RNA–Protein interactions for RNA: ENST00000447041.6

COL9A1-205, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 4

Gene COL9A1, Length 690 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-205ENST00000447041 DFFBO76075 338 aa13.37□□□□□ -0.27
COL9A1-205ENST00000447041 ATF4P18848 351 aaPredicted RBP13.37□□□□□ -0.27
COL9A1-205ENST00000447041 OPRK1P41145 380 aa13.37□□□□□ -0.27
COL9A1-205ENST00000447041 PAFAH1B2P68402 229 aa13.37□□□□□ -0.27
COL9A1-205ENST00000447041 Q6ZRM9 215 aa13.37□□□□□ -0.27
COL9A1-205ENST00000447041 FAM24BQ8N5W8 94 aa13.37□□□□□ -0.27
COL9A1-205ENST00000447041 RRNAD1Q96FB5 475 aaKnown RBP13.37□□□□□ -0.27
COL9A1-205ENST00000447041 MS4A6AQ9H2W1 248 aa13.37□□□□□ -0.27
COL9A1-205ENST00000447041 ENY2Q9NPA8 101 aa13.37□□□□□ -0.27
COL9A1-205ENST00000447041 OR5AC1P0C628 307 aa13.36□□□□□ -0.27
COL9A1-205ENST00000447041 SUB1P53999 127 aaKnown RBP eCLIP13.36□□□□□ -0.27
COL9A1-205ENST00000447041 CMC4P56277 68 aaPredicted RBP13.36□□□□□ -0.27
COL9A1-205ENST00000447041 SPCS2Q15005 226 aa13.36□□□□□ -0.27
COL9A1-205ENST00000447041 MLANAQ16655 118 aa13.36□□□□□ -0.27
COL9A1-205ENST00000447041 BSXQ3C1V8 233 aa13.36□□□□□ -0.27
COL9A1-205ENST00000447041 LEMD1Q68G75 181 aa13.36□□□□□ -0.27
COL9A1-205ENST00000447041 LHFPL5Q8TAF8 219 aa13.36□□□□□ -0.27
COL9A1-205ENST00000447041 C15orf40Q8WUR7 153 aa13.36□□□□□ -0.27
COL9A1-205ENST00000447041 DNASE2O00115 360 aaPredicted RBP13.35□□□□□ -0.27
COL9A1-205ENST00000447041 CTDSP2O14595 271 aa13.35□□□□□ -0.27
COL9A1-205ENST00000447041 CLN5O75503 358 aa13.35□□□□□ -0.27
COL9A1-205ENST00000447041 CD5P06127 495 aa13.35□□□□□ -0.27
COL9A1-205ENST00000447041 DEFB131AP59861 70 aa13.35□□□□□ -0.27
COL9A1-205ENST00000447041 TMEM217Q8N7C4 229 aa13.35□□□□□ -0.27
COL9A1-205ENST00000447041 RTBDNQ9BSG5 229 aaPredicted RBP13.35□□□□□ -0.27
COL9A1-205ENST00000447041 TMEM222Q9H0R3 208 aa13.35□□□□□ -0.27
COL9A1-205ENST00000447041 KMT2AQ03164 3969 aa13.35□□□□□ -0.27
COL9A1-205ENST00000447041 B3GALNT1O75752 331 aa13.34□□□□□ -0.27
COL9A1-205ENST00000447041 CDS2O95674 445 aa13.34□□□□□ -0.27
COL9A1-205ENST00000447041 CA1P00915 261 aaPredicted RBP13.34□□□□□ -0.27
COL9A1-205ENST00000447041 RPL11P62913 178 aaKnown RBP13.34□□□□□ -0.27
COL9A1-205ENST00000447041 GPR141Q7Z602 305 aa13.34□□□□□ -0.27
COL9A1-205ENST00000447041 OR4X1Q8NH49 305 aa13.34□□□□□ -0.27
COL9A1-205ENST00000447041 GLYATL2Q8WU03 294 aa13.34□□□□□ -0.27
COL9A1-205ENST00000447041 GATAD1Q8WUU5 269 aa13.34□□□□□ -0.27
COL9A1-205ENST00000447041 RARRES2Q99969 163 aa13.34□□□□□ -0.27
COL9A1-205ENST00000447041 MRPS26Q9BYN8 205 aaKnown RBP13.34□□□□□ -0.27
COL9A1-205ENST00000447041 NAA60Q9H7X0 242 aa13.34□□□□□ -0.27
COL9A1-205ENST00000447041 C14orf166Q9Y224 244 aaKnown RBP13.34□□□□□ -0.27
COL9A1-205ENST00000447041 RPL5P46777 297 aaKnown RBP13.33□□□□□ -0.28
COL9A1-205ENST00000447041 ALDH3B2P48448 385 aa13.33□□□□□ -0.28
COL9A1-205ENST00000447041 SPCS3P61009 180 aa13.33□□□□□ -0.28
COL9A1-205ENST00000447041 MRPS10P82664 201 aaKnown RBP13.33□□□□□ -0.28
COL9A1-205ENST00000447041 SSBP1Q04837 148 aaKnown RBP13.33□□□□□ -0.28
COL9A1-205ENST00000447041 MEF2DQ14814 521 aa13.33□□□□□ -0.28
COL9A1-205ENST00000447041 TIGITQ495A1 244 aa13.33□□□□□ -0.28
COL9A1-205ENST00000447041 AARDQ4LEZ3 155 aa13.33□□□□□ -0.28
COL9A1-205ENST00000447041 FAM219AQ8IW50 185 aa13.33□□□□□ -0.28
COL9A1-205ENST00000447041 OR4C16Q8NGL9 310 aa13.33□□□□□ -0.28
COL9A1-205ENST00000447041 PHLDA1Q8WV24 401 aaPredicted RBP13.33□□□□□ -0.28
COL9A1-205ENST00000447041 SMIM4Q8WVI0 70 aa13.33□□□□□ -0.28
COL9A1-205ENST00000447041 TMEM231Q9H6L2 316 aa13.33□□□□□ -0.28
COL9A1-205ENST00000447041 RABAC1Q9UI14 185 aa13.33□□□□□ -0.28
COL9A1-205ENST00000447041 KLK5Q9Y337 293 aaPredicted RBP13.33□□□□□ -0.28
COL9A1-205ENST00000447041 TRAV2A0A0B4J234 112 aa13.32□□□□□ -0.28
COL9A1-205ENST00000447041 TEX13DA0A0J9YY54 714 aaPredicted RBP13.32□□□□□ -0.28
COL9A1-205ENST00000447041 IGKV1-17P01599 117 aa13.32□□□□□ -0.28
COL9A1-205ENST00000447041 NPPCP23582 126 aa13.32□□□□□ -0.28
COL9A1-205ENST00000447041 SELENOHQ8IZQ5 122 aaKnown RBP13.32□□□□□ -0.28
COL9A1-205ENST00000447041 OR11H2Q8NH07 326 aa13.32□□□□□ -0.28
COL9A1-205ENST00000447041 RBPMSQ93062 196 aaKnown RBP13.32□□□□□ -0.28
COL9A1-205ENST00000447041 GPR146Q96CH1 333 aa13.32□□□□□ -0.28
COL9A1-205ENST00000447041 METTL26Q96S19 204 aa13.32□□□□□ -0.28
COL9A1-205ENST00000447041 CACNG5Q9UF02 275 aa13.32□□□□□ -0.28
COL9A1-205ENST00000447041 FRAS1Q86XX4 4008 aa13.31□□□□□ -0.28
COL9A1-205ENST00000447041 CRYM-AS1A6NIL9 109 aa13.31□□□□□ -0.28
COL9A1-205ENST00000447041 DISC1C4P0D8 188 aa13.31□□□□□ -0.28
COL9A1-205ENST00000447041 CRYBB3P26998 211 aa13.31□□□□□ -0.28
COL9A1-205ENST00000447041 P2RY1P47900 373 aa13.31□□□□□ -0.28
COL9A1-205ENST00000447041 IL18Q14116 193 aa13.31□□□□□ -0.28
COL9A1-205ENST00000447041 SURF2Q15527 256 aaPredicted RBP13.31□□□□□ -0.28
COL9A1-205ENST00000447041 TMEM268Q5VZI3 342 aa13.31□□□□□ -0.28
COL9A1-205ENST00000447041 STXBP6Q8NFX7 210 aa13.31□□□□□ -0.28
COL9A1-205ENST00000447041 OR52E5Q8NH55 327 aa13.31□□□□□ -0.28
COL9A1-205ENST00000447041 TMEM230Q96A57 120 aa13.31□□□□□ -0.28
COL9A1-205ENST00000447041 C11orf68Q9H3H3 251 aaKnown RBP13.31□□□□□ -0.28
COL9A1-205ENST00000447041 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.31□□□□□ -0.28
COL9A1-205ENST00000447041 GPR132Q9UNW8 380 aa13.31□□□□□ -0.28
COL9A1-205ENST00000447041 A0A1W2PS18 150 aa13.3□□□□□ -0.28
COL9A1-205ENST00000447041 DEFB4AO15263 64 aa13.3□□□□□ -0.28
COL9A1-205ENST00000447041 SCGB2A1O75556 95 aa13.3□□□□□ -0.28
COL9A1-205ENST00000447041 NXPH3O95157 252 aa13.3□□□□□ -0.28
COL9A1-205ENST00000447041 AKAIN1P0CW23 69 aa13.3□□□□□ -0.28
COL9A1-205ENST00000447041 HTR2BP41595 481 aa13.3□□□□□ -0.28
COL9A1-205ENST00000447041 NANOS2P60321 138 aaKnown RBP13.3□□□□□ -0.28
COL9A1-205ENST00000447041 DIRAS2Q96HU8 199 aa13.3□□□□□ -0.28
COL9A1-205ENST00000447041 HEYLQ9NQ87 328 aaPredicted RBP13.3□□□□□ -0.28
COL9A1-205ENST00000447041 PRR13Q9NZ81 148 aa13.3□□□□□ -0.28
COL9A1-205ENST00000447041 RPS10-NUDT3A0A1W2PQS6 291 aa13.29□□□□□ -0.28
COL9A1-205ENST00000447041 K7EQG2 157 aa13.29□□□□□ -0.28
COL9A1-205ENST00000447041 CTDSPLO15194 276 aa13.29□□□□□ -0.28
COL9A1-205ENST00000447041 IGLC1P0CG04 106 aa13.29□□□□□ -0.28
COL9A1-205ENST00000447041 RND2P52198 227 aa13.29□□□□□ -0.28
COL9A1-205ENST00000447041 DHODHQ02127 395 aa13.29□□□□□ -0.28
COL9A1-205ENST00000447041 TMEM187Q14656 261 aa13.29□□□□□ -0.28
COL9A1-205ENST00000447041 RBMS2Q15434 407 aaKnown RBP13.29□□□□□ -0.28
COL9A1-205ENST00000447041 C2orf83Q53S99 150 aa13.29□□□□□ -0.28
COL9A1-205ENST00000447041 PRSS54Q6PEW0 395 aa13.29□□□□□ -0.28
COL9A1-205ENST00000447041 CLVS1Q8IUQ0 354 aaPredicted RBP13.29□□□□□ -0.28
COL9A1-205ENST00000447041 STHQ8IWL8 128 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms