RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 OR2K2Q8NGT1 345 aa8.99□□□□□ -0.97
HSPG2-206ENST00000439717 MRAPQ8TCY5 172 aa8.99□□□□□ -0.97
HSPG2-206ENST00000439717 ZNF431Q8TF32 576 aaPredicted RBP8.99□□□□□ -0.97
HSPG2-206ENST00000439717 CHRDL1Q9BU40 450 aa8.99□□□□□ -0.97
HSPG2-206ENST00000439717 UFC1Q9Y3C8 167 aa8.99□□□□□ -0.97
HSPG2-206ENST00000439717 WI2-2373I1.2A0A1W2PRP0 233 aa8.98□□□□□ -0.97
HSPG2-206ENST00000439717 K7EIL1 84 aa8.98□□□□□ -0.97
HSPG2-206ENST00000439717 SCGB2A1O75556 95 aa8.98□□□□□ -0.97
HSPG2-206ENST00000439717 IFNA10P01566 189 aa8.98□□□□□ -0.97
HSPG2-206ENST00000439717 IL5P05113 134 aa8.98□□□□□ -0.97
HSPG2-206ENST00000439717 FOLR2P14207 255 aa8.98□□□□□ -0.97
HSPG2-206ENST00000439717 ADMP35318 185 aa8.98□□□□□ -0.97
HSPG2-206ENST00000439717 RPP30P78346 268 aaKnown RBP8.98□□□□□ -0.97
HSPG2-206ENST00000439717 ETFRF1Q6IPR1 90 aa8.98□□□□□ -0.97
HSPG2-206ENST00000439717 UNQ9165/PRO28630Q6UXU0 137 aa8.98□□□□□ -0.97
HSPG2-206ENST00000439717 OR4X1Q8NH49 305 aa8.98□□□□□ -0.97
HSPG2-206ENST00000439717 TMEM190Q8WZ59 177 aa8.98□□□□□ -0.97
HSPG2-206ENST00000439717 MARC2Q969Z3 335 aa8.98□□□□□ -0.97
HSPG2-206ENST00000439717 CIB3Q96Q77 187 aaPredicted RBP8.98□□□□□ -0.97
HSPG2-206ENST00000439717 FNDC4Q9H6D8 234 aaPredicted RBP8.98□□□□□ -0.97
HSPG2-206ENST00000439717 TECRQ9NZ01 308 aaKnown RBP8.98□□□□□ -0.97
HSPG2-206ENST00000439717 TMEM213A2RRL7 107 aa8.97□□□□□ -0.97
HSPG2-206ENST00000439717 MPTX1A8MV57 137 aa8.97□□□□□ -0.97
HSPG2-206ENST00000439717 SYNGR2O43760 224 aa8.97□□□□□ -0.97
HSPG2-206ENST00000439717 CLN5O75503 358 aa8.97□□□□□ -0.97
HSPG2-206ENST00000439717 TMEM50AO95807 157 aa8.97□□□□□ -0.97
HSPG2-206ENST00000439717 IGHV3-48P01763 117 aa8.97□□□□□ -0.97
HSPG2-206ENST00000439717 SLC25A4P12235 298 aa8.97□□□□□ -0.97
HSPG2-206ENST00000439717 SPNP16150 400 aa8.97□□□□□ -0.97
HSPG2-206ENST00000439717 CBLN1P23435 193 aa8.97□□□□□ -0.97
HSPG2-206ENST00000439717 ID3Q02535 119 aa8.97□□□□□ -0.97
HSPG2-206ENST00000439717 LCN12Q6JVE5 192 aa8.97□□□□□ -0.97
HSPG2-206ENST00000439717 ADAMTSL5Q6ZMM2 481 aa8.97□□□□□ -0.97
HSPG2-206ENST00000439717 OR4D5Q8NGN0 318 aa8.97□□□□□ -0.97
HSPG2-206ENST00000439717 DYNLRB2Q8TF09 96 aa8.97□□□□□ -0.97
HSPG2-206ENST00000439717 TMEM170AQ8WVE7 144 aa8.97□□□□□ -0.97
HSPG2-206ENST00000439717 SEC22CQ9BRL7 303 aa8.97□□□□□ -0.97
HSPG2-206ENST00000439717 TRAV30A0A087WSZ9 112 aa8.96□□□□□ -0.98
HSPG2-206ENST00000439717 IGHV3-35A0A0C4DH35 117 aa8.96□□□□□ -0.98
HSPG2-206ENST00000439717 C15orf62A8K5M9 175 aa8.96□□□□□ -0.98
HSPG2-206ENST00000439717 K7EMT4 169 aa8.96□□□□□ -0.98
HSPG2-206ENST00000439717 C8orf88P0DMB2 117 aa8.96□□□□□ -0.98
HSPG2-206ENST00000439717 GP9P14770 177 aa8.96□□□□□ -0.98
HSPG2-206ENST00000439717 NKX2-1P43699 371 aaPredicted RBP8.96□□□□□ -0.98
HSPG2-206ENST00000439717 RAB11AP62491 216 aa8.96□□□□□ -0.98
HSPG2-206ENST00000439717 IAH1Q2TAA2 248 aaPredicted RBP8.96□□□□□ -0.98
HSPG2-206ENST00000439717 DEFB114Q30KQ6 69 aa8.96□□□□□ -0.98
HSPG2-206ENST00000439717 C11orf87Q6NUJ2 197 aa8.96□□□□□ -0.98
HSPG2-206ENST00000439717 NRARPQ7Z6K4 114 aa8.96□□□□□ -0.98
HSPG2-206ENST00000439717 HAPLN4Q86UW8 402 aa8.96□□□□□ -0.98
HSPG2-206ENST00000439717 C12orf45Q8N5I9 185 aaPredicted RBP8.96□□□□□ -0.98
HSPG2-206ENST00000439717 PRR25Q96S07 402 aa8.96□□□□□ -0.98
HSPG2-206ENST00000439717 DAZ1Q9NQZ3 744 aaKnown RBP8.96□□□□□ -0.98
HSPG2-206ENST00000439717 MRPL27Q9P0M9 148 aaKnown RBP8.96□□□□□ -0.98
HSPG2-206ENST00000439717 WRBO00258 174 aa8.95□□□□□ -0.98
HSPG2-206ENST00000439717 PRAF2O60831 178 aa8.95□□□□□ -0.98
HSPG2-206ENST00000439717 IFNA4P05014 189 aa8.95□□□□□ -0.98
HSPG2-206ENST00000439717 IAPPP10997 89 aa8.95□□□□□ -0.98
HSPG2-206ENST00000439717 GPX4P36969 197 aaPredicted RBP8.95□□□□□ -0.98
HSPG2-206ENST00000439717 CD69Q07108 199 aa8.95□□□□□ -0.98
HSPG2-206ENST00000439717 MLANAQ16655 118 aa8.95□□□□□ -0.98
HSPG2-206ENST00000439717 TM4SF20Q53R12 229 aa8.95□□□□□ -0.98
HSPG2-206ENST00000439717 PRSS54Q6PEW0 395 aa8.95□□□□□ -0.98
HSPG2-206ENST00000439717 ZNF600Q6ZNG1 722 aa8.95□□□□□ -0.98
HSPG2-206ENST00000439717 ZBTB8BQ8NAP8 495 aaPredicted RBP8.95□□□□□ -0.98
HSPG2-206ENST00000439717 UXS1Q8NBZ7 420 aa8.95□□□□□ -0.98
HSPG2-206ENST00000439717 TMEM116Q8NCL8 245 aa8.95□□□□□ -0.98
HSPG2-206ENST00000439717 OR10C1Q96KK4 312 aa8.95□□□□□ -0.98
HSPG2-206ENST00000439717 MARVELD1Q9BSK0 173 aa8.95□□□□□ -0.98
HSPG2-206ENST00000439717 MAGT1Q9H0U3 335 aa8.95□□□□□ -0.98
HSPG2-206ENST00000439717 GPN1Q9HCN4 374 aaPredicted RBP8.95□□□□□ -0.98
HSPG2-206ENST00000439717 MRPL36Q9P0J6 103 aaKnown RBP8.95□□□□□ -0.98
HSPG2-206ENST00000439717 SNRPGP15A8MWD9 76 aa8.94□□□□□ -0.98
HSPG2-206ENST00000439717 INMT-MINDY4F8WBC2 141 aa8.94□□□□□ -0.98
HSPG2-206ENST00000439717 YIF1AO95070 293 aa8.94□□□□□ -0.98
HSPG2-206ENST00000439717 POLR2GP62487 172 aaKnown RBP eCLIP8.94□□□□□ -0.98
HSPG2-206ENST00000439717 CD300EQ496F6 205 aaPredicted RBP8.94□□□□□ -0.98
HSPG2-206ENST00000439717 DEFB121Q5J5C9 76 aa8.94□□□□□ -0.98
HSPG2-206ENST00000439717 SLC16A13Q7RTY0 426 aa8.94□□□□□ -0.98
HSPG2-206ENST00000439717 OR1S2Q8NGQ3 325 aa8.94□□□□□ -0.98
HSPG2-206ENST00000439717 CACNG8Q8WXS5 425 aa8.94□□□□□ -0.98
HSPG2-206ENST00000439717 ZNF414Q96IQ9 312 aa8.94□□□□□ -0.98
HSPG2-206ENST00000439717 C20orf24Q9BUV8 137 aa8.94□□□□□ -0.98
HSPG2-206ENST00000439717 LSM4Q9Y4Z0 139 aaKnown RBP8.94□□□□□ -0.98
HSPG2-206ENST00000439717 PRKDCP78527 4128 aaKnown RBP8.94□□□□□ -0.98
HSPG2-206ENST00000439717 EDN2P20800 178 aa8.93□□□□□ -0.98
HSPG2-206ENST00000439717 RND2P52198 227 aa8.93□□□□□ -0.98
HSPG2-206ENST00000439717 TOMM20LQ6UXN7 152 aa8.93□□□□□ -0.98
HSPG2-206ENST00000439717 GSG1LQ6UXU4 331 aa8.93□□□□□ -0.98
HSPG2-206ENST00000439717 NPIPB3Q92617 1050 aa8.93□□□□□ -0.98
HSPG2-206ENST00000439717 SMIM8Q96KF7 97 aa8.93□□□□□ -0.98
HSPG2-206ENST00000439717 RAB40CQ96S21 281 aa8.93□□□□□ -0.98
HSPG2-206ENST00000439717 GINS3Q9BRX5 216 aa8.93□□□□□ -0.98
HSPG2-206ENST00000439717 GSKIPQ9P0R6 139 aa8.93□□□□□ -0.98
HSPG2-206ENST00000439717 MLXQ9UH92 298 aa8.93□□□□□ -0.98
HSPG2-206ENST00000439717 STRAPQ9Y3F4 350 aaKnown RBP8.93□□□□□ -0.98
HSPG2-206ENST00000439717 TRAV14DV4A0A0A6YYC5 116 aa8.92□□□□□ -0.98
HSPG2-206ENST00000439717 TRAV25A0A0B4J276 109 aa8.92□□□□□ -0.98
HSPG2-206ENST00000439717 IZUMO1RA6ND01 250 aa8.92□□□□□ -0.98
HSPG2-206ENST00000439717 C5orf51A6NDU8 294 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms