RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 ZNF320A2RRD8 509 aa11.42□□□□□ -0.58
CSNK1E-210ENST00000442216 SLC25A4P12235 298 aa11.42□□□□□ -0.58
CSNK1E-210ENST00000442216 OPRK1P41145 380 aa11.42□□□□□ -0.58
CSNK1E-210ENST00000442216 DEFA1P59665 94 aa11.42□□□□□ -0.58
CSNK1E-210ENST00000442216 DEFA3P59666 94 aa11.42□□□□□ -0.58
CSNK1E-210ENST00000442216 ETFRF1Q6IPR1 90 aa11.42□□□□□ -0.58
CSNK1E-210ENST00000442216 OR4X1Q8NH49 305 aa11.42□□□□□ -0.58
CSNK1E-210ENST00000442216 ENKURQ8TC29 256 aa11.42□□□□□ -0.58
CSNK1E-210ENST00000442216 TMEM190Q8WZ59 177 aa11.42□□□□□ -0.58
CSNK1E-210ENST00000442216 CIB3Q96Q77 187 aaPredicted RBP11.42□□□□□ -0.58
CSNK1E-210ENST00000442216 FNDC4Q9H6D8 234 aaPredicted RBP11.42□□□□□ -0.58
CSNK1E-210ENST00000442216 ZC4H2Q9NQZ6 224 aa11.42□□□□□ -0.58
CSNK1E-210ENST00000442216 TECRQ9NZ01 308 aaKnown RBP11.42□□□□□ -0.58
CSNK1E-210ENST00000442216 TMEM213A2RRL7 107 aa11.41□□□□□ -0.58
CSNK1E-210ENST00000442216 SYNGR2O43760 224 aa11.41□□□□□ -0.58
CSNK1E-210ENST00000442216 SCGB2A1O75556 95 aa11.41□□□□□ -0.58
CSNK1E-210ENST00000442216 ADAP1O75689 374 aa11.41□□□□□ -0.58
CSNK1E-210ENST00000442216 TMEM50AO95807 157 aa11.41□□□□□ -0.58
CSNK1E-210ENST00000442216 IFNA10P01566 189 aa11.41□□□□□ -0.58
CSNK1E-210ENST00000442216 C8orf88P0DMB2 117 aa11.41□□□□□ -0.58
CSNK1E-210ENST00000442216 FOLR2P14207 255 aa11.41□□□□□ -0.58
CSNK1E-210ENST00000442216 GP9P14770 177 aa11.41□□□□□ -0.58
CSNK1E-210ENST00000442216 SPNP16150 400 aa11.41□□□□□ -0.58
CSNK1E-210ENST00000442216 CBLN1P23435 193 aa11.41□□□□□ -0.58
CSNK1E-210ENST00000442216 ID3Q02535 119 aa11.41□□□□□ -0.58
CSNK1E-210ENST00000442216 LCN12Q6JVE5 192 aa11.41□□□□□ -0.58
CSNK1E-210ENST00000442216 UNQ9165/PRO28630Q6UXU0 137 aa11.41□□□□□ -0.58
CSNK1E-210ENST00000442216 ADAMTSL5Q6ZMM2 481 aa11.41□□□□□ -0.58
CSNK1E-210ENST00000442216 OR52B4Q8NGK2 314 aa11.41□□□□□ -0.58
CSNK1E-210ENST00000442216 ZNF431Q8TF32 576 aaPredicted RBP11.41□□□□□ -0.58
CSNK1E-210ENST00000442216 TMEM170AQ8WVE7 144 aa11.41□□□□□ -0.58
CSNK1E-210ENST00000442216 MRPL27Q9P0M9 148 aaKnown RBP11.41□□□□□ -0.58
CSNK1E-210ENST00000442216 TRAV30A0A087WSZ9 112 aa11.4□□□□□ -0.58
CSNK1E-210ENST00000442216 K7EMT4 169 aa11.4□□□□□ -0.58
CSNK1E-210ENST00000442216 CLN5O75503 358 aa11.4□□□□□ -0.58
CSNK1E-210ENST00000442216 IL5P05113 134 aa11.4□□□□□ -0.58
CSNK1E-210ENST00000442216 RPP30P78346 268 aaKnown RBP11.4□□□□□ -0.58
CSNK1E-210ENST00000442216 OR4D5Q8NGN0 318 aa11.4□□□□□ -0.58
CSNK1E-210ENST00000442216 PRR25Q96S07 402 aa11.4□□□□□ -0.58
CSNK1E-210ENST00000442216 DAZ1Q9NQZ3 744 aaKnown RBP11.4□□□□□ -0.58
CSNK1E-210ENST00000442216 IGHV3-35A0A0C4DH35 117 aa11.39□□□□□ -0.59
CSNK1E-210ENST00000442216 C15orf62A8K5M9 175 aa11.39□□□□□ -0.59
CSNK1E-210ENST00000442216 IGHV3-48P01763 117 aa11.39□□□□□ -0.59
CSNK1E-210ENST00000442216 RAB11AP62491 216 aa11.39□□□□□ -0.59
CSNK1E-210ENST00000442216 DEFB114Q30KQ6 69 aa11.39□□□□□ -0.59
CSNK1E-210ENST00000442216 TMEM116Q8NCL8 245 aa11.39□□□□□ -0.59
CSNK1E-210ENST00000442216 DYNLRB2Q8TF09 96 aa11.39□□□□□ -0.59
CSNK1E-210ENST00000442216 OR10C1Q96KK4 312 aa11.39□□□□□ -0.59
CSNK1E-210ENST00000442216 LSM4Q9Y4Z0 139 aaKnown RBP11.39□□□□□ -0.59
CSNK1E-210ENST00000442216 MPTX1A8MV57 137 aa11.38□□□□□ -0.59
CSNK1E-210ENST00000442216 GPX4P36969 197 aaPredicted RBP11.38□□□□□ -0.59
CSNK1E-210ENST00000442216 NKX2-1P43699 371 aaPredicted RBP11.38□□□□□ -0.59
CSNK1E-210ENST00000442216 CD69Q07108 199 aa11.38□□□□□ -0.59
CSNK1E-210ENST00000442216 MLANAQ16655 118 aa11.38□□□□□ -0.59
CSNK1E-210ENST00000442216 IAH1Q2TAA2 248 aaPredicted RBP11.38□□□□□ -0.59
CSNK1E-210ENST00000442216 TM4SF20Q53R12 229 aa11.38□□□□□ -0.59
CSNK1E-210ENST00000442216 DEFB121Q5J5C9 76 aa11.38□□□□□ -0.59
CSNK1E-210ENST00000442216 PRSS54Q6PEW0 395 aa11.38□□□□□ -0.59
CSNK1E-210ENST00000442216 ZNF600Q6ZNG1 722 aa11.38□□□□□ -0.59
CSNK1E-210ENST00000442216 NRARPQ7Z6K4 114 aa11.38□□□□□ -0.59
CSNK1E-210ENST00000442216 HAPLN4Q86UW8 402 aa11.38□□□□□ -0.59
CSNK1E-210ENST00000442216 C12orf45Q8N5I9 185 aaPredicted RBP11.38□□□□□ -0.59
CSNK1E-210ENST00000442216 UXS1Q8NBZ7 420 aa11.38□□□□□ -0.59
CSNK1E-210ENST00000442216 ZNF414Q96IQ9 312 aa11.38□□□□□ -0.59
CSNK1E-210ENST00000442216 SEC22CQ9BRL7 303 aa11.38□□□□□ -0.59
CSNK1E-210ENST00000442216 GPN1Q9HCN4 374 aaPredicted RBP11.38□□□□□ -0.59
CSNK1E-210ENST00000442216 PRAF2O60831 178 aa11.37□□□□□ -0.59
CSNK1E-210ENST00000442216 IFNA4P05014 189 aa11.37□□□□□ -0.59
CSNK1E-210ENST00000442216 IAPPP10997 89 aa11.37□□□□□ -0.59
CSNK1E-210ENST00000442216 CD300EQ496F6 205 aaPredicted RBP11.37□□□□□ -0.59
CSNK1E-210ENST00000442216 C11orf87Q6NUJ2 197 aa11.37□□□□□ -0.59
CSNK1E-210ENST00000442216 ZBTB8BQ8NAP8 495 aaPredicted RBP11.37□□□□□ -0.59
CSNK1E-210ENST00000442216 OR1S2Q8NGQ3 325 aa11.37□□□□□ -0.59
CSNK1E-210ENST00000442216 CACNG8Q8WXS5 425 aa11.37□□□□□ -0.59
CSNK1E-210ENST00000442216 MAGT1Q9H0U3 335 aa11.37□□□□□ -0.59
CSNK1E-210ENST00000442216 MRPL36Q9P0J6 103 aaKnown RBP11.37□□□□□ -0.59
CSNK1E-210ENST00000442216 TRAV25A0A0B4J276 109 aa11.36□□□□□ -0.59
CSNK1E-210ENST00000442216 SNRPGP15A8MWD9 76 aa11.36□□□□□ -0.59
CSNK1E-210ENST00000442216 WRBO00258 174 aa11.36□□□□□ -0.59
CSNK1E-210ENST00000442216 EDN2P20800 178 aa11.36□□□□□ -0.59
CSNK1E-210ENST00000442216 SLC16A13Q7RTY0 426 aa11.36□□□□□ -0.59
CSNK1E-210ENST00000442216 GINS3Q9BRX5 216 aa11.36□□□□□ -0.59
CSNK1E-210ENST00000442216 MARVELD1Q9BSK0 173 aa11.36□□□□□ -0.59
CSNK1E-210ENST00000442216 C20orf24Q9BUV8 137 aa11.36□□□□□ -0.59
CSNK1E-210ENST00000442216 MLXQ9UH92 298 aa11.36□□□□□ -0.59
CSNK1E-210ENST00000442216 INMT-MINDY4F8WBC2 141 aa11.35□□□□□ -0.59
CSNK1E-210ENST00000442216 YIF1AO95070 293 aa11.35□□□□□ -0.59
CSNK1E-210ENST00000442216 IGKV1-17P01599 117 aa11.35□□□□□ -0.59
CSNK1E-210ENST00000442216 IGLC1P0CG04 106 aa11.35□□□□□ -0.59
CSNK1E-210ENST00000442216 RND2P52198 227 aa11.35□□□□□ -0.59
CSNK1E-210ENST00000442216 YPEL3P61236 119 aaPredicted RBP11.35□□□□□ -0.59
CSNK1E-210ENST00000442216 POLR2GP62487 172 aaKnown RBP eCLIP11.35□□□□□ -0.59
CSNK1E-210ENST00000442216 SMIM8Q96KF7 97 aa11.35□□□□□ -0.59
CSNK1E-210ENST00000442216 RAB40CQ96S21 281 aa11.35□□□□□ -0.59
CSNK1E-210ENST00000442216 STRAPQ9Y3F4 350 aaKnown RBP11.35□□□□□ -0.59
CSNK1E-210ENST00000442216 SMAD5-AS1Q9Y6J3 95 aa11.35□□□□□ -0.59
CSNK1E-210ENST00000442216 DNAH3Q8TD57 4116 aa11.35□□□□□ -0.59
CSNK1E-210ENST00000442216 TRAV14DV4A0A0A6YYC5 116 aa11.34□□□□□ -0.59
CSNK1E-210ENST00000442216 IZUMO1RA6ND01 250 aa11.34□□□□□ -0.59
CSNK1E-210ENST00000442216 ZNF785A8K8V0 405 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms