.84
COL27A1-202ENST00000451716 SPTAN1Q13813 2472 aaKnown RBP9.81□□□□□ -0.84
COL27A1-202ENST00000451716 B4DEV8 164 aa9.81□□□□□ -0.84
COL27A1-202ENST00000451716 NDUFB3O43676 98 aa9.81□□□□□ -0.84
COL27A1-202ENST00000451716 KBTBD11O94819 623 aa9.81□□□□□ -0.84
COL27A1-202ENST00000451716 ARL14EPLP0DKL9 152 aa9.81□□□□□ -0.84
COL27A1-202ENST00000451716 OPRK1P41145 380 aa9.81□□□□□ -0.84
COL27A1-202ENST00000451716 CKS1BP61024 79 aa9.81□□□□□ -0.84
COL27A1-202ENST00000451716 DERL1Q9BUN8 251 aa9.81□□□□□ -0.84
COL27A1-202ENST00000451716 NPVFQ9HCQ7 196 aa9.81□□□□□ -0.84
COL27A1-202ENST00000451716 NAT8Q9UHE5 227 aa9.81□□□□□ -0.84
COL27A1-202ENST00000451716 CLDN34H7C241 214 aa9.81□□□□□ -0.84
COL27A1-202ENST00000451716 UPK2O00526 184 aa9.81□□□□□ -0.84
COL27A1-202ENST00000451716 IGFBP2P18065 325 aa9.81□□□□□ -0.84
COL27A1-202ENST00000451716 TMPRSS3P57727 454 aa9.81□□□□□ -0.84
COL27A1-202ENST00000451716 RPL23P62829 140 aaKnown RBP9.81□□□□□ -0.84
COL27A1-202ENST00000451716 PRSS8Q16651 343 aa9.81□□□□□ -0.84
COL27A1-202ENST00000451716 COA6Q5JTJ3 125 aaKnown RBP9.81□□□□□ -0.84
COL27A1-202ENST00000451716 NIT1Q86X76 327 aa9.81□□□□□ -0.84
COL27A1-202ENST00000451716 BOD1L2Q8IYS8 172 aa9.81□□□□□ -0.84
COL27A1-202ENST00000451716 OR10X1Q8NGY0 326 aa9.81□□□□□ -0.84
COL27A1-202ENST00000451716 HARBI1Q96MB7 349 aa9.81□□□□□ -0.84
COL27A1-202ENST00000451716 PLEKHA3Q9HB20 300 aa9.81□□□□□ -0.84
COL27A1-202ENST00000451716 MANBALQ9NQG1 85 aa9.81□□□□□ -0.84
COL27A1-202ENST00000451716 LSM4Q9Y4Z0 139 aaKnown RBP9.81□□□□□ -0.84
COL27A1-202ENST00000451716 ABCA1O95477 2261 aa9.81□□□□□ -0.84
COL27A1-202ENST00000451716 TEX50A0A1B0GTY4 177 aa9.8□□□□□ -0.84
COL27A1-202ENST00000451716 E7EUB6 86 aa9.8□□□□□ -0.84
COL27A1-202ENST00000451716 PAX2Q02962 417 aa9.8□□□□□ -0.84
COL27A1-202ENST00000451716 MEF2CQ06413 473 aaPredicted RBP9.8□□□□□ -0.84
COL27A1-202ENST00000451716 BSXQ3C1V8 233 aa9.8□□□□□ -0.84
COL27A1-202ENST00000451716 LRRC10Q5BKY1 277 aa9.8□□□□□ -0.84
COL27A1-202ENST00000451716 CYP2G1PQ6ZSU1 146 aa9.8□□□□□ -0.84
COL27A1-202ENST00000451716 ZNF833PQ6ZTB9 187 aa9.8□□□□□ -0.84
COL27A1-202ENST00000451716 SPXQ9BT56 116 aa9.8□□□□□ -0.84
COL27A1-202ENST00000451716 H0YJW9 148 aa9.8□□□□□ -0.84
COL27A1-202ENST00000451716 TMEM250H0YL14 139 aa9.8□□□□□ -0.84
COL27A1-202ENST00000451716 MPDU1O75352 247 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms