RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 SLC24A4Q8NFF2 622 aa7.02□□□□□ -1.29
HPS4-206ENST00000439453 OR52E5Q8NH55 327 aa7.02□□□□□ -1.29
HPS4-206ENST00000439453 FAM215AQ9Y5M1 114 aa7.02□□□□□ -1.29
HPS4-206ENST00000439453 CSMD1Q96PZ7 3565 aa7.02□□□□□ -1.29
HPS4-206ENST00000439453 IGLV2-8P01709 118 aa7.01□□□□□ -1.29
HPS4-206ENST00000439453 GRPP07492 148 aa7.01□□□□□ -1.29
HPS4-206ENST00000439453 CA7P43166 264 aa7.01□□□□□ -1.29
HPS4-206ENST00000439453 RAB31Q13636 194 aa7.01□□□□□ -1.29
HPS4-206ENST00000439453 GFRALQ6UXV0 394 aa7.01□□□□□ -1.29
HPS4-206ENST00000439453 COQ2Q96H96 371 aa7.01□□□□□ -1.29
HPS4-206ENST00000439453 TMEM167BQ9NRX6 74 aa7.01□□□□□ -1.29
HPS4-206ENST00000439453 TECRQ9NZ01 308 aaKnown RBP7.01□□□□□ -1.29
HPS4-206ENST00000439453 SLC25A10Q9UBX3 287 aaPredicted RBP7.01□□□□□ -1.29
HPS4-206ENST00000439453 SSTR5P35346 364 aa7.01□□□□□ -1.29
HPS4-206ENST00000439453 RPS20P60866 119 aaKnown RBP7.01□□□□□ -1.29
HPS4-206ENST00000439453 ADORA2A-AS1P86434 159 aa7.01□□□□□ -1.29
HPS4-206ENST00000439453 LDLRAD2Q5SZI1 272 aa7.01□□□□□ -1.29
HPS4-206ENST00000439453 VKORC1L1Q8N0U8 176 aa7.01□□□□□ -1.29
HPS4-206ENST00000439453 RFESDQ8TAC1 157 aa7.01□□□□□ -1.29
HPS4-206ENST00000439453 FAM57AQ8TBR7 257 aa7.01□□□□□ -1.29
HPS4-206ENST00000439453 NEUROG1Q92886 237 aa7.01□□□□□ -1.29
HPS4-206ENST00000439453 CST9LQ9H4G1 147 aa7.01□□□□□ -1.29
HPS4-206ENST00000439453 ENY2Q9NPA8 101 aa7.01□□□□□ -1.29
HPS4-206ENST00000439453 CLCF1Q9UBD9 225 aa7.01□□□□□ -1.29
HPS4-206ENST00000439453 TRAV3A0A0B4J244 114 aa7.01□□□□□ -1.29
HPS4-206ENST00000439453 PLGLB1Q02325 96 aa7.01□□□□□ -1.29
HPS4-206ENST00000439453 OCIAD2Q56VL3 154 aa7.01□□□□□ -1.29
HPS4-206ENST00000439453 Q8TCH9 128 aa7.01□□□□□ -1.29
HPS4-206ENST00000439453 DOPEY1Q5JWR5 2465 aa7□□□□□ -1.29
HPS4-206ENST00000439453 C2orf70A6NJV1 201 aa7□□□□□ -1.29
HPS4-206ENST00000439453 CA1P00915 261 aaPredicted RBP7□□□□□ -1.29
HPS4-206ENST00000439453 DUTP33316 252 aaKnown RBP7□□□□□ -1.29
HPS4-206ENST00000439453 PRR27Q6MZM9 219 aa7□□□□□ -1.29
HPS4-206ENST00000439453 GP6Q9HCN6 339 aa7□□□□□ -1.29
HPS4-206ENST00000439453 K7ERU9 68 aa7□□□□□ -1.29
HPS4-206ENST00000439453 WNT9BO14905 357 aa7□□□□□ -1.29
HPS4-206ENST00000439453 TAX1BP3O14907 124 aa7□□□□□ -1.29
HPS4-206ENST00000439453 TFF1P04155 84 aa7□□□□□ -1.29
HPS4-206ENST00000439453 PSG1P11464 419 aa7□□□□□ -1.29
HPS4-206ENST00000439453 IGFBP2P18065 325 aa7□□□□□ -1.29
HPS4-206ENST00000439453 GPR12P47775 334 aa7□□□□□ -1.29
HPS4-206ENST00000439453 PRR20EP86478 221 aa7□□□□□ -1.29
HPS4-206ENST00000439453 PRR20CP86479 221 aa7□□□□□ -1.29
HPS4-206ENST00000439453 PRR20DP86480 221 aa7□□□□□ -1.29
HPS4-206ENST00000439453 PRR20BP86481 221 aa7□□□□□ -1.29
HPS4-206ENST00000439453 PRR20AP86496 221 aa7□□□□□ -1.29
HPS4-206ENST00000439453 MPV17L2Q567V2 206 aa7□□□□□ -1.29
HPS4-206ENST00000439453 RNASEKQ6P5S7 137 aaKnown RBP7□□□□□ -1.29
HPS4-206ENST00000439453 Q6ZR03 302 aa7□□□□□ -1.29
HPS4-206ENST00000439453 FAM214BQ7L5A3 538 aa7□□□□□ -1.29
HPS4-206ENST00000439453 SPATA12Q7Z6I5 190 aa7□□□□□ -1.29
HPS4-206ENST00000439453 WIPF2Q8TF74 440 aaPredicted RBP7□□□□□ -1.29
HPS4-206ENST00000439453 ST6GALNAC6Q969X2 333 aa7□□□□□ -1.29
HPS4-206ENST00000439453 FAM234AQ9H0X4 552 aa7□□□□□ -1.29
HPS4-206ENST00000439453 TNFRSF19Q9NS68 423 aa7□□□□□ -1.29
HPS4-206ENST00000439453 TCF19Q9Y242 345 aa7□□□□□ -1.29
HPS4-206ENST00000439453 TRGV5A0A0B4J1U4 118 aa7□□□□□ -1.29
HPS4-206ENST00000439453 AHRRA9YTQ3 701 aa7□□□□□ -1.29
HPS4-206ENST00000439453 PPOXP50336 477 aa7□□□□□ -1.29
HPS4-206ENST00000439453 ERVK-16P61578 105 aa7□□□□□ -1.29
HPS4-206ENST00000439453 KLF5Q13887 457 aaPredicted RBP7□□□□□ -1.29
HPS4-206ENST00000439453 TPRX1Q8N7U7 411 aa7□□□□□ -1.29
HPS4-206ENST00000439453 OR13A1Q8NGR1 328 aa7□□□□□ -1.29
HPS4-206ENST00000439453 PRR7Q8TB68 274 aa7□□□□□ -1.29
HPS4-206ENST00000439453 FAM168AQ92567 244 aa7□□□□□ -1.29
HPS4-206ENST00000439453 IGF2BP2-AS1Q96M15 143 aa7□□□□□ -1.29
HPS4-206ENST00000439453 TP73-AS1Q9UF72 201 aa7□□□□□ -1.29
HPS4-206ENST00000439453 GGTLC3B5MD39 225 aa6.99□□□□□ -1.29
HPS4-206ENST00000439453 PROP1O75360 226 aa6.99□□□□□ -1.29
HPS4-206ENST00000439453 HOXA4Q00056 320 aaPredicted RBP6.99□□□□□ -1.29
HPS4-206ENST00000439453 ALKBH6Q3KRA9 238 aa6.99□□□□□ -1.29
HPS4-206ENST00000439453 RASL11AQ6T310 242 aa6.99□□□□□ -1.29
HPS4-206ENST00000439453 MDP1Q86V88 176 aa6.99□□□□□ -1.29
HPS4-206ENST00000439453 KIR3DL3Q8N743 410 aa6.99□□□□□ -1.29
HPS4-206ENST00000439453 SSBP3Q9BWW4 388 aaPredicted RBP6.99□□□□□ -1.29
HPS4-206ENST00000439453 SAP30LQ9HAJ7 183 aa6.99□□□□□ -1.29
HPS4-206ENST00000439453 USP9YO00507 2555 aaPredicted RBP6.99□□□□□ -1.29
HPS4-206ENST00000439453 LTC4SQ16873 150 aa6.99□□□□□ -1.29
HPS4-206ENST00000439453 GDF5OSQ5U4N7 250 aa6.99□□□□□ -1.29
HPS4-206ENST00000439453 OR4A47Q6IF82 309 aa6.99□□□□□ -1.29
HPS4-206ENST00000439453 NUDT10Q8NFP7 164 aa6.99□□□□□ -1.29
HPS4-206ENST00000439453 ZNF503Q96F45 646 aa6.99□□□□□ -1.29
HPS4-206ENST00000439453 COMMD5Q9GZQ3 224 aa6.99□□□□□ -1.29
HPS4-206ENST00000439453 RPH3ALQ9UNE2 315 aa6.99□□□□□ -1.29
HPS4-206ENST00000439453 WASHC3Q9Y3C0 194 aa6.99□□□□□ -1.29
HPS4-206ENST00000439453 LRRK2Q5S007 2527 aa6.99□□□□□ -1.29
HPS4-206ENST00000439453 INTS1Q8N201 2190 aaKnown RBP6.99□□□□□ -1.29
HPS4-206ENST00000439453 NPY1RP25929 384 aa6.99□□□□□ -1.29
HPS4-206ENST00000439453 MFAP2P55001 183 aa6.99□□□□□ -1.29
HPS4-206ENST00000439453 BPIFB3P59826 476 aa6.99□□□□□ -1.29
HPS4-206ENST00000439453 RPL8P62917 257 aaKnown RBP6.99□□□□□ -1.29
HPS4-206ENST00000439453 ZNF826PQ6ZT77 177 aa6.99□□□□□ -1.29
HPS4-206ENST00000439453 NHLRC2Q8NBF2 726 aa6.99□□□□□ -1.29
HPS4-206ENST00000439453 FAM216AQ8WUB2 273 aa6.99□□□□□ -1.29
HPS4-206ENST00000439453 NABP2Q9BQ15 211 aa6.99□□□□□ -1.29
HPS4-206ENST00000439453 TMEM140Q9NV12 185 aa6.99□□□□□ -1.29
HPS4-206ENST00000439453 CLEC5AQ9NY25 188 aa6.99□□□□□ -1.29
HPS4-206ENST00000439453 PTPN13Q12923 2485 aa6.98□□□□□ -1.29
HPS4-206ENST00000439453 TRGV8A0A0C4DH27 118 aa6.98□□□□□ -1.29
HPS4-206ENST00000439453 M0R1X1 148 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms