RNA–Protein interactions for RNA: ENST00000433762.1

COL6A3-207, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL6A3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-207ENST00000433762 CCL8P80075 99 aa11.05□□□□□ -0.64
COL6A3-207ENST00000433762 C10orf113Q5VZT2 155 aa11.05□□□□□ -0.64
COL6A3-207ENST00000433762 C22orf34Q6ZV56 151 aa11.05□□□□□ -0.64
COL6A3-207ENST00000433762 RND1Q92730 232 aa11.05□□□□□ -0.64
COL6A3-207ENST00000433762 MBD6Q96DN6 1003 aa11.05□□□□□ -0.64
COL6A3-207ENST00000433762 DPRXA6NFQ7 191 aa11.04□□□□□ -0.64
COL6A3-207ENST00000433762 M0R143 59 aa11.04□□□□□ -0.64
COL6A3-207ENST00000433762 CHRNB4P30926 498 aa11.04□□□□□ -0.64
COL6A3-207ENST00000433762 DOLPP1Q86YN1 238 aa11.04□□□□□ -0.64
COL6A3-207ENST00000433762 TEX45Q8NA69 505 aa11.04□□□□□ -0.64
COL6A3-207ENST00000433762 FAM122AQ96E09 287 aa11.04□□□□□ -0.64
COL6A3-207ENST00000433762 TBX15Q96SF7 602 aa11.04□□□□□ -0.64
COL6A3-207ENST00000433762 PAXXQ9BUH6 204 aa11.04□□□□□ -0.64
COL6A3-207ENST00000433762 NAT8BQ9UHF3 227 aa11.04□□□□□ -0.64
COL6A3-207ENST00000433762 A0A1B0GUS0 222 aa11.04□□□□□ -0.64
COL6A3-207ENST00000433762 CGB1A6NKQ9 187 aa11.04□□□□□ -0.64
COL6A3-207ENST00000433762 FSTL3O95633 263 aa11.04□□□□□ -0.64
COL6A3-207ENST00000433762 RAB4AP20338 218 aa11.04□□□□□ -0.64
COL6A3-207ENST00000433762 MYCNOSP40205 109 aa11.04□□□□□ -0.64
COL6A3-207ENST00000433762 WT1-ASQ06250 92 aa11.04□□□□□ -0.64
COL6A3-207ENST00000433762 TMEM183BQ1AE95 376 aa11.04□□□□□ -0.64
COL6A3-207ENST00000433762 TMEM155Q4W5P6 130 aa11.04□□□□□ -0.64
COL6A3-207ENST00000433762 ZCCHC24Q8N2G6 241 aaKnown RBP11.04□□□□□ -0.64
COL6A3-207ENST00000433762 DCAF16Q9NXF7 216 aa11.04□□□□□ -0.64
COL6A3-207ENST00000433762 ZNF586Q9NXT0 402 aa11.04□□□□□ -0.64
COL6A3-207ENST00000433762 MRPL27Q9P0M9 148 aaKnown RBP11.04□□□□□ -0.64
COL6A3-207ENST00000433762 AMMECR1Q9Y4X0 333 aaPredicted RBP11.04□□□□□ -0.64
COL6A3-207ENST00000433762 IGKV1D-37A0A075B6S9 117 aa11.03□□□□□ -0.64
COL6A3-207ENST00000433762 A0A0G2JNJ9 132 aa11.03□□□□□ -0.64
COL6A3-207ENST00000433762 GPX1P07203 203 aa11.03□□□□□ -0.64
COL6A3-207ENST00000433762 GATA2P23769 480 aaPredicted RBP11.03□□□□□ -0.64
COL6A3-207ENST00000433762 COMPP49747 757 aaPredicted RBP11.03□□□□□ -0.64
COL6A3-207ENST00000433762 TDGF1P3P51864 188 aa11.03□□□□□ -0.64
COL6A3-207ENST00000433762 NUTF2P61970 127 aaKnown RBP11.03□□□□□ -0.64
COL6A3-207ENST00000433762 SNRNP40Q96DI7 357 aaKnown RBP11.03□□□□□ -0.64
COL6A3-207ENST00000433762 GRAMD2BQ96HH9 432 aa11.03□□□□□ -0.64
COL6A3-207ENST00000433762 KCNS1Q96KK3 526 aa11.03□□□□□ -0.64
COL6A3-207ENST00000433762 TRGV9Q99603 122 aa11.03□□□□□ -0.64
COL6A3-207ENST00000433762 NGBQ9NPG2 151 aa11.03□□□□□ -0.64
COL6A3-207ENST00000433762 ZNF355PQ9NSJ1 428 aa11.03□□□□□ -0.64
COL6A3-207ENST00000433762 Q9UFV3 132 aa11.03□□□□□ -0.64
COL6A3-207ENST00000433762 SVILO95425 2214 aa11.03□□□□□ -0.64
COL6A3-207ENST00000433762 ZNF705FA8MVS1 300 aaPredicted RBP11.03□□□□□ -0.64
COL6A3-207ENST00000433762 CORTO00230 105 aa11.03□□□□□ -0.64
COL6A3-207ENST00000433762 PEX7O00628 323 aa11.03□□□□□ -0.64
COL6A3-207ENST00000433762 ZNF705DP0CH99 300 aaPredicted RBP11.03□□□□□ -0.64
COL6A3-207ENST00000433762 ZNF705BP0CI00 300 aaPredicted RBP11.03□□□□□ -0.64
COL6A3-207ENST00000433762 CCL3L1P16619 93 aa11.03□□□□□ -0.64
COL6A3-207ENST00000433762 FOXC1Q12948 553 aa11.03□□□□□ -0.64
COL6A3-207ENST00000433762 USF2Q15853 346 aaPredicted RBP11.03□□□□□ -0.64
COL6A3-207ENST00000433762 ZNF329Q86UD4 541 aa11.03□□□□□ -0.64
COL6A3-207ENST00000433762 SIGLECL1Q8N7X8 197 aa11.03□□□□□ -0.64
COL6A3-207ENST00000433762 HSPB9Q9BQS6 159 aa11.03□□□□□ -0.64
COL6A3-207ENST00000433762 SAMD10Q9BYL1 202 aa11.03□□□□□ -0.64
COL6A3-207ENST00000433762 RNASE7Q9H1E1 156 aaKnown RBP11.03□□□□□ -0.64
COL6A3-207ENST00000433762 FNDC4Q9H6D8 234 aaPredicted RBP11.03□□□□□ -0.64
COL6A3-207ENST00000433762 GNB4Q9HAV0 340 aa11.03□□□□□ -0.64
COL6A3-207ENST00000433762 FRYQ5TBA9 3013 aa11.02□□□□□ -0.65
COL6A3-207ENST00000433762 PLP1P60201 277 aa11.02□□□□□ -0.65
COL6A3-207ENST00000433762 BSPH1Q075Z2 132 aa11.02□□□□□ -0.65
COL6A3-207ENST00000433762 ATP5L2Q7Z4Y8 100 aa11.02□□□□□ -0.65
COL6A3-207ENST00000433762 TGIF2LXQ8IUE1 241 aa11.02□□□□□ -0.65
COL6A3-207ENST00000433762 OR4B1Q8NGF8 309 aa11.02□□□□□ -0.65
COL6A3-207ENST00000433762 OR2T6Q8NHC8 308 aa11.02□□□□□ -0.65
COL6A3-207ENST00000433762 C22orf15Q8WYQ4 148 aa11.02□□□□□ -0.65
COL6A3-207ENST00000433762 PERPQ96FX8 193 aa11.02□□□□□ -0.65
COL6A3-207ENST00000433762 RBM14Q96PK6 669 aaKnown RBP11.02□□□□□ -0.65
COL6A3-207ENST00000433762 ZNRD1Q9P1U0 126 aa11.02□□□□□ -0.65
COL6A3-207ENST00000433762 SSUH2Q9Y2M2 353 aa11.02□□□□□ -0.65
COL6A3-207ENST00000433762 FCN3O75636 299 aa11.02□□□□□ -0.65
COL6A3-207ENST00000433762 THBDP07204 575 aa11.02□□□□□ -0.65
COL6A3-207ENST00000433762 LOXP28300 417 aaPredicted RBP11.02□□□□□ -0.65
COL6A3-207ENST00000433762 MLANAQ16655 118 aa11.02□□□□□ -0.65
COL6A3-207ENST00000433762 TOMM20LQ6UXN7 152 aa11.02□□□□□ -0.65
COL6A3-207ENST00000433762 WFDC8Q8IUA0 241 aa11.02□□□□□ -0.65
COL6A3-207ENST00000433762 FXYD5Q96DB9 178 aa11.02□□□□□ -0.65
COL6A3-207ENST00000433762 WFIKKN1Q96NZ8 548 aa11.02□□□□□ -0.65
COL6A3-207ENST00000433762 MIEN1Q9BRT3 115 aa11.02□□□□□ -0.65
COL6A3-207ENST00000433762 ZNF835Q9Y2P0 537 aa11.02□□□□□ -0.65
COL6A3-207ENST00000433762 KLF12Q9Y4X4 402 aa11.02□□□□□ -0.65
COL6A3-207ENST00000433762 SNRPCP09234 159 aaKnown RBP11.01□□□□□ -0.65
COL6A3-207ENST00000433762 CA7P43166 264 aa11.01□□□□□ -0.65
COL6A3-207ENST00000433762 PATE2Q6UY27 113 aa11.01□□□□□ -0.65
COL6A3-207ENST00000433762 C19orf35Q6ZS72 473 aa11.01□□□□□ -0.65
COL6A3-207ENST00000433762 NPIPB3Q92617 1050 aa11.01□□□□□ -0.65
COL6A3-207ENST00000433762 ZNF331Q9NQX6 463 aaPredicted RBP11.01□□□□□ -0.65
COL6A3-207ENST00000433762 E7EUB6 86 aa11.01□□□□□ -0.65
COL6A3-207ENST00000433762 RBP4P02753 201 aa11.01□□□□□ -0.65
COL6A3-207ENST00000433762 CT83Q5H943 113 aa11.01□□□□□ -0.65
COL6A3-207ENST00000433762 TMEM116Q8NCL8 245 aa11.01□□□□□ -0.65
COL6A3-207ENST00000433762 RNASE6Q93091 150 aaKnown RBP11.01□□□□□ -0.65
COL6A3-207ENST00000433762 SNHG12Q9BXW3 62 aa11.01□□□□□ -0.65
COL6A3-207ENST00000433762 A0A1W2PPI3 338 aa11□□□□□ -0.65
COL6A3-207ENST00000433762 BMPR1BO00238 502 aa11□□□□□ -0.65
COL6A3-207ENST00000433762 EREGO14944 169 aa11□□□□□ -0.65
COL6A3-207ENST00000433762 IGHV1-8P0DP01 117 aa11□□□□□ -0.65
COL6A3-207ENST00000433762 HIST1H1EP10412 219 aaKnown RBP11□□□□□ -0.65
COL6A3-207ENST00000433762 MGST1P10620 155 aaKnown RBP11□□□□□ -0.65
COL6A3-207ENST00000433762 TBR1Q16650 682 aa11□□□□□ -0.65
COL6A3-207ENST00000433762 VAMP8Q9BV40 100 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms