RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 PRB3Q04118 309 aaPredicted RBP6.55□□□□□ -1.36
CCDC39-201ENST00000442201 ACOT6Q3I5F7 207 aaPredicted RBP6.55□□□□□ -1.36
CCDC39-201ENST00000442201 PNKDQ8N490 385 aa6.55□□□□□ -1.36
CCDC39-201ENST00000442201 CDC42EP3Q9UKI2 254 aa6.55□□□□□ -1.36
CCDC39-201ENST00000442201 NSG2Q9Y328 171 aa6.55□□□□□ -1.36
CCDC39-201ENST00000442201 ARID1AO14497 2285 aa6.55□□□□□ -1.36
CCDC39-201ENST00000442201 P0C879 139 aa6.54□□□□□ -1.36
CCDC39-201ENST00000442201 UNQ5815/PRO19632Q6UWF5 114 aa6.54□□□□□ -1.36
CCDC39-201ENST00000442201 CENPVQ7Z7K6 275 aaPredicted RBP6.54□□□□□ -1.36
CCDC39-201ENST00000442201 NIPSNAP3BQ9BS92 247 aa6.54□□□□□ -1.36
CCDC39-201ENST00000442201 UQCR10Q9UDW1 63 aa6.54□□□□□ -1.36
CCDC39-201ENST00000442201 RBFOX3A6NFN3 312 aa6.54□□□□□ -1.36
CCDC39-201ENST00000442201 BUB1B-PAK6H3BSN5 160 aa6.54□□□□□ -1.36
CCDC39-201ENST00000442201 PFN1P07737 140 aaKnown RBP6.54□□□□□ -1.36
CCDC39-201ENST00000442201 CD1BP29016 333 aa6.54□□□□□ -1.36
CCDC39-201ENST00000442201 OR11H6Q8NGC7 330 aa6.54□□□□□ -1.36
CCDC39-201ENST00000442201 OR4B1Q8NGF8 309 aa6.54□□□□□ -1.36
CCDC39-201ENST00000442201 OR5AN1Q8NGI8 311 aa6.54□□□□□ -1.36
CCDC39-201ENST00000442201 NABP2Q9BQ15 211 aa6.54□□□□□ -1.36
CCDC39-201ENST00000442201 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.54□□□□□ -1.36
CCDC39-201ENST00000442201 RCL1Q9Y2P8 373 aaKnown RBP6.54□□□□□ -1.36
CCDC39-201ENST00000442201 PTPN13Q12923 2485 aa6.54□□□□□ -1.36
CCDC39-201ENST00000442201 RBMXL2O75526 392 aaKnown RBP6.54□□□□□ -1.36
CCDC39-201ENST00000442201 NXPH3O95157 252 aa6.54□□□□□ -1.36
CCDC39-201ENST00000442201 HRASP01112 189 aa6.54□□□□□ -1.36
CCDC39-201ENST00000442201 ESDP10768 282 aa6.54□□□□□ -1.36
CCDC39-201ENST00000442201 FAM3BP58499 235 aaPredicted RBP6.54□□□□□ -1.36
CCDC39-201ENST00000442201 DIAPH2-AS1Q14236 149 aa6.54□□□□□ -1.36
CCDC39-201ENST00000442201 CLEC12BQ2HXU8 276 aa6.54□□□□□ -1.36
CCDC39-201ENST00000442201 OR4P4Q8NGL7 312 aa6.54□□□□□ -1.36
CCDC39-201ENST00000442201 VAMP8Q9BV40 100 aa6.54□□□□□ -1.36
CCDC39-201ENST00000442201 BEX4Q9NWD9 120 aaPredicted RBP6.54□□□□□ -1.36
CCDC39-201ENST00000442201 TACC2O95359 2948 aa6.54□□□□□ -1.36
CCDC39-201ENST00000442201 ZNF705FA8MVS1 300 aaPredicted RBP6.53□□□□□ -1.36
CCDC39-201ENST00000442201 FAM90A26D6RGX4 464 aa6.53□□□□□ -1.36
CCDC39-201ENST00000442201 H0Y8G0 127 aa6.53□□□□□ -1.36
CCDC39-201ENST00000442201 H0YJW9 148 aa6.53□□□□□ -1.36
CCDC39-201ENST00000442201 SSSCA1O60232 199 aa6.53□□□□□ -1.36
CCDC39-201ENST00000442201 TYMSP04818 313 aa6.53□□□□□ -1.36
CCDC39-201ENST00000442201 ZNF705DP0CH99 300 aaPredicted RBP6.53□□□□□ -1.36
CCDC39-201ENST00000442201 ZNF705BP0CI00 300 aaPredicted RBP6.53□□□□□ -1.36
CCDC39-201ENST00000442201 PSG1P11464 419 aa6.53□□□□□ -1.36
CCDC39-201ENST00000442201 SLC25A16P16260 332 aa6.53□□□□□ -1.36
CCDC39-201ENST00000442201 RPL12P30050 165 aaKnown RBP6.53□□□□□ -1.36
CCDC39-201ENST00000442201 ZNF506Q5JVG8 444 aa6.53□□□□□ -1.36
CCDC39-201ENST00000442201 RPEQ96AT9 228 aa6.53□□□□□ -1.36
CCDC39-201ENST00000442201 MS4A10Q96PG2 267 aa6.53□□□□□ -1.36
CCDC39-201ENST00000442201 RARRES2Q99969 163 aa6.53□□□□□ -1.36
CCDC39-201ENST00000442201 HELZ2Q9BYK8 2649 aaKnown RBP6.53□□□□□ -1.36
CCDC39-201ENST00000442201 TRAV26-1A0A087WT03 109 aa6.53□□□□□ -1.36
CCDC39-201ENST00000442201 FAM90A9PA6NNJ1 464 aa6.53□□□□□ -1.36
CCDC39-201ENST00000442201 IGKV1-16P04430 117 aa6.53□□□□□ -1.36
CCDC39-201ENST00000442201 MMP9P14780 707 aa6.53□□□□□ -1.36
CCDC39-201ENST00000442201 HTR1DP28221 377 aa6.53□□□□□ -1.36
CCDC39-201ENST00000442201 P2RY1P47900 373 aa6.53□□□□□ -1.36
CCDC39-201ENST00000442201 VMO1Q7Z5L0 202 aa6.53□□□□□ -1.36
CCDC39-201ENST00000442201 NIT1Q86X76 327 aa6.53□□□□□ -1.36
CCDC39-201ENST00000442201 VKORC1L1Q8N0U8 176 aa6.53□□□□□ -1.36
CCDC39-201ENST00000442201 OSR1Q8TAX0 266 aaPredicted RBP6.53□□□□□ -1.36
CCDC39-201ENST00000442201 LHX4Q969G2 390 aa6.53□□□□□ -1.36
CCDC39-201ENST00000442201 SIRPDQ9H106 197 aa6.53□□□□□ -1.36
CCDC39-201ENST00000442201 KIAA1456Q9P272 454 aa6.53□□□□□ -1.36
CCDC39-201ENST00000442201 INSIG2Q9Y5U4 225 aa6.53□□□□□ -1.36
CCDC39-201ENST00000442201 DOCK11Q5JSL3 2073 aa6.53□□□□□ -1.36
CCDC39-201ENST00000442201 TENM4Q6N022 2769 aa6.53□□□□□ -1.36
CCDC39-201ENST00000442201 SYNGR2O43760 224 aa6.52□□□□□ -1.36
CCDC39-201ENST00000442201 CHST1O43916 411 aa6.52□□□□□ -1.36
CCDC39-201ENST00000442201 TOX4O94842 621 aa6.52□□□□□ -1.36
CCDC39-201ENST00000442201 CEACAM3P40198 252 aa6.52□□□□□ -1.36
CCDC39-201ENST00000442201 CAMLGP49069 296 aa6.52□□□□□ -1.36
CCDC39-201ENST00000442201 KLRD1Q13241 179 aa6.52□□□□□ -1.36
CCDC39-201ENST00000442201 POU2AF1Q16633 256 aa6.52□□□□□ -1.36
CCDC39-201ENST00000442201 DEFB113Q30KQ7 82 aa6.52□□□□□ -1.36
CCDC39-201ENST00000442201 SPSB3Q6PJ21 355 aa6.52□□□□□ -1.36
CCDC39-201ENST00000442201 PDPNQ86YL7 162 aa6.52□□□□□ -1.36
CCDC39-201ENST00000442201 FLYWCH2Q96CP2 140 aaKnown RBP6.52□□□□□ -1.36
CCDC39-201ENST00000442201 RAB40CQ96S21 281 aa6.52□□□□□ -1.36
CCDC39-201ENST00000442201 TMEM140Q9NV12 185 aa6.52□□□□□ -1.36
CCDC39-201ENST00000442201 BET1LQ9NYM9 111 aa6.52□□□□□ -1.36
CCDC39-201ENST00000442201 DPM3Q9P2X0 92 aa6.52□□□□□ -1.36
CCDC39-201ENST00000442201 FBXL17Q9UF56 701 aa6.52□□□□□ -1.36
CCDC39-201ENST00000442201 WASHC3Q9Y3C0 194 aa6.52□□□□□ -1.36
CCDC39-201ENST00000442201 CRYBG3Q68DQ2 2970 aa6.52□□□□□ -1.37
CCDC39-201ENST00000442201 IGLC2P0DOY2 106 aa6.52□□□□□ -1.37
CCDC39-201ENST00000442201 IGLC3P0DOY3 106 aa6.52□□□□□ -1.37
CCDC39-201ENST00000442201 USF1P22415 310 aaPredicted RBP6.52□□□□□ -1.37
CCDC39-201ENST00000442201 ICAM4Q14773 271 aa6.52□□□□□ -1.37
CCDC39-201ENST00000442201 GPR157Q5UAW9 335 aa6.52□□□□□ -1.37
CCDC39-201ENST00000442201 TOMM20LQ6UXN7 152 aa6.52□□□□□ -1.37
CCDC39-201ENST00000442201 OR2C3Q8N628 320 aa6.52□□□□□ -1.37
CCDC39-201ENST00000442201 OR4C13Q8NGP0 309 aa6.52□□□□□ -1.37
CCDC39-201ENST00000442201 OR4A16Q8NH70 328 aa6.52□□□□□ -1.37
CCDC39-201ENST00000442201 TBL2Q9Y4P3 447 aaKnown RBP6.52□□□□□ -1.37
CCDC39-201ENST00000442201 CENPEQ02224 2701 aa6.52□□□□□ -1.37
CCDC39-201ENST00000442201 GPR137BO60478 399 aa6.52□□□□□ -1.37
CCDC39-201ENST00000442201 TSPAN13O95857 204 aa6.52□□□□□ -1.37
CCDC39-201ENST00000442201 TMEM177Q53S58 311 aa6.52□□□□□ -1.37
CCDC39-201ENST00000442201 TCTEX1D4Q5JR98 221 aa6.52□□□□□ -1.37
CCDC39-201ENST00000442201 HCP5Q6MZN7 132 aa6.52□□□□□ -1.37
CCDC39-201ENST00000442201 Q6ZVH6 145 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms