RNA–Protein interactions for RNA: ENST00000448649.1

EXOSC3P1-201, Transcript of exosome component 3 pseudogene 1, humanhuman

BASIC

Gene EXOSC3P1, Length 500 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3P1-201ENST00000448649 MPV17LQ2QL34 196 aa0.37□□□□□ -2.35
EXOSC3P1-201ENST00000448649 LPCAT4Q643R3 524 aa0.37□□□□□ -2.35
EXOSC3P1-201ENST00000448649 LPCAT3Q6P1A2 487 aa0.37□□□□□ -2.35
EXOSC3P1-201ENST00000448649 SOSTDC1Q6X4U4 206 aa0.37□□□□□ -2.35
EXOSC3P1-201ENST00000448649 SIGLECL1Q8N7X8 197 aa0.37□□□□□ -2.35
EXOSC3P1-201ENST00000448649 C4orf3Q8WVX3 66 aa0.37□□□□□ -2.35
EXOSC3P1-201ENST00000448649 COMMD5Q9GZQ3 224 aa0.37□□□□□ -2.35
EXOSC3P1-201ENST00000448649 SLC39A9Q9NUM3 307 aa0.37□□□□□ -2.35
EXOSC3P1-201ENST00000448649 FBXL12Q9NXK8 326 aa0.37□□□□□ -2.35
EXOSC3P1-201ENST00000448649 ZNF106Q9H2Y7 1883 aaKnown RBP0.37□□□□□ -2.35
EXOSC3P1-201ENST00000448649 MUC5ACP98088 5654 aa0.36□□□□□ -2.35
EXOSC3P1-201ENST00000448649 ZFC3H1O60293 1989 aaKnown RBP0.36□□□□□ -2.35
EXOSC3P1-201ENST00000448649 BUB1B-PAK6H3BSN5 160 aa0.36□□□□□ -2.35
EXOSC3P1-201ENST00000448649 LYZL6O75951 148 aa0.36□□□□□ -2.35
EXOSC3P1-201ENST00000448649 PROSCO94903 275 aa0.36□□□□□ -2.35
EXOSC3P1-201ENST00000448649 HLA-DRB1P01911 266 aa0.36□□□□□ -2.35
EXOSC3P1-201ENST00000448649 HIST1H1TP22492 207 aaPredicted RBP0.36□□□□□ -2.35
EXOSC3P1-201ENST00000448649 SNRPD2P62316 118 aaKnown RBP0.36□□□□□ -2.35
EXOSC3P1-201ENST00000448649 TPM4P67936 248 aa0.36□□□□□ -2.35
EXOSC3P1-201ENST00000448649 HIST3H3Q16695 136 aa0.36□□□□□ -2.35
EXOSC3P1-201ENST00000448649 RNASE10Q5GAN6 216 aaKnown RBP0.36□□□□□ -2.35
EXOSC3P1-201ENST00000448649 NIPSNAP1Q9BPW8 284 aa0.36□□□□□ -2.35
EXOSC3P1-201ENST00000448649 PRTFDC1Q9NRG1 225 aa0.36□□□□□ -2.35
EXOSC3P1-201ENST00000448649 SCN3AQ9NY46 2000 aa0.36□□□□□ -2.35
EXOSC3P1-201ENST00000448649 WRNQ14191 1432 aaPredicted RBP eCLIP0.36□□□□□ -2.35
EXOSC3P1-201ENST00000448649 ECM29Q5VYK3 1845 aa0.36□□□□□ -2.35
EXOSC3P1-201ENST00000448649 MDN1Q9NU22 5596 aa0.35□□□□□ -2.35
EXOSC3P1-201ENST00000448649 SBF1O95248 1867 aa0.35□□□□□ -2.35
EXOSC3P1-201ENST00000448649 NUP155O75694 1391 aa0.35□□□□□ -2.35
EXOSC3P1-201ENST00000448649 MTUS2Q5JR59 1369 aa0.35□□□□□ -2.35
EXOSC3P1-201ENST00000448649 SYNE2Q8WXH0 6885 aaKnown RBP0.35□□□□□ -2.35
EXOSC3P1-201ENST00000448649 CNTRLQ7Z7A1 2325 aa0.35□□□□□ -2.35
EXOSC3P1-201ENST00000448649 E9PCH4 1651 aa0.35□□□□□ -2.35
EXOSC3P1-201ENST00000448649 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP0.35□□□□□ -2.35
EXOSC3P1-201ENST00000448649 TGIF2-C20orf24A0A0A6YYL0 155 aa0.35□□□□□ -2.35
EXOSC3P1-201ENST00000448649 PQLC2LA1A4F0 135 aa0.35□□□□□ -2.35
EXOSC3P1-201ENST00000448649 FAAHO00519 579 aa0.35□□□□□ -2.35
EXOSC3P1-201ENST00000448649 CALB1P05937 261 aa0.35□□□□□ -2.35
EXOSC3P1-201ENST00000448649 HIST1H1EP10412 219 aaKnown RBP0.35□□□□□ -2.35
EXOSC3P1-201ENST00000448649 MGST1P10620 155 aaKnown RBP0.35□□□□□ -2.35
EXOSC3P1-201ENST00000448649 COTL1Q14019 142 aa0.35□□□□□ -2.35
EXOSC3P1-201ENST00000448649 C1orf137Q5JT78 98 aa0.35□□□□□ -2.35
EXOSC3P1-201ENST00000448649 HIST3H2BBQ8N257 126 aa0.35□□□□□ -2.35
EXOSC3P1-201ENST00000448649 H1FXQ92522 213 aaKnown RBP0.35□□□□□ -2.35
EXOSC3P1-201ENST00000448649 TOMM6Q96B49 74 aa0.35□□□□□ -2.35
EXOSC3P1-201ENST00000448649 TSPAN32Q96QS1 320 aa0.35□□□□□ -2.35
EXOSC3P1-201ENST00000448649 OR52E6Q96RD3 313 aa0.35□□□□□ -2.35
EXOSC3P1-201ENST00000448649 C11orf68Q9H3H3 251 aaKnown RBP0.35□□□□□ -2.35
EXOSC3P1-201ENST00000448649 C10orf95Q9H7T3 257 aa0.35□□□□□ -2.35
EXOSC3P1-201ENST00000448649 CDC42SE1Q9NRR8 79 aa0.35□□□□□ -2.35
EXOSC3P1-201ENST00000448649 HS3ST2Q9Y278 367 aa0.35□□□□□ -2.35
EXOSC3P1-201ENST00000448649 ERGIC3Q9Y282 383 aa0.35□□□□□ -2.35
EXOSC3P1-201ENST00000448649 NEO1Q92859 1461 aa0.35□□□□□ -2.35
EXOSC3P1-201ENST00000448649 DPRXA6NFQ7 191 aa0.34□□□□□ -2.36
EXOSC3P1-201ENST00000448649 OR2J2O76002 312 aa0.34□□□□□ -2.36
EXOSC3P1-201ENST00000448649 ZNF25P17030 456 aaPredicted RBP0.34□□□□□ -2.36
EXOSC3P1-201ENST00000448649 RPL5P46777 297 aaKnown RBP0.34□□□□□ -2.36
EXOSC3P1-201ENST00000448649 NKX2-5P52952 324 aaPredicted RBP0.34□□□□□ -2.36
EXOSC3P1-201ENST00000448649 RPS20P60866 119 aaKnown RBP0.34□□□□□ -2.36
EXOSC3P1-201ENST00000448649 MAGOHP61326 146 aaKnown RBP0.34□□□□□ -2.36
EXOSC3P1-201ENST00000448649 HIST2H3PS2Q5TEC6 136 aa0.34□□□□□ -2.36
EXOSC3P1-201ENST00000448649 C20orf196Q8IYI0 205 aa0.34□□□□□ -2.36
EXOSC3P1-201ENST00000448649 OR10J5Q8NHC4 309 aa0.34□□□□□ -2.36
EXOSC3P1-201ENST00000448649 PATE1Q8WXA2 126 aa0.34□□□□□ -2.36
EXOSC3P1-201ENST00000448649 PPP1R2P1Q96PQ5 205 aa0.34□□□□□ -2.36
EXOSC3P1-201ENST00000448649 NHP2Q9NX24 153 aaKnown RBP0.34□□□□□ -2.36
EXOSC3P1-201ENST00000448649 GUCA1BQ9UMX6 200 aa0.34□□□□□ -2.36
EXOSC3P1-201ENST00000448649 DENND4CQ5VZ89 1909 aa0.34□□□□□ -2.36
EXOSC3P1-201ENST00000448649 PLXND1Q9Y4D7 1925 aa0.34□□□□□ -2.36
EXOSC3P1-201ENST00000448649 USP24Q9UPU5 2620 aa0.34□□□□□ -2.36
EXOSC3P1-201ENST00000448649 EXOC1LA0A1B0GW35 172 aa0.33□□□□□ -2.36
EXOSC3P1-201ENST00000448649 ZNF736B4DX44 427 aaPredicted RBP0.33□□□□□ -2.36
EXOSC3P1-201ENST00000448649 PSMD12O00232 456 aaPredicted RBP0.33□□□□□ -2.36
EXOSC3P1-201ENST00000448649 IFNA5P01569 189 aa0.33□□□□□ -2.36
EXOSC3P1-201ENST00000448649 CDC42P60953 191 aa0.33□□□□□ -2.36
EXOSC3P1-201ENST00000448649 SPCS3P61009 180 aa0.33□□□□□ -2.36
EXOSC3P1-201ENST00000448649 PSME3P61289 254 aa0.33□□□□□ -2.36
EXOSC3P1-201ENST00000448649 ACOT6Q3I5F7 207 aaPredicted RBP0.33□□□□□ -2.36
EXOSC3P1-201ENST00000448649 C8orf74Q6P047 294 aa0.33□□□□□ -2.36
EXOSC3P1-201ENST00000448649 TEX261Q6UWH6 196 aa0.33□□□□□ -2.36
EXOSC3P1-201ENST00000448649 OR52R1Q8NGF1 315 aa0.33□□□□□ -2.36
EXOSC3P1-201ENST00000448649 DDI1Q8WTU0 396 aa0.33□□□□□ -2.36
EXOSC3P1-201ENST00000448649 MRPS26Q9BYN8 205 aaKnown RBP0.33□□□□□ -2.36
EXOSC3P1-201ENST00000448649 MRPL27Q9P0M9 148 aaKnown RBP0.33□□□□□ -2.36
EXOSC3P1-201ENST00000448649 PKIGQ9Y2B9 76 aa0.33□□□□□ -2.36
EXOSC3P1-201ENST00000448649 TMEM56-RWDD3S4R434 201 aa0.33□□□□□ -2.36
EXOSC3P1-201ENST00000448649 U3KQ87 197 aa0.33□□□□□ -2.36
EXOSC3P1-201ENST00000448649 MED12Q93074 2177 aa0.33□□□□□ -2.36
EXOSC3P1-201ENST00000448649 ROBO3Q96MS0 1386 aa0.32□□□□□ -2.36
EXOSC3P1-201ENST00000448649 DOCK3Q8IZD9 2030 aa0.32□□□□□ -2.36
EXOSC3P1-201ENST00000448649 TRAV9-1A0A075B6T8 112 aa0.32□□□□□ -2.36
EXOSC3P1-201ENST00000448649 CHP2O43745 196 aa0.32□□□□□ -2.36
EXOSC3P1-201ENST00000448649 CD79AP11912 226 aa0.32□□□□□ -2.36
EXOSC3P1-201ENST00000448649 DEFA1P59665 94 aa0.32□□□□□ -2.36
EXOSC3P1-201ENST00000448649 ANKRD29Q8N6D5 301 aa0.32□□□□□ -2.36
EXOSC3P1-201ENST00000448649 C3orf56Q8N813 242 aa0.32□□□□□ -2.36
EXOSC3P1-201ENST00000448649 ITFG2Q969R8 447 aa0.32□□□□□ -2.36
EXOSC3P1-201ENST00000448649 PARD6GQ9BYG4 376 aaPredicted RBP0.32□□□□□ -2.36
EXOSC3P1-201ENST00000448649 C20orf27Q9GZN8 174 aa0.32□□□□□ -2.36
EXOSC3P1-201ENST00000448649 SLC35A3Q9Y2D2 325 aa0.32□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms