RNA–Protein interactions for RNA: ENST00000444621.1

HLA-F-221, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 495 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-221ENST00000444621 GPR146Q96CH1 333 aa8.37□□□□□ -1.07
HLA-F-221ENST00000444621 RBM38Q9H0Z9 239 aaKnown RBP8.37□□□□□ -1.07
HLA-F-221ENST00000444621 V9GYH0 126 aa8.37□□□□□ -1.07
HLA-F-221ENST00000444621 TRAV14DV4A0A0A6YYC5 116 aa8.36□□□□□ -1.07
HLA-F-221ENST00000444621 A0A0B4J2A0 478 aa8.36□□□□□ -1.07
HLA-F-221ENST00000444621 DUXBA0A1W2PPF3 345 aa8.36□□□□□ -1.07
HLA-F-221ENST00000444621 ZNF785A8K8V0 405 aa8.36□□□□□ -1.07
HLA-F-221ENST00000444621 SCAF4O95104 1147 aaKnown RBP8.36□□□□□ -1.07
HLA-F-221ENST00000444621 CTSGP08311 255 aa8.36□□□□□ -1.07
HLA-F-221ENST00000444621 VAMP1P23763 118 aa8.36□□□□□ -1.07
HLA-F-221ENST00000444621 PAFAH1B2P68402 229 aa8.36□□□□□ -1.07
HLA-F-221ENST00000444621 SMCO1Q147U7 214 aa8.36□□□□□ -1.07
HLA-F-221ENST00000444621 RBMS2Q15434 407 aaKnown RBP8.36□□□□□ -1.07
HLA-F-221ENST00000444621 BTNL8Q6UX41 500 aa8.36□□□□□ -1.07
HLA-F-221ENST00000444621 ADAMTSL5Q6ZMM2 481 aa8.36□□□□□ -1.07
HLA-F-221ENST00000444621 TMEM116Q8NCL8 245 aa8.36□□□□□ -1.07
HLA-F-221ENST00000444621 OR1S1Q8NH92 325 aa8.36□□□□□ -1.07
HLA-F-221ENST00000444621 TMEM230Q96A57 120 aa8.36□□□□□ -1.07
HLA-F-221ENST00000444621 WDR89Q96FK6 387 aaPredicted RBP8.36□□□□□ -1.07
HLA-F-221ENST00000444621 NARS2Q96I59 477 aaKnown RBP8.36□□□□□ -1.07
HLA-F-221ENST00000444621 RCHY1Q96PM5 261 aa8.36□□□□□ -1.07
HLA-F-221ENST00000444621 SPATA25Q9BR10 227 aa8.36□□□□□ -1.07
HLA-F-221ENST00000444621 CHRDL1Q9BU40 450 aa8.36□□□□□ -1.07
HLA-F-221ENST00000444621 TMEM231Q9H6L2 316 aa8.36□□□□□ -1.07
HLA-F-221ENST00000444621 C19orf73Q9NVV2 129 aa8.36□□□□□ -1.07
HLA-F-221ENST00000444621 MLXQ9UH92 298 aa8.36□□□□□ -1.07
HLA-F-221ENST00000444621 SHPKQ9UHJ6 478 aa8.36□□□□□ -1.07
HLA-F-221ENST00000444621 A0A1B0GU03 582 aa8.35□□□□□ -1.07
HLA-F-221ENST00000444621 OR4C46A6NHA9 309 aa8.35□□□□□ -1.07
HLA-F-221ENST00000444621 IFNA10P01566 189 aa8.35□□□□□ -1.07
HLA-F-221ENST00000444621 RNASE2P10153 161 aaKnown RBP8.35□□□□□ -1.07
HLA-F-221ENST00000444621 SLC25A4P12235 298 aa8.35□□□□□ -1.07
HLA-F-221ENST00000444621 ATP5IP56385 69 aaPredicted RBP8.35□□□□□ -1.07
HLA-F-221ENST00000444621 CNPY1Q3B7I2 92 aa8.35□□□□□ -1.07
HLA-F-221ENST00000444621 ZNF600Q6ZNG1 722 aa8.35□□□□□ -1.07
HLA-F-221ENST00000444621 Q6ZRM9 215 aa8.35□□□□□ -1.07
HLA-F-221ENST00000444621 TMEM61Q8N0U2 210 aa8.35□□□□□ -1.07
HLA-F-221ENST00000444621 CENPSQ8N2Z9 138 aa8.35□□□□□ -1.07
HLA-F-221ENST00000444621 LHFPL5Q8TAF8 219 aa8.35□□□□□ -1.07
HLA-F-221ENST00000444621 RNASEH2CQ8TDP1 164 aaKnown RBP8.35□□□□□ -1.07
HLA-F-221ENST00000444621 TRIM63Q969Q1 353 aa8.35□□□□□ -1.07
HLA-F-221ENST00000444621 SPAG8Q99932 426 aaPredicted RBP8.35□□□□□ -1.07
HLA-F-221ENST00000444621 C7orf50Q9BRJ6 194 aaKnown RBP8.35□□□□□ -1.07
HLA-F-221ENST00000444621 U3KQ87 197 aa8.35□□□□□ -1.07
HLA-F-221ENST00000444621 A0A0G2JRQ6 117 aa8.34□□□□□ -1.07
HLA-F-221ENST00000444621 IGHV7-4-1A0A0J9YVY3 117 aa8.34□□□□□ -1.07
HLA-F-221ENST00000444621 A0A1W2PS18 150 aa8.34□□□□□ -1.07
HLA-F-221ENST00000444621 ZNF207O43670 478 aaKnown RBP8.34□□□□□ -1.07
HLA-F-221ENST00000444621 MED6O75586 246 aa8.34□□□□□ -1.07
HLA-F-221ENST00000444621 TMEM50AO95807 157 aa8.34□□□□□ -1.07
HLA-F-221ENST00000444621 IGHV3-48P01763 117 aa8.34□□□□□ -1.07
HLA-F-221ENST00000444621 ADMP35318 185 aa8.34□□□□□ -1.07
HLA-F-221ENST00000444621 UBE2MP61081 183 aaKnown RBP8.34□□□□□ -1.07
HLA-F-221ENST00000444621 RPP30P78346 268 aaKnown RBP8.34□□□□□ -1.07
HLA-F-221ENST00000444621 ZNF79Q15937 498 aa8.34□□□□□ -1.07
HLA-F-221ENST00000444621 AARDQ4LEZ3 155 aa8.34□□□□□ -1.07
HLA-F-221ENST00000444621 C2orf83Q53S99 150 aa8.34□□□□□ -1.07
HLA-F-221ENST00000444621 ZFAND6Q6FIF0 208 aa8.34□□□□□ -1.07
HLA-F-221ENST00000444621 LYZL2Q7Z4W2 148 aa8.34□□□□□ -1.07
HLA-F-221ENST00000444621 SLC24A4Q8NFF2 622 aa8.34□□□□□ -1.07
HLA-F-221ENST00000444621 SRD5A3Q9H8P0 318 aa8.34□□□□□ -1.07
HLA-F-221ENST00000444621 SMPXQ9UHP9 88 aa8.34□□□□□ -1.07
HLA-F-221ENST00000444621 TMED3Q9Y3Q3 217 aa8.34□□□□□ -1.07
HLA-F-221ENST00000444621 IGHV3OR16-8A0A075B7F1 116 aa8.33□□□□□ -1.08
HLA-F-221ENST00000444621 TSPAN4O14817 238 aa8.33□□□□□ -1.08
HLA-F-221ENST00000444621 CLN5O75503 358 aa8.33□□□□□ -1.08
HLA-F-221ENST00000444621 CD7P09564 240 aa8.33□□□□□ -1.08
HLA-F-221ENST00000444621 EDN2P20800 178 aa8.33□□□□□ -1.08
HLA-F-221ENST00000444621 NPPCP23582 126 aa8.33□□□□□ -1.08
HLA-F-221ENST00000444621 NPY1RP25929 384 aa8.33□□□□□ -1.08
HLA-F-221ENST00000444621 EIF2B2P49770 351 aaKnown RBP8.33□□□□□ -1.08
HLA-F-221ENST00000444621 RAB11AP62491 216 aa8.33□□□□□ -1.08
HLA-F-221ENST00000444621 RPL11P62913 178 aaKnown RBP8.33□□□□□ -1.08
HLA-F-221ENST00000444621 TNFRSF9Q07011 255 aa8.33□□□□□ -1.08
HLA-F-221ENST00000444621 HAGHQ16775 308 aa8.33□□□□□ -1.08
HLA-F-221ENST00000444621 DEFB125Q8N687 156 aa8.33□□□□□ -1.08
HLA-F-221ENST00000444621 OR1S2Q8NGQ3 325 aa8.33□□□□□ -1.08
HLA-F-221ENST00000444621 OR4X1Q8NH49 305 aa8.33□□□□□ -1.08
HLA-F-221ENST00000444621 DTD1Q8TEA8 209 aa8.33□□□□□ -1.08
HLA-F-221ENST00000444621 Q8WTZ3 238 aa8.33□□□□□ -1.08
HLA-F-221ENST00000444621 GRAMD2BQ96HH9 432 aa8.33□□□□□ -1.08
HLA-F-221ENST00000444621 TM2D3Q9BRN9 247 aa8.33□□□□□ -1.08
HLA-F-221ENST00000444621 RHPN1-AS1Q9BWJ2 59 aa8.33□□□□□ -1.08
HLA-F-221ENST00000444621 SRRQ9GZT4 340 aa8.33□□□□□ -1.08
HLA-F-221ENST00000444621 PLECQ15149 4684 aaKnown RBP8.33□□□□□ -1.08
HLA-F-221ENST00000444621 LINC00854A0A1B0GVQ3 168 aa8.32□□□□□ -1.08
HLA-F-221ENST00000444621 F8W735 103 aaPredicted RBP8.32□□□□□ -1.08
HLA-F-221ENST00000444621 DNASE2O00115 360 aaPredicted RBP8.32□□□□□ -1.08
HLA-F-221ENST00000444621 NXPH3O95157 252 aa8.32□□□□□ -1.08
HLA-F-221ENST00000444621 SFT2D2O95562 160 aa8.32□□□□□ -1.08
HLA-F-221ENST00000444621 IFNA21P01568 189 aa8.32□□□□□ -1.08
HLA-F-221ENST00000444621 IFNA4P05014 189 aa8.32□□□□□ -1.08
HLA-F-221ENST00000444621 SLC25A6P12236 298 aa8.32□□□□□ -1.08
HLA-F-221ENST00000444621 SUPT4H1P63272 117 aaKnown RBP8.32□□□□□ -1.08
HLA-F-221ENST00000444621 NMSQ5H8A3 153 aa8.32□□□□□ -1.08
HLA-F-221ENST00000444621 PVRIGQ6DKI7 326 aa8.32□□□□□ -1.08
HLA-F-221ENST00000444621 COQ8AQ8NI60 647 aa8.32□□□□□ -1.08
HLA-F-221ENST00000444621 OR10C1Q96KK4 312 aa8.32□□□□□ -1.08
HLA-F-221ENST00000444621 CIB3Q96Q77 187 aaPredicted RBP8.32□□□□□ -1.08
HLA-F-221ENST00000444621 METTL26Q96S19 204 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms