RNA–Protein interactions for RNA: ENST00000447608.1

COL11A1-205, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 5

Gene COL11A1, Length 776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-205ENST00000447608 TRAV8-1A0A0A6YYK1 113 aa3.68□□□□□ -1.82
COL11A1-205ENST00000447608 H0YGG7 62 aa3.68□□□□□ -1.82
COL11A1-205ENST00000447608 H3BMM0 161 aa3.68□□□□□ -1.82
COL11A1-205ENST00000447608 NSA2O95478 260 aaKnown RBP3.68□□□□□ -1.82
COL11A1-205ENST00000447608 GUSBP08236 651 aa3.68□□□□□ -1.82
COL11A1-205ENST00000447608 COX6B1P14854 86 aa3.68□□□□□ -1.82
COL11A1-205ENST00000447608 KRTAP10-5P60370 271 aa3.68□□□□□ -1.82
COL11A1-205ENST00000447608 RELAQ04206 551 aa3.68□□□□□ -1.82
COL11A1-205ENST00000447608 APOFQ13790 326 aa3.68□□□□□ -1.82
COL11A1-205ENST00000447608 C4orf22Q6V702 233 aa3.68□□□□□ -1.82
COL11A1-205ENST00000447608 UBE2WQ96B02 151 aa3.68□□□□□ -1.82
COL11A1-205ENST00000447608 SLC22A13Q9Y226 551 aa3.68□□□□□ -1.82
COL11A1-205ENST00000447608 POLQO75417 2590 aa3.67□□□□□ -1.82
COL11A1-205ENST00000447608 EXPH5Q8NEV8 1989 aa3.67□□□□□ -1.82
COL11A1-205ENST00000447608 DNHD1Q96M86 4753 aa3.67□□□□□ -1.82
COL11A1-205ENST00000447608 A0A0B4J2C4 111 aa3.67□□□□□ -1.82
COL11A1-205ENST00000447608 LRCOL1A6NCL2 159 aa3.67□□□□□ -1.82
COL11A1-205ENST00000447608 DEDDO75618 318 aa3.67□□□□□ -1.82
COL11A1-205ENST00000447608 STK16O75716 305 aa3.67□□□□□ -1.82
COL11A1-205ENST00000447608 MPC1LP0DKB6 136 aa3.67□□□□□ -1.82
COL11A1-205ENST00000447608 CDK2P24941 298 aa3.67□□□□□ -1.82
COL11A1-205ENST00000447608 OR1E2P47887 323 aa3.67□□□□□ -1.82
COL11A1-205ENST00000447608 CTBP2P56545 445 aa3.67□□□□□ -1.82
COL11A1-205ENST00000447608 RANP62826 216 aaKnown RBP3.67□□□□□ -1.82
COL11A1-205ENST00000447608 SARNPP82979 210 aaKnown RBP3.67□□□□□ -1.82
COL11A1-205ENST00000447608 TSPAN31Q12999 210 aa3.67□□□□□ -1.82
COL11A1-205ENST00000447608 OR2F1Q13607 317 aa3.67□□□□□ -1.82
COL11A1-205ENST00000447608 ACSBG2Q5FVE4 666 aa3.67□□□□□ -1.82
COL11A1-205ENST00000447608 SFXN4Q6P4A7 337 aa3.67□□□□□ -1.82
COL11A1-205ENST00000447608 ZNF615Q8N8J6 731 aa3.67□□□□□ -1.82
COL11A1-205ENST00000447608 CD200R1Q8TD46 325 aa3.67□□□□□ -1.82
COL11A1-205ENST00000447608 C1orf54Q8WWF1 131 aa3.67□□□□□ -1.82
COL11A1-205ENST00000447608 KIFC1Q9BW19 673 aa3.67□□□□□ -1.82
COL11A1-205ENST00000447608 PCBD2Q9H0N5 130 aa3.67□□□□□ -1.82
COL11A1-205ENST00000447608 IL20Q9NYY1 176 aa3.67□□□□□ -1.82
COL11A1-205ENST00000447608 EMC3Q9P0I2 261 aa3.67□□□□□ -1.82
COL11A1-205ENST00000447608 RPUSD1Q9UJJ7 312 aaKnown RBP3.67□□□□□ -1.82
COL11A1-205ENST00000447608 MRPS16Q9Y3D3 137 aaKnown RBP3.67□□□□□ -1.82
COL11A1-205ENST00000447608 CCDC168Q8NDH2 2452 aa3.66□□□□□ -1.82
COL11A1-205ENST00000447608 ZNF469Q96JG9 3925 aaPredicted RBP3.66□□□□□ -1.82
COL11A1-205ENST00000447608 ZNF860A6NHJ4 632 aa3.66□□□□□ -1.82
COL11A1-205ENST00000447608 H3BQ85 93 aa3.66□□□□□ -1.82
COL11A1-205ENST00000447608 STATHP02808 62 aa3.66□□□□□ -1.82
COL11A1-205ENST00000447608 C8GP07360 202 aa3.66□□□□□ -1.82
COL11A1-205ENST00000447608 PFN1P07737 140 aaKnown RBP3.66□□□□□ -1.82
COL11A1-205ENST00000447608 CTLA4P16410 223 aa3.66□□□□□ -1.82
COL11A1-205ENST00000447608 ZNF32P17041 273 aa3.66□□□□□ -1.82
COL11A1-205ENST00000447608 DDTP30046 118 aa3.66□□□□□ -1.82
COL11A1-205ENST00000447608 RPL22P35268 128 aaKnown RBP3.66□□□□□ -1.82
COL11A1-205ENST00000447608 OMPP47874 163 aa3.66□□□□□ -1.82
COL11A1-205ENST00000447608 HMGN2P46Q86SG4 172 aa3.66□□□□□ -1.82
COL11A1-205ENST00000447608 OR51D1Q8NGF3 324 aa3.66□□□□□ -1.82
COL11A1-205ENST00000447608 TSLPQ969D9 159 aa3.66□□□□□ -1.82
COL11A1-205ENST00000447608 TMEM109Q9BVC6 243 aa3.66□□□□□ -1.82
COL11A1-205ENST00000447608 SCRT1Q9BWW7 348 aa3.66□□□□□ -1.82
COL11A1-205ENST00000447608 HES4Q9HCC6 221 aa3.66□□□□□ -1.82
COL11A1-205ENST00000447608 SLC2A9Q9NRM0 540 aa3.66□□□□□ -1.82
COL11A1-205ENST00000447608 LSM5Q9Y4Y9 91 aaKnown RBP3.66□□□□□ -1.82
COL11A1-205ENST00000447608 U3KQK5 164 aa3.66□□□□□ -1.82
COL11A1-205ENST00000447608 ZFHX3Q15911 3703 aa3.66□□□□□ -1.82
COL11A1-205ENST00000447608 VPS13CQ709C8 3753 aa3.66□□□□□ -1.82
COL11A1-205ENST00000447608 CNTRLQ7Z7A1 2325 aa3.65□□□□□ -1.82
COL11A1-205ENST00000447608 SCN3AQ9NY46 2000 aa3.65□□□□□ -1.82
COL11A1-205ENST00000447608 C19orf84I3L1E1 186 aa3.65□□□□□ -1.83
COL11A1-205ENST00000447608 EEF1E1O43324 174 aaKnown RBP3.65□□□□□ -1.83
COL11A1-205ENST00000447608 PRPS1L1P21108 318 aa3.65□□□□□ -1.83
COL11A1-205ENST00000447608 CRABP2P29373 138 aa3.65□□□□□ -1.83
COL11A1-205ENST00000447608 S100A5P33763 92 aa3.65□□□□□ -1.83
COL11A1-205ENST00000447608 PPP1CCP36873 323 aaKnown RBP3.65□□□□□ -1.83
COL11A1-205ENST00000447608 SLCO1A2P46721 670 aa3.65□□□□□ -1.83
COL11A1-205ENST00000447608 DAPP51397 102 aa3.65□□□□□ -1.83
COL11A1-205ENST00000447608 OR4D2P58180 307 aa3.65□□□□□ -1.83
COL11A1-205ENST00000447608 ERVS71-1P61550 626 aa3.65□□□□□ -1.83
COL11A1-205ENST00000447608 EMX1Q04741 257 aaPredicted RBP3.65□□□□□ -1.83
COL11A1-205ENST00000447608 LRP11Q86VZ4 500 aa3.65□□□□□ -1.83
COL11A1-205ENST00000447608 TBC1D19Q8N5T2 526 aa3.65□□□□□ -1.83
COL11A1-205ENST00000447608 PRAP1Q96NZ9 151 aa3.65□□□□□ -1.83
COL11A1-205ENST00000447608 LINC00588Q9Y4M8 146 aa3.65□□□□□ -1.83
COL11A1-205ENST00000447608 SETD2Q9BYW2 2564 aaPredicted RBP3.65□□□□□ -1.83
COL11A1-205ENST00000447608 PKDREJQ9NTG1 2253 aa3.65□□□□□ -1.83
COL11A1-205ENST00000447608 MYO7BQ6PIF6 2116 aa3.65□□□□□ -1.83
COL11A1-205ENST00000447608 ANKHD1Q8IWZ3 2542 aaKnown RBP3.65□□□□□ -1.83
COL11A1-205ENST00000447608 FLNAP21333 2647 aaKnown RBP3.64□□□□□ -1.83
COL11A1-205ENST00000447608 ITPR3Q14573 2671 aa3.64□□□□□ -1.83
COL11A1-205ENST00000447608 EML6Q6ZMW3 1958 aa3.64□□□□□ -1.83
COL11A1-205ENST00000447608 IGKV3D-11A0A0A0MRZ8 115 aa3.64□□□□□ -1.83
COL11A1-205ENST00000447608 M0R381 172 aa3.64□□□□□ -1.83
COL11A1-205ENST00000447608 PSMD12O00232 456 aaPredicted RBP3.64□□□□□ -1.83
COL11A1-205ENST00000447608 IGKV3-11P04433 115 aa3.64□□□□□ -1.83
COL11A1-205ENST00000447608 SULT1A1P50225 295 aa3.64□□□□□ -1.83
COL11A1-205ENST00000447608 IDH3GP51553 393 aaPredicted RBP3.64□□□□□ -1.83
COL11A1-205ENST00000447608 KLF3P57682 345 aaPredicted RBP3.64□□□□□ -1.83
COL11A1-205ENST00000447608 HIST3H3Q16695 136 aa3.64□□□□□ -1.83
COL11A1-205ENST00000447608 DEFB134Q4QY38 66 aa3.64□□□□□ -1.83
COL11A1-205ENST00000447608 AGTRAPQ6RW13 159 aa3.64□□□□□ -1.83
COL11A1-205ENST00000447608 SPINT4Q6UDR6 99 aa3.64□□□□□ -1.83
COL11A1-205ENST00000447608 RPS19BP1Q86WX3 136 aaKnown RBP3.64□□□□□ -1.83
COL11A1-205ENST00000447608 NIT1Q86X76 327 aa3.64□□□□□ -1.83
COL11A1-205ENST00000447608 C3orf22Q8N5N4 141 aa3.64□□□□□ -1.83
COL11A1-205ENST00000447608 PLPP5Q8NEB5 264 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms