RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 OR11H12B2RN74 326 aa15.75■□□□□ 0.11
HMGA1-205ENST00000447654 FNDC10F2Z333 226 aa15.75■□□□□ 0.11
HMGA1-205ENST00000447654 ADH4P08319 380 aa15.75■□□□□ 0.11
HMGA1-205ENST00000447654 FAM87AP0C7U9 286 aa15.75■□□□□ 0.11
HMGA1-205ENST00000447654 ZNF883P0CG24 379 aa15.75■□□□□ 0.11
HMGA1-205ENST00000447654 LINC00173Q6ZV60 143 aa15.75■□□□□ 0.11
HMGA1-205ENST00000447654 BOD1L2Q8IYS8 172 aa15.75■□□□□ 0.11
HMGA1-205ENST00000447654 OR11H1Q8NG94 326 aa15.75■□□□□ 0.11
HMGA1-205ENST00000447654 OR11H2Q8NH07 326 aa15.75■□□□□ 0.11
HMGA1-205ENST00000447654 F8W1H4 67 aa15.74■□□□□ 0.11
HMGA1-205ENST00000447654 TSPAN13O95857 204 aa15.74■□□□□ 0.11
HMGA1-205ENST00000447654 UQCRFS1P47985 274 aa15.74■□□□□ 0.11
HMGA1-205ENST00000447654 SPATA31B1PQ5VZV4 182 aa15.74■□□□□ 0.11
HMGA1-205ENST00000447654 TEPPQ6URK8 271 aa15.74■□□□□ 0.11
HMGA1-205ENST00000447654 MRPL21Q7Z2W9 205 aaKnown RBP15.74■□□□□ 0.11
HMGA1-205ENST00000447654 GGNQ86UU5 652 aa15.74■□□□□ 0.11
HMGA1-205ENST00000447654 C19orf24Q9BVV8 132 aa15.74■□□□□ 0.11
HMGA1-205ENST00000447654 GEMIN7Q9H840 131 aaKnown RBP15.74■□□□□ 0.11
HMGA1-205ENST00000447654 RABAC1Q9UI14 185 aa15.74■□□□□ 0.11
HMGA1-205ENST00000447654 TNRC6AQ8NDV7 1962 aaKnown RBP15.74■□□□□ 0.11
HMGA1-205ENST00000447654 FOXH1O75593 365 aa15.73■□□□□ 0.11
HMGA1-205ENST00000447654 CCNOP22674 350 aa15.73■□□□□ 0.11
HMGA1-205ENST00000447654 MEF2CQ06413 473 aaPredicted RBP15.73■□□□□ 0.11
HMGA1-205ENST00000447654 PSG5Q15238 335 aa15.73■□□□□ 0.11
HMGA1-205ENST00000447654 TMEM164Q5U3C3 297 aa15.73■□□□□ 0.11
HMGA1-205ENST00000447654 ZNF788Q6ZQV5 615 aa15.73■□□□□ 0.11
HMGA1-205ENST00000447654 NDFIP1Q9BT67 221 aa15.73■□□□□ 0.11
HMGA1-205ENST00000447654 FAM186AA6NE01 2351 aa15.73■□□□□ 0.11
HMGA1-205ENST00000447654 RPL30P62888 115 aaKnown RBP15.73■□□□□ 0.11
HMGA1-205ENST00000447654 HBBP68871 147 aa15.73■□□□□ 0.11
HMGA1-205ENST00000447654 PRR20EP86478 221 aa15.73■□□□□ 0.11
HMGA1-205ENST00000447654 PRR20CP86479 221 aa15.73■□□□□ 0.11
HMGA1-205ENST00000447654 PRR20DP86480 221 aa15.73■□□□□ 0.11
HMGA1-205ENST00000447654 PRR20BP86481 221 aa15.73■□□□□ 0.11
HMGA1-205ENST00000447654 PRR20AP86496 221 aa15.73■□□□□ 0.11
HMGA1-205ENST00000447654 SPINK14Q6IE38 97 aa15.73■□□□□ 0.11
HMGA1-205ENST00000447654 ADTRPQ96IZ2 230 aa15.73■□□□□ 0.11
HMGA1-205ENST00000447654 MRPL16Q9NX20 251 aaKnown RBP15.73■□□□□ 0.11
HMGA1-205ENST00000447654 TRAPPC2LQ9UL33 140 aa15.73■□□□□ 0.11
HMGA1-205ENST00000447654 R4GN57 208 aa15.73■□□□□ 0.11
HMGA1-205ENST00000447654 A1L4Q6 167 aa15.72■□□□□ 0.11
HMGA1-205ENST00000447654 DNPH1O43598 174 aa15.72■□□□□ 0.11
HMGA1-205ENST00000447654 PLA2G2CQ5R387 149 aa15.72■□□□□ 0.11
HMGA1-205ENST00000447654 SAMD5Q5TGI4 173 aa15.72■□□□□ 0.11
HMGA1-205ENST00000447654 FAM214BQ7L5A3 538 aa15.72■□□□□ 0.11
HMGA1-205ENST00000447654 EP300Q09472 2414 aaPredicted RBP15.72■□□□□ 0.11
HMGA1-205ENST00000447654 SH2D7A6NKC9 451 aaPredicted RBP15.72■□□□□ 0.11
HMGA1-205ENST00000447654 AGFG2O95081 481 aa15.72■□□□□ 0.11
HMGA1-205ENST00000447654 TAS2R45P59539 299 aa15.72■□□□□ 0.11
HMGA1-205ENST00000447654 CEACAM16Q2WEN9 425 aa15.72■□□□□ 0.11
HMGA1-205ENST00000447654 SSX8Q7RTT4 187 aa15.72■□□□□ 0.11
HMGA1-205ENST00000447654 FAM168AQ92567 244 aa15.72■□□□□ 0.11
HMGA1-205ENST00000447654 PKIBQ9C010 78 aa15.72■□□□□ 0.11
HMGA1-205ENST00000447654 HEYLQ9NQ87 328 aaPredicted RBP15.72■□□□□ 0.11
HMGA1-205ENST00000447654 PCNX2A6NKB5 2137 aa15.72■□□□□ 0.11
HMGA1-205ENST00000447654 C17orf98A8MV24 154 aa15.71■□□□□ 0.11
HMGA1-205ENST00000447654 SYNGR1O43759 233 aa15.71■□□□□ 0.11
HMGA1-205ENST00000447654 VDAC2P45880 294 aaPredicted RBP15.71■□□□□ 0.11
HMGA1-205ENST00000447654 Q6P435 159 aa15.71■□□□□ 0.11
HMGA1-205ENST00000447654 VGLL1Q99990 258 aa15.71■□□□□ 0.11
HMGA1-205ENST00000447654 BOKQ9UMX3 212 aaPredicted RBP15.71■□□□□ 0.11
HMGA1-205ENST00000447654 CA1P00915 261 aaPredicted RBP15.7■□□□□ 0.1
HMGA1-205ENST00000447654 BRWD1-AS2P59051 145 aa15.7■□□□□ 0.1
HMGA1-205ENST00000447654 SSMEM1Q8WWF3 244 aa15.7■□□□□ 0.1
HMGA1-205ENST00000447654 SNRNP40Q96DI7 357 aaKnown RBP15.7■□□□□ 0.1
HMGA1-205ENST00000447654 PLEKHA3Q9HB20 300 aa15.7■□□□□ 0.1
HMGA1-205ENST00000447654 SPANXB1Q9NS25 103 aaPredicted RBP15.7■□□□□ 0.1
HMGA1-205ENST00000447654 URB1O60287 2271 aaKnown RBP15.7■□□□□ 0.1
HMGA1-205ENST00000447654 ZNF407Q9C0G0 2248 aa15.7■□□□□ 0.1
HMGA1-205ENST00000447654 GGTLC3B5MD39 225 aa15.7■□□□□ 0.1
HMGA1-205ENST00000447654 CT45A6P0DMU7 189 aa15.7■□□□□ 0.1
HMGA1-205ENST00000447654 CT45A5P0DMU8 189 aa15.7■□□□□ 0.1
HMGA1-205ENST00000447654 CT45A7P0DMV0 189 aa15.7■□□□□ 0.1
HMGA1-205ENST00000447654 AESQ08117 197 aa15.7■□□□□ 0.1
HMGA1-205ENST00000447654 LTC4SQ16873 150 aa15.7■□□□□ 0.1
HMGA1-205ENST00000447654 CT45A1Q5HYN5 189 aa15.7■□□□□ 0.1
HMGA1-205ENST00000447654 ADAMTSL5Q6ZMM2 481 aa15.7■□□□□ 0.1
HMGA1-205ENST00000447654 CT45A3Q8NHU0 189 aa15.7■□□□□ 0.1
HMGA1-205ENST00000447654 C1orf159Q96HA4 380 aa15.7■□□□□ 0.1
HMGA1-205ENST00000447654 HSD17B10Q99714 261 aaKnown RBP15.7■□□□□ 0.1
HMGA1-205ENST00000447654 HES7Q9BYE0 225 aa15.7■□□□□ 0.1
HMGA1-205ENST00000447654 ZNF355PQ9NSJ1 428 aa15.7■□□□□ 0.1
HMGA1-205ENST00000447654 FREM1Q5H8C1 2179 aa15.7■□□□□ 0.1
HMGA1-205ENST00000447654 HIGD1CA8MV81 97 aa15.69■□□□□ 0.1
HMGA1-205ENST00000447654 SMAD7O15105 426 aaKnown RBP15.69■□□□□ 0.1
HMGA1-205ENST00000447654 CXCL13O43927 109 aa15.69■□□□□ 0.1
HMGA1-205ENST00000447654 SMIM13P0DJ93 91 aa15.69■□□□□ 0.1
HMGA1-205ENST00000447654 RAC3P60763 192 aa15.69■□□□□ 0.1
HMGA1-205ENST00000447654 GCSAMQ8N6F7 178 aa15.69■□□□□ 0.1
HMGA1-205ENST00000447654 BLNKQ8WV28 456 aa15.69■□□□□ 0.1
HMGA1-205ENST00000447654 SSBP3Q9BWW4 388 aaPredicted RBP15.69■□□□□ 0.1
HMGA1-205ENST00000447654 DNAJC13O75165 2243 aa15.69■□□□□ 0.1
HMGA1-205ENST00000447654 ZNF716A6NP11 495 aa15.69■□□□□ 0.1
HMGA1-205ENST00000447654 NRN1LQ496H8 165 aa15.69■□□□□ 0.1
HMGA1-205ENST00000447654 SPINK9Q5DT21 86 aa15.69■□□□□ 0.1
HMGA1-205ENST00000447654 MIR17HGQ75NE6 70 aa15.69■□□□□ 0.1
HMGA1-205ENST00000447654 FOXB1Q99853 325 aa15.69■□□□□ 0.1
HMGA1-205ENST00000447654 PATE4P0C8F1 98 aa15.68■□□□□ 0.1
HMGA1-205ENST00000447654 CYB561P49447 251 aa15.68■□□□□ 0.1
HMGA1-205ENST00000447654 CAMPP49913 170 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms