RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 TFPI2P48307 235 aa11.36□□□□□ -0.59
CHD3-205ENST00000449744 CMC4P56277 68 aaPredicted RBP11.36□□□□□ -0.59
CHD3-205ENST00000449744 ODF3L2Q3SX64 289 aa11.36□□□□□ -0.59
CHD3-205ENST00000449744 PVRIGQ6DKI7 326 aa11.36□□□□□ -0.59
CHD3-205ENST00000449744 TOMM20LQ6UXN7 152 aa11.36□□□□□ -0.59
CHD3-205ENST00000449744 Q6ZRM9 215 aa11.36□□□□□ -0.59
CHD3-205ENST00000449744 OR52E5Q8NH55 327 aa11.36□□□□□ -0.59
CHD3-205ENST00000449744 LHFPL5Q8TAF8 219 aa11.36□□□□□ -0.59
CHD3-205ENST00000449744 ZNF414Q96IQ9 312 aa11.36□□□□□ -0.59
CHD3-205ENST00000449744 CACNG5Q9UF02 275 aa11.36□□□□□ -0.59
CHD3-205ENST00000449744 PUS1Q9Y606 427 aaKnown RBP eCLIP11.36□□□□□ -0.59
CHD3-205ENST00000449744 RPS10-NUDT3A0A1W2PQS6 291 aa11.35□□□□□ -0.59
CHD3-205ENST00000449744 CCDC160A6NGH7 325 aa11.35□□□□□ -0.59
CHD3-205ENST00000449744 HTR2BP41595 481 aa11.35□□□□□ -0.59
CHD3-205ENST00000449744 PAFAH1B2P68402 229 aa11.35□□□□□ -0.59
CHD3-205ENST00000449744 GPR146Q96CH1 333 aa11.35□□□□□ -0.59
CHD3-205ENST00000449744 OVOL2Q9BRP0 275 aa11.35□□□□□ -0.59
CHD3-205ENST00000449744 HEYLQ9NQ87 328 aaPredicted RBP11.35□□□□□ -0.59
CHD3-205ENST00000449744 LCE6AA0A183 80 aa11.34□□□□□ -0.59
CHD3-205ENST00000449744 CEBPZOSA8MTT3 80 aa11.34□□□□□ -0.59
CHD3-205ENST00000449744 UBE2CO00762 179 aa11.34□□□□□ -0.59
CHD3-205ENST00000449744 CLN5O75503 358 aa11.34□□□□□ -0.59
CHD3-205ENST00000449744 CD5P06127 495 aa11.34□□□□□ -0.59
CHD3-205ENST00000449744 FAUP35544 74 aaKnown RBP11.34□□□□□ -0.59
CHD3-205ENST00000449744 TCF24Q7RTU0 167 aa11.34□□□□□ -0.59
CHD3-205ENST00000449744 STPG3Q8N7X2 389 aa11.34□□□□□ -0.59
CHD3-205ENST00000449744 OR4X1Q8NH49 305 aa11.34□□□□□ -0.59
CHD3-205ENST00000449744 GALNT14Q96FL9 552 aa11.34□□□□□ -0.59
CHD3-205ENST00000449744 TMEM231Q9H6L2 316 aa11.34□□□□□ -0.59
CHD3-205ENST00000449744 CACFD1Q9UGQ2 172 aa11.34□□□□□ -0.59
CHD3-205ENST00000449744 TMEM56-RWDD3S4R434 201 aa11.34□□□□□ -0.59
CHD3-205ENST00000449744 TENM2Q9NT68 2774 aa11.34□□□□□ -0.59
CHD3-205ENST00000449744 KIR2DL5BA0A0G2JN68 375 aa11.33□□□□□ -0.6
CHD3-205ENST00000449744 KIR2DL5BA0A0G2JPC4 375 aa11.33□□□□□ -0.6
CHD3-205ENST00000449744 AKR1C4P17516 323 aa11.33□□□□□ -0.6
CHD3-205ENST00000449744 RPL35AP18077 110 aaKnown RBP11.33□□□□□ -0.6
CHD3-205ENST00000449744 RPL11P62913 178 aaKnown RBP11.33□□□□□ -0.6
CHD3-205ENST00000449744 BSXQ3C1V8 233 aa11.33□□□□□ -0.6
CHD3-205ENST00000449744 AARDQ4LEZ3 155 aa11.33□□□□□ -0.6
CHD3-205ENST00000449744 Q6ZWC4 215 aa11.33□□□□□ -0.6
CHD3-205ENST00000449744 APRG1Q8IVJ8 170 aa11.33□□□□□ -0.6
CHD3-205ENST00000449744 KIR2DL5AQ8N109 375 aa11.33□□□□□ -0.6
CHD3-205ENST00000449744 GBGT1Q8N5D6 347 aa11.33□□□□□ -0.6
CHD3-205ENST00000449744 KIR2DL5BQ8NHK3 375 aa11.33□□□□□ -0.6
CHD3-205ENST00000449744 ST8SIA2Q92186 375 aa11.33□□□□□ -0.6
CHD3-205ENST00000449744 IL22RA2Q969J5 263 aa11.33□□□□□ -0.6
CHD3-205ENST00000449744 TMEM230Q96A57 120 aa11.33□□□□□ -0.6
CHD3-205ENST00000449744 SOSTQ9BQB4 213 aa11.33□□□□□ -0.6
CHD3-205ENST00000449744 FNDC4Q9H6D8 234 aaPredicted RBP11.33□□□□□ -0.6
CHD3-205ENST00000449744 ZFAND3Q9H8U3 227 aa11.33□□□□□ -0.6
CHD3-205ENST00000449744 TRAV30A0A087WSZ9 112 aa11.32□□□□□ -0.6
CHD3-205ENST00000449744 IGHV3-66A0A0C4DH42 116 aa11.32□□□□□ -0.6
CHD3-205ENST00000449744 A0A1B0GU03 582 aa11.32□□□□□ -0.6
CHD3-205ENST00000449744 A0A1W2PS18 150 aa11.32□□□□□ -0.6
CHD3-205ENST00000449744 DNASE2O00115 360 aaPredicted RBP11.32□□□□□ -0.6
CHD3-205ENST00000449744 SPRY2O43597 315 aa11.32□□□□□ -0.6
CHD3-205ENST00000449744 NXPH3O95157 252 aa11.32□□□□□ -0.6
CHD3-205ENST00000449744 SULT1A3P0DMM9 295 aa11.32□□□□□ -0.6
CHD3-205ENST00000449744 SULT1A4P0DMN0 295 aa11.32□□□□□ -0.6
CHD3-205ENST00000449744 ANXA3P12429 323 aa11.32□□□□□ -0.6
CHD3-205ENST00000449744 NPPCP23582 126 aa11.32□□□□□ -0.6
CHD3-205ENST00000449744 AP3S2P59780 193 aa11.32□□□□□ -0.6
CHD3-205ENST00000449744 TMEM187Q14656 261 aa11.32□□□□□ -0.6
CHD3-205ENST00000449744 MLANAQ16655 118 aa11.32□□□□□ -0.6
CHD3-205ENST00000449744 DEFB135Q30KP9 77 aa11.32□□□□□ -0.6
CHD3-205ENST00000449744 PYDC2Q56P42 97 aa11.32□□□□□ -0.6
CHD3-205ENST00000449744 FAM90A2PQ658T7 463 aa11.32□□□□□ -0.6
CHD3-205ENST00000449744 WFDC3Q8IUB2 231 aa11.32□□□□□ -0.6
CHD3-205ENST00000449744 SLC24A4Q8NFF2 622 aa11.32□□□□□ -0.6
CHD3-205ENST00000449744 NARS2Q96I59 477 aaKnown RBP11.32□□□□□ -0.6
CHD3-205ENST00000449744 VSIRQ9H7M9 311 aa11.32□□□□□ -0.6
CHD3-205ENST00000449744 MRPL36Q9P0J6 103 aaKnown RBP11.32□□□□□ -0.6
CHD3-205ENST00000449744 TP53TG1Q9Y2A0 90 aa11.32□□□□□ -0.6
CHD3-205ENST00000449744 DFFBO76075 338 aa11.31□□□□□ -0.6
CHD3-205ENST00000449744 APOHP02749 345 aaPredicted RBP11.31□□□□□ -0.6
CHD3-205ENST00000449744 SLC25A4P12235 298 aa11.31□□□□□ -0.6
CHD3-205ENST00000449744 S100A5P33763 92 aa11.31□□□□□ -0.6
CHD3-205ENST00000449744 C2orf83Q53S99 150 aa11.31□□□□□ -0.6
CHD3-205ENST00000449744 NOXA1Q86UR1 476 aa11.31□□□□□ -0.6
CHD3-205ENST00000449744 TOMM5Q8N4H5 51 aa11.31□□□□□ -0.6
CHD3-205ENST00000449744 RNASEH2CQ8TDP1 164 aaKnown RBP11.31□□□□□ -0.6
CHD3-205ENST00000449744 METTL26Q96S19 204 aa11.31□□□□□ -0.6
CHD3-205ENST00000449744 PRR13Q9NZ81 148 aa11.31□□□□□ -0.6
CHD3-205ENST00000449744 A0A0B4J2A0 478 aa11.3□□□□□ -0.6
CHD3-205ENST00000449744 PIGBOS1A0A0B4J2F0 54 aa11.3□□□□□ -0.6
CHD3-205ENST00000449744 JTBO76095 146 aa11.3□□□□□ -0.6
CHD3-205ENST00000449744 SRPXP78539 464 aa11.3□□□□□ -0.6
CHD3-205ENST00000449744 TIGITQ495A1 244 aa11.3□□□□□ -0.6
CHD3-205ENST00000449744 ETFRF1Q6IPR1 90 aa11.3□□□□□ -0.6
CHD3-205ENST00000449744 LGI3Q8N145 548 aa11.3□□□□□ -0.6
CHD3-205ENST00000449744 MAP6D1Q9H9H5 199 aa11.3□□□□□ -0.6
CHD3-205ENST00000449744 SHPKQ9UHJ6 478 aa11.3□□□□□ -0.6
CHD3-205ENST00000449744 DNAH7Q8WXX0 4024 aa11.3□□□□□ -0.6
CHD3-205ENST00000449744 DYNC2H1Q8NCM8 4307 aaKnown RBP11.29□□□□□ -0.6
CHD3-205ENST00000449744 IFNA10P01566 189 aa11.29□□□□□ -0.6
CHD3-205ENST00000449744 NPY1RP25929 384 aa11.29□□□□□ -0.6
CHD3-205ENST00000449744 CCR6P51684 374 aa11.29□□□□□ -0.6
CHD3-205ENST00000449744 RND2P52198 227 aa11.29□□□□□ -0.6
CHD3-205ENST00000449744 SMCO1Q147U7 214 aa11.29□□□□□ -0.6
CHD3-205ENST00000449744 ZNF124Q15973 351 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms