RNA–Protein interactions for RNA: ENST00000438224.5

HERPUD2-206, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 811 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-206ENST00000438224 SURF2Q15527 256 aaPredicted RBP6.42□□□□□ -1.38
HERPUD2-206ENST00000438224 LCN12Q6JVE5 192 aa6.42□□□□□ -1.38
HERPUD2-206ENST00000438224 HSD17B13Q7Z5P4 300 aaPredicted RBP6.42□□□□□ -1.38
HERPUD2-206ENST00000438224 TMEM61Q8N0U2 210 aa6.42□□□□□ -1.38
HERPUD2-206ENST00000438224 Q8N402 240 aa6.42□□□□□ -1.38
HERPUD2-206ENST00000438224 CCDC71LQ8N9Z2 235 aa6.42□□□□□ -1.38
HERPUD2-206ENST00000438224 ZNF114Q8NC26 417 aa6.42□□□□□ -1.38
HERPUD2-206ENST00000438224 OR1P1Q8NH06 330 aa6.42□□□□□ -1.38
HERPUD2-206ENST00000438224 OR4A16Q8NH70 328 aa6.42□□□□□ -1.38
HERPUD2-206ENST00000438224 GLMPQ8WWB7 406 aa6.42□□□□□ -1.38
HERPUD2-206ENST00000438224 TMEM190Q8WZ59 177 aa6.42□□□□□ -1.38
HERPUD2-206ENST00000438224 TMEM56Q96MV1 263 aa6.42□□□□□ -1.38
HERPUD2-206ENST00000438224 NEU1Q99519 415 aa6.42□□□□□ -1.38
HERPUD2-206ENST00000438224 ZNF436Q9C0F3 470 aaPredicted RBP6.42□□□□□ -1.38
HERPUD2-206ENST00000438224 NAA60Q9H7X0 242 aa6.42□□□□□ -1.38
HERPUD2-206ENST00000438224 FKBP11Q9NYL4 201 aa6.42□□□□□ -1.38
HERPUD2-206ENST00000438224 RABL2AQ9UBK7 228 aaPredicted RBP6.42□□□□□ -1.38
HERPUD2-206ENST00000438224 FBXL17Q9UF56 701 aa6.42□□□□□ -1.38
HERPUD2-206ENST00000438224 RSL24D1Q9UHA3 163 aaKnown RBP6.42□□□□□ -1.38
HERPUD2-206ENST00000438224 RABL2BQ9UNT1 228 aa6.42□□□□□ -1.38
HERPUD2-206ENST00000438224 ZNF320A2RRD8 509 aa6.41□□□□□ -1.38
HERPUD2-206ENST00000438224 CDS2O95674 445 aa6.41□□□□□ -1.38
HERPUD2-206ENST00000438224 CTSGP08311 255 aa6.41□□□□□ -1.38
HERPUD2-206ENST00000438224 NHLRC4P0CG21 123 aaPredicted RBP6.41□□□□□ -1.38
HERPUD2-206ENST00000438224 C8orf88P0DMB2 117 aa6.41□□□□□ -1.38
HERPUD2-206ENST00000438224 ETV6P41212 452 aa6.41□□□□□ -1.38
HERPUD2-206ENST00000438224 SUPT4H1P63272 117 aaKnown RBP6.41□□□□□ -1.38
HERPUD2-206ENST00000438224 TMEM187Q14656 261 aa6.41□□□□□ -1.38
HERPUD2-206ENST00000438224 TRIM16LQ309B1 348 aa6.41□□□□□ -1.38
HERPUD2-206ENST00000438224 AARDQ4LEZ3 155 aa6.41□□□□□ -1.38
HERPUD2-206ENST00000438224 PVRIGQ6DKI7 326 aa6.41□□□□□ -1.38
HERPUD2-206ENST00000438224 TMEM88Q6PEY1 159 aa6.41□□□□□ -1.38
HERPUD2-206ENST00000438224 PLET1Q6UQ28 207 aa6.41□□□□□ -1.38
HERPUD2-206ENST00000438224 BTNL8Q6UX41 500 aa6.41□□□□□ -1.38
HERPUD2-206ENST00000438224 SELENOHQ8IZQ5 122 aaKnown RBP6.41□□□□□ -1.38
HERPUD2-206ENST00000438224 UXS1Q8NBZ7 420 aa6.41□□□□□ -1.38
HERPUD2-206ENST00000438224 OR2K2Q8NGT1 345 aa6.41□□□□□ -1.38
HERPUD2-206ENST00000438224 DYNLRB2Q8TF09 96 aa6.41□□□□□ -1.38
HERPUD2-206ENST00000438224 PRRT1Q99946 306 aa6.41□□□□□ -1.38
HERPUD2-206ENST00000438224 FNDC4Q9H6D8 234 aaPredicted RBP6.41□□□□□ -1.38
HERPUD2-206ENST00000438224 C21orf62Q9NYP8 219 aa6.41□□□□□ -1.38
HERPUD2-206ENST00000438224 MRPL36Q9P0J6 103 aaKnown RBP6.41□□□□□ -1.38
HERPUD2-206ENST00000438224 C14orf166Q9Y224 244 aaKnown RBP6.41□□□□□ -1.38
HERPUD2-206ENST00000438224 HUWE1Q7Z6Z7 4374 aaKnown RBP6.41□□□□□ -1.38
HERPUD2-206ENST00000438224 TENM2Q9NT68 2774 aa6.4□□□□□ -1.38
HERPUD2-206ENST00000438224 TEX13DA0A0J9YY54 714 aaPredicted RBP6.4□□□□□ -1.38
HERPUD2-206ENST00000438224 ZNF701M0R085 212 aaPredicted RBP6.4□□□□□ -1.38
HERPUD2-206ENST00000438224 ZNF207O43670 478 aaKnown RBP6.4□□□□□ -1.38
HERPUD2-206ENST00000438224 B3GALNT1O75752 331 aa6.4□□□□□ -1.38
HERPUD2-206ENST00000438224 MT-CO2P00403 227 aa6.4□□□□□ -1.38
HERPUD2-206ENST00000438224 RNASE2P10153 161 aaKnown RBP6.4□□□□□ -1.38
HERPUD2-206ENST00000438224 FAM106AQ4KMX7 169 aa6.4□□□□□ -1.38
HERPUD2-206ENST00000438224 PYDC2Q56P42 97 aa6.4□□□□□ -1.38
HERPUD2-206ENST00000438224 TMEM268Q5VZI3 342 aa6.4□□□□□ -1.38
HERPUD2-206ENST00000438224 UBAC2Q8NBM4 344 aa6.4□□□□□ -1.38
HERPUD2-206ENST00000438224 RBPMSQ93062 196 aaKnown RBP6.4□□□□□ -1.38
HERPUD2-206ENST00000438224 GPR146Q96CH1 333 aa6.4□□□□□ -1.38
HERPUD2-206ENST00000438224 BSCL2Q96G97 398 aaPredicted RBP6.4□□□□□ -1.38
HERPUD2-206ENST00000438224 WWC2-AS2Q96NR7 200 aa6.4□□□□□ -1.38
HERPUD2-206ENST00000438224 SDHCQ99643 169 aaPredicted RBP6.4□□□□□ -1.38
HERPUD2-206ENST00000438224 TM2D3Q9BRN9 247 aa6.4□□□□□ -1.38
HERPUD2-206ENST00000438224 PLEKHA3Q9HB20 300 aa6.4□□□□□ -1.38
HERPUD2-206ENST00000438224 MCUBQ9NWR8 336 aa6.4□□□□□ -1.38
HERPUD2-206ENST00000438224 THYN1Q9P016 225 aa6.4□□□□□ -1.38
HERPUD2-206ENST00000438224 CACNG5Q9UF02 275 aa6.4□□□□□ -1.38
HERPUD2-206ENST00000438224 TRAV34A0A0B4J273 112 aa6.39□□□□□ -1.39
HERPUD2-206ENST00000438224 INS-IGF2F8WCM5 200 aa6.39□□□□□ -1.39
HERPUD2-206ENST00000438224 NDUFA4O00483 81 aa6.39□□□□□ -1.39
HERPUD2-206ENST00000438224 SCAF4O95104 1147 aaKnown RBP6.39□□□□□ -1.39
HERPUD2-206ENST00000438224 NXPH3O95157 252 aa6.39□□□□□ -1.39
HERPUD2-206ENST00000438224 IFNA17P01571 189 aa6.39□□□□□ -1.39
HERPUD2-206ENST00000438224 FCGR2BP31994 310 aaPredicted RBP6.39□□□□□ -1.39
HERPUD2-206ENST00000438224 CD81P60033 236 aa6.39□□□□□ -1.39
HERPUD2-206ENST00000438224 NHLH2Q02577 135 aa6.39□□□□□ -1.39
HERPUD2-206ENST00000438224 MLANAQ16655 118 aa6.39□□□□□ -1.39
HERPUD2-206ENST00000438224 GUCA2BQ16661 112 aa6.39□□□□□ -1.39
HERPUD2-206ENST00000438224 HAGHQ16775 308 aa6.39□□□□□ -1.39
HERPUD2-206ENST00000438224 BSXQ3C1V8 233 aa6.39□□□□□ -1.39
HERPUD2-206ENST00000438224 Q56UQ5 140 aa6.39□□□□□ -1.39
HERPUD2-206ENST00000438224 SPSB3Q6PJ21 355 aa6.39□□□□□ -1.39
HERPUD2-206ENST00000438224 LINC00322Q6ZN03 302 aaPredicted RBP6.39□□□□□ -1.39
HERPUD2-206ENST00000438224 SGPP2Q8IWX5 399 aa6.39□□□□□ -1.39
HERPUD2-206ENST00000438224 DEFB125Q8N687 156 aa6.39□□□□□ -1.39
HERPUD2-206ENST00000438224 SLC35G3Q8N808 338 aa6.39□□□□□ -1.39
HERPUD2-206ENST00000438224 OR1L6Q8NGR2 347 aa6.39□□□□□ -1.39
HERPUD2-206ENST00000438224 TMEM170AQ8WVE7 144 aa6.39□□□□□ -1.39
HERPUD2-206ENST00000438224 PINX1Q96BK5 328 aaKnown RBP6.39□□□□□ -1.39
HERPUD2-206ENST00000438224 GALNT14Q96FL9 552 aa6.39□□□□□ -1.39
HERPUD2-206ENST00000438224 RCHY1Q96PM5 261 aa6.39□□□□□ -1.39
HERPUD2-206ENST00000438224 ATP6V0BQ99437 205 aa6.39□□□□□ -1.39
HERPUD2-206ENST00000438224 NEURL2Q9BR09 285 aa6.39□□□□□ -1.39
HERPUD2-206ENST00000438224 SRRQ9GZT4 340 aa6.39□□□□□ -1.39
HERPUD2-206ENST00000438224 TECRQ9NZ01 308 aaKnown RBP6.39□□□□□ -1.39
HERPUD2-206ENST00000438224 TMEM56-RWDD3S4R434 201 aa6.39□□□□□ -1.39
HERPUD2-206ENST00000438224 RBMY1BA6NDE4 496 aaKnown RBP6.38□□□□□ -1.39
HERPUD2-206ENST00000438224 RBMY1EA6NEQ0 496 aaKnown RBP6.38□□□□□ -1.39
HERPUD2-206ENST00000438224 CYB5BO43169 146 aa6.38□□□□□ -1.39
HERPUD2-206ENST00000438224 RBMY1DP0C7P1 496 aaKnown RBP6.38□□□□□ -1.39
HERPUD2-206ENST00000438224 AKR1C4P17516 323 aa6.38□□□□□ -1.39
HERPUD2-206ENST00000438224 HOXA1P49639 335 aaPredicted RBP6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms