RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 SCGB1D2O95969 90 aa12.22□□□□□ -0.45
USP39-205ENST00000442708 OPRK1P41145 380 aa12.22□□□□□ -0.45
USP39-205ENST00000442708 PAX9P55771 341 aa12.22□□□□□ -0.45
USP39-205ENST00000442708 KRTAP10-11P60412 298 aa12.22□□□□□ -0.45
USP39-205ENST00000442708 IL15RAQ13261 267 aa12.22□□□□□ -0.45
USP39-205ENST00000442708 TATDN3Q17R31 274 aa12.22□□□□□ -0.45
USP39-205ENST00000442708 KPRPQ5T749 579 aaPredicted RBP12.22□□□□□ -0.45
USP39-205ENST00000442708 GPHB5Q86YW7 130 aa12.22□□□□□ -0.45
USP39-205ENST00000442708 BSCL2Q96G97 398 aaPredicted RBP12.22□□□□□ -0.45
USP39-205ENST00000442708 C2orf50Q96LR7 162 aa12.22□□□□□ -0.45
USP39-205ENST00000442708 ATP6V0BQ99437 205 aa12.22□□□□□ -0.45
USP39-205ENST00000442708 MCRIP2Q9BUT9 160 aaKnown RBP12.22□□□□□ -0.45
USP39-205ENST00000442708 C7orf66A4D0T2 115 aa12.21□□□□□ -0.45
USP39-205ENST00000442708 H3BP45 60 aa12.21□□□□□ -0.45
USP39-205ENST00000442708 FCGR2BP31994 310 aaPredicted RBP12.21□□□□□ -0.45
USP39-205ENST00000442708 UNQ9165/PRO28630Q6UXU0 137 aa12.21□□□□□ -0.45
USP39-205ENST00000442708 ADAMTSL5Q6ZMM2 481 aa12.21□□□□□ -0.45
USP39-205ENST00000442708 OR9G4Q8NGQ1 327 aa12.21□□□□□ -0.45
USP39-205ENST00000442708 RNASEH2CQ8TDP1 164 aaKnown RBP12.21□□□□□ -0.45
USP39-205ENST00000442708 WDR89Q96FK6 387 aaPredicted RBP12.21□□□□□ -0.45
USP39-205ENST00000442708 TXN2Q99757 166 aa12.21□□□□□ -0.45
USP39-205ENST00000442708 ZNF436Q9C0F3 470 aaPredicted RBP12.21□□□□□ -0.45
USP39-205ENST00000442708 ALG5Q9Y673 324 aa12.21□□□□□ -0.45
USP39-205ENST00000442708 GOSR2O14653 212 aa12.2□□□□□ -0.46
USP39-205ENST00000442708 CSN3P07498 182 aa12.2□□□□□ -0.46
USP39-205ENST00000442708 SPANXN5Q5MJ07 72 aa12.2□□□□□ -0.46
USP39-205ENST00000442708 C9orf66Q5T8R8 295 aa12.2□□□□□ -0.46
USP39-205ENST00000442708 PRSS54Q6PEW0 395 aa12.2□□□□□ -0.46
USP39-205ENST00000442708 SPSB3Q6PJ21 355 aa12.2□□□□□ -0.46
USP39-205ENST00000442708 GSG1LQ6UXU4 331 aa12.2□□□□□ -0.46
USP39-205ENST00000442708 HAPLN4Q86UW8 402 aa12.2□□□□□ -0.46
USP39-205ENST00000442708 CIB3Q96Q77 187 aaPredicted RBP12.2□□□□□ -0.46
USP39-205ENST00000442708 DNAH3Q8TD57 4116 aa12.2□□□□□ -0.46
USP39-205ENST00000442708 PRSS46E5RG02 174 aa12.19□□□□□ -0.46
USP39-205ENST00000442708 K7EPK0 472 aa12.19□□□□□ -0.46
USP39-205ENST00000442708 LGALS9O00182 355 aa12.19□□□□□ -0.46
USP39-205ENST00000442708 GNG7O60262 68 aa12.19□□□□□ -0.46
USP39-205ENST00000442708 SAP30O75446 220 aa12.19□□□□□ -0.46
USP39-205ENST00000442708 PRB2P02812 416 aaPredicted RBP12.19□□□□□ -0.46
USP39-205ENST00000442708 IFNA4P05014 189 aa12.19□□□□□ -0.46
USP39-205ENST00000442708 CD69Q07108 199 aa12.19□□□□□ -0.46
USP39-205ENST00000442708 EGFEM1PQ0D2K5 195 aa12.19□□□□□ -0.46
USP39-205ENST00000442708 RGS21Q2M5E4 152 aa12.19□□□□□ -0.46
USP39-205ENST00000442708 REC114Q7Z4M0 266 aa12.19□□□□□ -0.46
USP39-205ENST00000442708 OR4X1Q8NH49 305 aa12.19□□□□□ -0.46
USP39-205ENST00000442708 SMIM8Q96KF7 97 aa12.19□□□□□ -0.46
USP39-205ENST00000442708 C11orf1Q9H5F2 150 aa12.19□□□□□ -0.46
USP39-205ENST00000442708 PSENENQ9NZ42 101 aa12.19□□□□□ -0.46
USP39-205ENST00000442708 IGHV3OR16-8A0A075B7F1 116 aa12.18□□□□□ -0.46
USP39-205ENST00000442708 RPS10-NUDT3A0A1W2PQS6 291 aa12.18□□□□□ -0.46
USP39-205ENST00000442708 ZNF320A2RRD8 509 aa12.18□□□□□ -0.46
USP39-205ENST00000442708 CLN5O75503 358 aa12.18□□□□□ -0.46
USP39-205ENST00000442708 CCNKO75909 580 aa12.18□□□□□ -0.46
USP39-205ENST00000442708 NPBWR1P48145 328 aa12.18□□□□□ -0.46
USP39-205ENST00000442708 RND2P52198 227 aa12.18□□□□□ -0.46
USP39-205ENST00000442708 ATP5IP56385 69 aaPredicted RBP12.18□□□□□ -0.46
USP39-205ENST00000442708 H2BFSP57053 126 aa12.18□□□□□ -0.46
USP39-205ENST00000442708 RAB32Q13637 225 aa12.18□□□□□ -0.46
USP39-205ENST00000442708 OXA1LQ15070 435 aa12.18□□□□□ -0.46
USP39-205ENST00000442708 SLC16A13Q7RTY0 426 aa12.18□□□□□ -0.46
USP39-205ENST00000442708 NOXA1Q86UR1 476 aa12.18□□□□□ -0.46
USP39-205ENST00000442708 TMEM116Q8NCL8 245 aa12.18□□□□□ -0.46
USP39-205ENST00000442708 GAR1Q9NY12 217 aaKnown RBP12.18□□□□□ -0.46
USP39-205ENST00000442708 PAIP2BQ9ULR5 123 aaKnown RBP12.18□□□□□ -0.46
USP39-205ENST00000442708 LSM5Q9Y4Y9 91 aaKnown RBP12.18□□□□□ -0.46
USP39-205ENST00000442708 TMEM213A2RRL7 107 aa12.17□□□□□ -0.46
USP39-205ENST00000442708 C2orf70A6NJV1 201 aa12.17□□□□□ -0.46
USP39-205ENST00000442708 PMS2P5A8MQ11 134 aa12.17□□□□□ -0.46
USP39-205ENST00000442708 NUPL2O15504 423 aaKnown RBP12.17□□□□□ -0.46
USP39-205ENST00000442708 SSNA1O43805 119 aa12.17□□□□□ -0.46
USP39-205ENST00000442708 IGKV1-17P01599 117 aa12.17□□□□□ -0.46
USP39-205ENST00000442708 SLC25A4P12235 298 aa12.17□□□□□ -0.46
USP39-205ENST00000442708 FAM106AQ4KMX7 169 aa12.17□□□□□ -0.46
USP39-205ENST00000442708 TM4SF20Q53R12 229 aa12.17□□□□□ -0.46
USP39-205ENST00000442708 CACNG8Q8WXS5 425 aa12.17□□□□□ -0.46
USP39-205ENST00000442708 TMEM190Q8WZ59 177 aa12.17□□□□□ -0.46
USP39-205ENST00000442708 NPIPB3Q92617 1050 aa12.17□□□□□ -0.46
USP39-205ENST00000442708 RAB40CQ96S21 281 aa12.17□□□□□ -0.46
USP39-205ENST00000442708 ELOVL1Q9BW60 279 aa12.17□□□□□ -0.46
USP39-205ENST00000442708 STRAPQ9Y3F4 350 aaKnown RBP12.17□□□□□ -0.46
USP39-205ENST00000442708 A8MWP6 167 aa12.16□□□□□ -0.46
USP39-205ENST00000442708 NDUFA4O00483 81 aa12.16□□□□□ -0.46
USP39-205ENST00000442708 IGLC1P0CG04 106 aa12.16□□□□□ -0.46
USP39-205ENST00000442708 RAB11AP62491 216 aa12.16□□□□□ -0.46
USP39-205ENST00000442708 GAMTQ14353 236 aa12.16□□□□□ -0.46
USP39-205ENST00000442708 TIGITQ495A1 244 aa12.16□□□□□ -0.46
USP39-205ENST00000442708 TMEM14EPQ6UXP3 125 aa12.16□□□□□ -0.46
USP39-205ENST00000442708 ACY3Q96HD9 319 aa12.16□□□□□ -0.46
USP39-205ENST00000442708 GPR61Q9BZJ8 451 aa12.16□□□□□ -0.46
USP39-205ENST00000442708 MGAT4CQ9UBM8 478 aa12.16□□□□□ -0.46
USP39-205ENST00000442708 SELENOKQ9Y6D0 94 aa12.16□□□□□ -0.46
USP39-205ENST00000442708 ZNF207O43670 478 aaKnown RBP12.15□□□□□ -0.46
USP39-205ENST00000442708 LY86O95711 162 aa12.15□□□□□ -0.46
USP39-205ENST00000442708 IGLV1-51P01701 117 aa12.15□□□□□ -0.46
USP39-205ENST00000442708 FOLR2P14207 255 aa12.15□□□□□ -0.46
USP39-205ENST00000442708 GPX4P36969 197 aaPredicted RBP12.15□□□□□ -0.46
USP39-205ENST00000442708 INSL3P51460 131 aa12.15□□□□□ -0.46
USP39-205ENST00000442708 TAS2R30P59541 319 aa12.15□□□□□ -0.46
USP39-205ENST00000442708 S100A10P60903 97 aa12.15□□□□□ -0.46
USP39-205ENST00000442708 RPP30P78346 268 aaKnown RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms