RNA–Protein interactions for RNA: ENST00000438518.5

HDAC6-208, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-208ENST00000438518 HBG2P69892 147 aa14.24□□□□□ -0.13
HDAC6-208ENST00000438518 SPSB3Q6PJ21 355 aa14.24□□□□□ -0.13
HDAC6-208ENST00000438518 SLC16A13Q7RTY0 426 aa14.24□□□□□ -0.13
HDAC6-208ENST00000438518 OR4F17Q8NGA8 305 aa14.24□□□□□ -0.13
HDAC6-208ENST00000438518 OR4X1Q8NH49 305 aa14.24□□□□□ -0.13
HDAC6-208ENST00000438518 SPATA3Q8NHX4 192 aa14.24□□□□□ -0.13
HDAC6-208ENST00000438518 DCUN1D4Q92564 292 aa14.24□□□□□ -0.13
HDAC6-208ENST00000438518 OR4F4Q96R69 305 aa14.24□□□□□ -0.13
HDAC6-208ENST00000438518 PEF1Q9UBV8 284 aaKnown RBP14.24□□□□□ -0.13
HDAC6-208ENST00000438518 hCG_2014768A0A024R1R8 64 aa14.23□□□□□ -0.13
HDAC6-208ENST00000438518 TRAV30A0A087WSZ9 112 aa14.23□□□□□ -0.13
HDAC6-208ENST00000438518 CCNKO75909 580 aa14.23□□□□□ -0.13
HDAC6-208ENST00000438518 IGHV3-11P01762 117 aa14.23□□□□□ -0.13
HDAC6-208ENST00000438518 HSPB1P04792 205 aaKnown RBP14.23□□□□□ -0.13
HDAC6-208ENST00000438518 METTL15P1P0C7V9 234 aa14.23□□□□□ -0.13
HDAC6-208ENST00000438518 TMEM116Q8NCL8 245 aa14.23□□□□□ -0.13
HDAC6-208ENST00000438518 BSCL2Q96G97 398 aaPredicted RBP14.23□□□□□ -0.13
HDAC6-208ENST00000438518 SLC35E1Q96K37 410 aa14.23□□□□□ -0.13
HDAC6-208ENST00000438518 CCDC140Q96MF4 163 aa14.23□□□□□ -0.13
HDAC6-208ENST00000438518 FNDC4Q9H6D8 234 aaPredicted RBP14.23□□□□□ -0.13
HDAC6-208ENST00000438518 FAM24AA6NFZ4 105 aa14.22□□□□□ -0.13
HDAC6-208ENST00000438518 M0QZ24 198 aa14.22□□□□□ -0.13
HDAC6-208ENST00000438518 S100A11P31949 105 aa14.22□□□□□ -0.13
HDAC6-208ENST00000438518 NUP62P37198 522 aaPredicted RBP14.22□□□□□ -0.13
HDAC6-208ENST00000438518 DLK1P80370 383 aa14.22□□□□□ -0.13
HDAC6-208ENST00000438518 DEFA5Q01523 94 aa14.22□□□□□ -0.13
HDAC6-208ENST00000438518 NSUN5P1Q3KNT7 163 aa14.22□□□□□ -0.13
HDAC6-208ENST00000438518 ACSM6Q6P461 480 aa14.22□□□□□ -0.13
HDAC6-208ENST00000438518 AKAP14Q86UN6 197 aa14.22□□□□□ -0.13
HDAC6-208ENST00000438518 TCTE3Q8IZS6 198 aa14.22□□□□□ -0.13
HDAC6-208ENST00000438518 GNG7O60262 68 aa14.21□□□□□ -0.13
HDAC6-208ENST00000438518 CLN5O75503 358 aa14.21□□□□□ -0.13
HDAC6-208ENST00000438518 ZP3P21754 424 aa14.21□□□□□ -0.13
HDAC6-208ENST00000438518 MYCNOSP40205 109 aa14.21□□□□□ -0.13
HDAC6-208ENST00000438518 EWSR1Q01844 656 aaKnown RBP eCLIP14.21□□□□□ -0.13
HDAC6-208ENST00000438518 ATP6V1FQ16864 119 aa14.21□□□□□ -0.13
HDAC6-208ENST00000438518 Q56UQ5 140 aa14.21□□□□□ -0.13
HDAC6-208ENST00000438518 OR8G2PQ6IF36 304 aa14.21□□□□□ -0.13
HDAC6-208ENST00000438518 C8orf86Q6ZUL3 223 aa14.21□□□□□ -0.13
HDAC6-208ENST00000438518 A0A1B0GVG6 124 aa14.2□□□□□ -0.14
HDAC6-208ENST00000438518 A0A1W2PRX2 142 aa14.2□□□□□ -0.14
HDAC6-208ENST00000438518 IGSF23A1L1A6 192 aa14.2□□□□□ -0.14
HDAC6-208ENST00000438518 LINC01619G3V211 115 aa14.2□□□□□ -0.14
HDAC6-208ENST00000438518 NUPL2O15504 423 aaKnown RBP14.2□□□□□ -0.14
HDAC6-208ENST00000438518 TGOLN2O43493 480 aa14.2□□□□□ -0.14
HDAC6-208ENST00000438518 GGCTO75223 188 aaKnown RBP14.2□□□□□ -0.14
HDAC6-208ENST00000438518 RPL12P30050 165 aaKnown RBP14.2□□□□□ -0.14
HDAC6-208ENST00000438518 ZNF616Q08AN1 781 aa14.2□□□□□ -0.14
HDAC6-208ENST00000438518 FHL3Q13643 280 aa14.2□□□□□ -0.14
HDAC6-208ENST00000438518 CLEC19AQ6UXS0 136 aa14.2□□□□□ -0.14
HDAC6-208ENST00000438518 ACOT7LQ6ZUV0 252 aa14.2□□□□□ -0.14
HDAC6-208ENST00000438518 OR11H1Q8NG94 326 aa14.2□□□□□ -0.14
HDAC6-208ENST00000438518 DPF1Q92782 380 aa14.2□□□□□ -0.14
HDAC6-208ENST00000438518 ST6GAL2Q96JF0 529 aa14.2□□□□□ -0.14
HDAC6-208ENST00000438518 AQP10Q96PS8 301 aa14.2□□□□□ -0.14
HDAC6-208ENST00000438518 OR5B12Q96R08 314 aa14.2□□□□□ -0.14
HDAC6-208ENST00000438518 IGHV3-21A0A0B4J1V1 117 aa14.19□□□□□ -0.14
HDAC6-208ENST00000438518 F8W735 103 aaPredicted RBP14.19□□□□□ -0.14
HDAC6-208ENST00000438518 G3V3Q6 166 aa14.19□□□□□ -0.14
HDAC6-208ENST00000438518 CCL24O00175 119 aa14.19□□□□□ -0.14
HDAC6-208ENST00000438518 CLEC3BP05452 202 aa14.19□□□□□ -0.14
HDAC6-208ENST00000438518 GPR183P32249 361 aa14.19□□□□□ -0.14
HDAC6-208ENST00000438518 ARL3P36405 182 aa14.19□□□□□ -0.14
HDAC6-208ENST00000438518 RND2P52198 227 aa14.19□□□□□ -0.14
HDAC6-208ENST00000438518 SLC38A11Q08AI6 406 aa14.19□□□□□ -0.14
HDAC6-208ENST00000438518 GAMTQ14353 236 aa14.19□□□□□ -0.14
HDAC6-208ENST00000438518 C18orf65Q6ZTR6 163 aa14.19□□□□□ -0.14
HDAC6-208ENST00000438518 UBAC2Q8NBM4 344 aa14.19□□□□□ -0.14
HDAC6-208ENST00000438518 INO80EQ8NBZ0 244 aaPredicted RBP14.19□□□□□ -0.14
HDAC6-208ENST00000438518 OR1N2Q8NGR9 330 aa14.19□□□□□ -0.14
HDAC6-208ENST00000438518 NPVFQ9HCQ7 196 aa14.19□□□□□ -0.14
HDAC6-208ENST00000438518 CST7O76096 145 aa14.18□□□□□ -0.14
HDAC6-208ENST00000438518 IGHV3-23P01764 117 aa14.18□□□□□ -0.14
HDAC6-208ENST00000438518 RELQ04864 619 aaPredicted RBP14.18□□□□□ -0.14
HDAC6-208ENST00000438518 ZNF546Q86UE3 836 aa14.18□□□□□ -0.14
HDAC6-208ENST00000438518 LILRB2Q8N423 598 aa14.18□□□□□ -0.14
HDAC6-208ENST00000438518 OR1S2Q8NGQ3 325 aa14.18□□□□□ -0.14
HDAC6-208ENST00000438518 HSPB11Q9Y547 144 aa14.18□□□□□ -0.14
HDAC6-208ENST00000438518 S4R3C0 116 aa14.18□□□□□ -0.14
HDAC6-208ENST00000438518 IGHV4OR15-8A0A075B7B6 117 aa14.17□□□□□ -0.14
HDAC6-208ENST00000438518 A0A087WW49 117 aa14.17□□□□□ -0.14
HDAC6-208ENST00000438518 FXYD6-FXYD2A0A087WZ82 144 aa14.17□□□□□ -0.14
HDAC6-208ENST00000438518 ANKRD34BA5PLL1 514 aa14.17□□□□□ -0.14
HDAC6-208ENST00000438518 OR2T8A6NH00 312 aa14.17□□□□□ -0.14
HDAC6-208ENST00000438518 HMSDA8MTL9 139 aa14.17□□□□□ -0.14
HDAC6-208ENST00000438518 PF4P02776 101 aa14.17□□□□□ -0.14
HDAC6-208ENST00000438518 FABP1P07148 127 aa14.17□□□□□ -0.14
HDAC6-208ENST00000438518 AKR1C1Q04828 323 aa14.17□□□□□ -0.14
HDAC6-208ENST00000438518 MLANAQ16655 118 aa14.17□□□□□ -0.14
HDAC6-208ENST00000438518 RPEL1Q2QD12 228 aa14.17□□□□□ -0.14
HDAC6-208ENST00000438518 VWC2Q2TAL6 325 aa14.17□□□□□ -0.14
HDAC6-208ENST00000438518 Q5BKY6 102 aa14.17□□□□□ -0.14
HDAC6-208ENST00000438518 TMEM144Q7Z5S9 345 aa14.17□□□□□ -0.14
HDAC6-208ENST00000438518 HAPLN4Q86UW8 402 aa14.17□□□□□ -0.14
HDAC6-208ENST00000438518 TMEM217Q8N7C4 229 aa14.17□□□□□ -0.14
HDAC6-208ENST00000438518 NPIPB3Q92617 1050 aa14.17□□□□□ -0.14
HDAC6-208ENST00000438518 ACY3Q96HD9 319 aa14.17□□□□□ -0.14
HDAC6-208ENST00000438518 RAX2Q96IS3 184 aa14.17□□□□□ -0.14
HDAC6-208ENST00000438518 ZC4H2Q9NQZ6 224 aa14.17□□□□□ -0.14
HDAC6-208ENST00000438518 TNFSF18Q9UNG2 199 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms