RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 CHST1O43916 411 aa3.69□□□□□ -1.82
PTPN4-206ENST00000441089 SSSCA1O60232 199 aa3.69□□□□□ -1.82
PTPN4-206ENST00000441089 DEDDO75618 318 aa3.69□□□□□ -1.82
PTPN4-206ENST00000441089 ATG12O94817 140 aa3.69□□□□□ -1.82
PTPN4-206ENST00000441089 OR2F2O95006 317 aa3.69□□□□□ -1.82
PTPN4-206ENST00000441089 CA2P00918 260 aa3.69□□□□□ -1.82
PTPN4-206ENST00000441089 IAPPP10997 89 aa3.69□□□□□ -1.82
PTPN4-206ENST00000441089 TMEM11P17152 192 aa3.69□□□□□ -1.82
PTPN4-206ENST00000441089 CXCL2P19875 107 aa3.69□□□□□ -1.82
PTPN4-206ENST00000441089 PSMB6P28072 239 aa3.69□□□□□ -1.82
PTPN4-206ENST00000441089 BRS3P32247 399 aa3.69□□□□□ -1.82
PTPN4-206ENST00000441089 NKX2-1P43699 371 aaPredicted RBP3.69□□□□□ -1.82
PTPN4-206ENST00000441089 VDAC2P45880 294 aaPredicted RBP3.69□□□□□ -1.82
PTPN4-206ENST00000441089 S100A10P60903 97 aa3.69□□□□□ -1.82
PTPN4-206ENST00000441089 CYCSP99999 105 aaKnown RBP3.69□□□□□ -1.82
PTPN4-206ENST00000441089 NDPQ00604 133 aa3.69□□□□□ -1.82
PTPN4-206ENST00000441089 HES1Q14469 280 aa3.69□□□□□ -1.82
PTPN4-206ENST00000441089 MMDQ15546 238 aa3.69□□□□□ -1.82
PTPN4-206ENST00000441089 LY6EQ16553 131 aa3.69□□□□□ -1.82
PTPN4-206ENST00000441089 PRSS8Q16651 343 aa3.69□□□□□ -1.82
PTPN4-206ENST00000441089 C5orf64Q2M2E5 130 aa3.69□□□□□ -1.82
PTPN4-206ENST00000441089 LRRC75BQ2VPJ9 315 aa3.69□□□□□ -1.82
PTPN4-206ENST00000441089 VMA21Q3ZAQ7 101 aa3.69□□□□□ -1.82
PTPN4-206ENST00000441089 ZFP69Q49AA0 526 aa3.69□□□□□ -1.82
PTPN4-206ENST00000441089 THOC7Q6I9Y2 204 aaKnown RBP3.69□□□□□ -1.82
PTPN4-206ENST00000441089 PRSS54Q6PEW0 395 aa3.69□□□□□ -1.82
PTPN4-206ENST00000441089 ZNF429Q86V71 674 aa3.69□□□□□ -1.82
PTPN4-206ENST00000441089 TMEM219Q86XT9 240 aa3.69□□□□□ -1.82
PTPN4-206ENST00000441089 C9orf62Q8N4C0 152 aa3.69□□□□□ -1.82
PTPN4-206ENST00000441089 TEX45Q8NA69 505 aa3.69□□□□□ -1.82
PTPN4-206ENST00000441089 OR5AU1Q8NGC0 362 aa3.69□□□□□ -1.82
PTPN4-206ENST00000441089 OR2T10Q8NGZ9 312 aa3.69□□□□□ -1.82
PTPN4-206ENST00000441089 OR52E5Q8NH55 327 aa3.69□□□□□ -1.82
PTPN4-206ENST00000441089 OR4A5Q8NH83 315 aa3.69□□□□□ -1.82
PTPN4-206ENST00000441089 SCARB1Q8WTV0 552 aa3.69□□□□□ -1.82
PTPN4-206ENST00000441089 TMEM170AQ8WVE7 144 aa3.69□□□□□ -1.82
PTPN4-206ENST00000441089 CLCC1Q96S66 551 aa3.69□□□□□ -1.82
PTPN4-206ENST00000441089 SPIN2AQ99865 258 aa3.69□□□□□ -1.82
PTPN4-206ENST00000441089 SSX3Q99909 188 aa3.69□□□□□ -1.82
PTPN4-206ENST00000441089 SPIN2BQ9BPZ2 258 aa3.69□□□□□ -1.82
PTPN4-206ENST00000441089 HSPB9Q9BQS6 159 aa3.69□□□□□ -1.82
PTPN4-206ENST00000441089 PRSS22Q9GZN4 317 aa3.69□□□□□ -1.82
PTPN4-206ENST00000441089 RBKSQ9H477 322 aa3.69□□□□□ -1.82
PTPN4-206ENST00000441089 ZNF702PQ9H963 129 aa3.69□□□□□ -1.82
PTPN4-206ENST00000441089 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.69□□□□□ -1.82
PTPN4-206ENST00000441089 TMEM14BQ9NUH8 114 aa3.69□□□□□ -1.82
PTPN4-206ENST00000441089 METTL1Q9UBP6 276 aaKnown RBP3.69□□□□□ -1.82
PTPN4-206ENST00000441089 TCF19Q9Y242 345 aa3.69□□□□□ -1.82
PTPN4-206ENST00000441089 FXYD6-FXYD2A0A087WZ82 144 aa3.68□□□□□ -1.82
PTPN4-206ENST00000441089 IGHV7-81A0A0B4J1V7 117 aa3.68□□□□□ -1.82
PTPN4-206ENST00000441089 PIGBOS1A0A0B4J2F0 54 aa3.68□□□□□ -1.82
PTPN4-206ENST00000441089 IGSF23A1L1A6 192 aa3.68□□□□□ -1.82
PTPN4-206ENST00000441089 FAM24AA6NFZ4 105 aa3.68□□□□□ -1.82
PTPN4-206ENST00000441089 LINC01548A6NM66 108 aa3.68□□□□□ -1.82
PTPN4-206ENST00000441089 C15orf62A8K5M9 175 aa3.68□□□□□ -1.82
PTPN4-206ENST00000441089 PMS2P5A8MQ11 134 aa3.68□□□□□ -1.82
PTPN4-206ENST00000441089 TEX22C9J3V5 150 aa3.68□□□□□ -1.82
PTPN4-206ENST00000441089 FAM90A26D6RGX4 464 aa3.68□□□□□ -1.82
PTPN4-206ENST00000441089 H3BP45 60 aa3.68□□□□□ -1.82
PTPN4-206ENST00000441089 WRBO00258 174 aa3.68□□□□□ -1.82
PTPN4-206ENST00000441089 ARPC5O15511 151 aa3.68□□□□□ -1.82
PTPN4-206ENST00000441089 SYNGR2O43760 224 aa3.68□□□□□ -1.82
PTPN4-206ENST00000441089 SNAPC5O75971 98 aa3.68□□□□□ -1.82
PTPN4-206ENST00000441089 HNRNPCP07910 306 aaKnown RBP eCLIP3.68□□□□□ -1.82
PTPN4-206ENST00000441089 FAM106CPP0CH98 169 aa3.68□□□□□ -1.82
PTPN4-206ENST00000441089 EIF2B2P49770 351 aaKnown RBP3.68□□□□□ -1.82
PTPN4-206ENST00000441089 ARHGDIBP52566 201 aa3.68□□□□□ -1.82
PTPN4-206ENST00000441089 SPCS3P61009 180 aa3.68□□□□□ -1.82
PTPN4-206ENST00000441089 RPL8P62917 257 aaKnown RBP3.68□□□□□ -1.82
PTPN4-206ENST00000441089 PRCDQ00LT1 54 aa3.68□□□□□ -1.82
PTPN4-206ENST00000441089 TNFRSF9Q07011 255 aa3.68□□□□□ -1.82
PTPN4-206ENST00000441089 ARL16Q0P5N6 197 aa3.68□□□□□ -1.82
PTPN4-206ENST00000441089 TNXAQ16473 311 aa3.68□□□□□ -1.82
PTPN4-206ENST00000441089 LGALSLQ3ZCW2 172 aaPredicted RBP3.68□□□□□ -1.82
PTPN4-206ENST00000441089 ASPHD1Q5U4P2 390 aa3.68□□□□□ -1.82
PTPN4-206ENST00000441089 TMEM65Q6PI78 240 aa3.68□□□□□ -1.82
PTPN4-206ENST00000441089 C19orf35Q6ZS72 473 aa3.68□□□□□ -1.82
PTPN4-206ENST00000441089 HAPLN4Q86UW8 402 aa3.68□□□□□ -1.82
PTPN4-206ENST00000441089 PPP1R27Q86WC6 154 aa3.68□□□□□ -1.82
PTPN4-206ENST00000441089 C5orf56Q8N8D9 126 aa3.68□□□□□ -1.82
PTPN4-206ENST00000441089 OR10W1Q8NGF6 305 aa3.68□□□□□ -1.82
PTPN4-206ENST00000441089 OR4X2Q8NGF9 303 aa3.68□□□□□ -1.82
PTPN4-206ENST00000441089 OR4A16Q8NH70 328 aa3.68□□□□□ -1.82
PTPN4-206ENST00000441089 VSTM2AQ8TAG5 236 aa3.68□□□□□ -1.82
PTPN4-206ENST00000441089 DCUN1D4Q92564 292 aa3.68□□□□□ -1.82
PTPN4-206ENST00000441089 PPP1R14BQ96C90 147 aa3.68□□□□□ -1.82
PTPN4-206ENST00000441089 RBM14Q96PK6 669 aaKnown RBP3.68□□□□□ -1.82
PTPN4-206ENST00000441089 OR4C12Q96R67 309 aa3.68□□□□□ -1.82
PTPN4-206ENST00000441089 TSNAXQ99598 290 aaKnown RBP3.68□□□□□ -1.82
PTPN4-206ENST00000441089 TM2D3Q9BRN9 247 aa3.68□□□□□ -1.82
PTPN4-206ENST00000441089 SLC25A33Q9BSK2 321 aa3.68□□□□□ -1.82
PTPN4-206ENST00000441089 NDUFA4L2Q9NRX3 87 aa3.68□□□□□ -1.82
PTPN4-206ENST00000441089 PRNDQ9UKY0 176 aa3.68□□□□□ -1.82
PTPN4-206ENST00000441089 TNFSF18Q9UNG2 199 aa3.68□□□□□ -1.82
PTPN4-206ENST00000441089 ZNF256Q9Y2P7 627 aaPredicted RBP3.68□□□□□ -1.82
PTPN4-206ENST00000441089 ZNF257Q9Y2Q1 563 aa3.68□□□□□ -1.82
PTPN4-206ENST00000441089 FBXO7Q9Y3I1 522 aa3.68□□□□□ -1.82
PTPN4-206ENST00000441089 OR51B2Q9Y5P1 312 aa3.68□□□□□ -1.82
PTPN4-206ENST00000441089 IGLC7A0M8Q6 106 aa3.67□□□□□ -1.82
PTPN4-206ENST00000441089 NCBP2LA6PVI3 153 aaKnown RBP3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms