RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 GREB1LQ9C091 1923 aaPredicted RBP4.39□□□□□ -1.71
PTPN4-203ENST00000430976 PGLYRP1O75594 196 aaPredicted RBP4.39□□□□□ -1.71
PTPN4-203ENST00000430976 IGHV3-7P01780 117 aa4.39□□□□□ -1.71
PTPN4-203ENST00000430976 ZNF823P16415 610 aa4.39□□□□□ -1.71
PTPN4-203ENST00000430976 RBMY1FQ15415 496 aaKnown RBP4.39□□□□□ -1.71
PTPN4-203ENST00000430976 CIARTQ8N365 385 aaPredicted RBP4.39□□□□□ -1.71
PTPN4-203ENST00000430976 IL1F10Q8WWZ1 152 aa4.39□□□□□ -1.71
PTPN4-203ENST00000430976 GPX7Q96SL4 187 aaPredicted RBP4.39□□□□□ -1.71
PTPN4-203ENST00000430976 LINC00312Q9Y6C7 94 aa4.39□□□□□ -1.71
PTPN4-203ENST00000430976 NCKAP5O14513 1909 aa4.39□□□□□ -1.71
PTPN4-203ENST00000430976 PLCH1Q4KWH8 1693 aa4.39□□□□□ -1.71
PTPN4-203ENST00000430976 TRAV41A0A0B4J266 112 aa4.39□□□□□ -1.71
PTPN4-203ENST00000430976 ZAR1LA6NP61 321 aa4.39□□□□□ -1.71
PTPN4-203ENST00000430976 GYPAP02724 150 aa4.39□□□□□ -1.71
PTPN4-203ENST00000430976 COX6A1P12074 109 aa4.39□□□□□ -1.71
PTPN4-203ENST00000430976 IGFBP3P17936 291 aaPredicted RBP4.39□□□□□ -1.71
PTPN4-203ENST00000430976 LMO1P25800 156 aa4.39□□□□□ -1.71
PTPN4-203ENST00000430976 LOXP28300 417 aaPredicted RBP4.39□□□□□ -1.71
PTPN4-203ENST00000430976 SLC25A1P53007 311 aa4.39□□□□□ -1.71
PTPN4-203ENST00000430976 CCL20P78556 96 aa4.39□□□□□ -1.71
PTPN4-203ENST00000430976 CDK5R1Q15078 307 aa4.39□□□□□ -1.71
PTPN4-203ENST00000430976 PAPPA-AS1Q5QFB9 102 aa4.39□□□□□ -1.71
PTPN4-203ENST00000430976 CLECL1Q8IZS7 167 aa4.39□□□□□ -1.71
PTPN4-203ENST00000430976 GCSAMQ8N6F7 178 aa4.39□□□□□ -1.71
PTPN4-203ENST00000430976 OR9G1Q8NH87 305 aa4.39□□□□□ -1.71
PTPN4-203ENST00000430976 SP7Q8TDD2 431 aaPredicted RBP4.39□□□□□ -1.71
PTPN4-203ENST00000430976 AJUBAQ96IF1 538 aa4.39□□□□□ -1.71
PTPN4-203ENST00000430976 LINC00527Q9UJ94 153 aa4.39□□□□□ -1.71
PTPN4-203ENST00000430976 PHF3Q92576 2039 aaKnown RBP4.39□□□□□ -1.71
PTPN4-203ENST00000430976 SDK1Q7Z5N4 2213 aa4.39□□□□□ -1.71
PTPN4-203ENST00000430976 C5orf49A4QMS7 147 aa4.39□□□□□ -1.71
PTPN4-203ENST00000430976 SMKR1H3BMG3 65 aa4.39□□□□□ -1.71
PTPN4-203ENST00000430976 GLI4P10075 376 aa4.39□□□□□ -1.71
PTPN4-203ENST00000430976 HOXB6P17509 224 aaKnown RBP4.39□□□□□ -1.71
PTPN4-203ENST00000430976 ARL16Q0P5N6 197 aa4.39□□□□□ -1.71
PTPN4-203ENST00000430976 LCNL1Q6ZST4 164 aa4.39□□□□□ -1.71
PTPN4-203ENST00000430976 DPH3Q96FX2 82 aa4.39□□□□□ -1.71
PTPN4-203ENST00000430976 IGF2BP2-AS1Q96M15 143 aa4.39□□□□□ -1.71
PTPN4-203ENST00000430976 PKD1L2Q7Z442 2459 aa4.38□□□□□ -1.71
PTPN4-203ENST00000430976 NUP188Q5SRE5 1749 aa4.38□□□□□ -1.71
PTPN4-203ENST00000430976 TRGV11A0A075B6L2 103 aa4.38□□□□□ -1.71
PTPN4-203ENST00000430976 IGHMP01871 453 aa4.38□□□□□ -1.71
PTPN4-203ENST00000430976 SRP19P09132 144 aaKnown RBP4.38□□□□□ -1.71
PTPN4-203ENST00000430976 GFERP55789 205 aa4.38□□□□□ -1.71
PTPN4-203ENST00000430976 SLC25A30Q5SVS4 291 aa4.38□□□□□ -1.71
PTPN4-203ENST00000430976 OR5C1Q8NGR4 320 aa4.38□□□□□ -1.71
PTPN4-203ENST00000430976 OTOSQ8NHW6 89 aa4.38□□□□□ -1.71
PTPN4-203ENST00000430976 C2orf50Q96LR7 162 aa4.38□□□□□ -1.71
PTPN4-203ENST00000430976 PI4KAP42356 2102 aa4.38□□□□□ -1.71
PTPN4-203ENST00000430976 GLI3P10071 1580 aa4.38□□□□□ -1.71
PTPN4-203ENST00000430976 C5orf63A6NC05 138 aa4.38□□□□□ -1.71
PTPN4-203ENST00000430976 GATA1P15976 413 aaPredicted RBP4.38□□□□□ -1.71
PTPN4-203ENST00000430976 SRD5A1P18405 259 aa4.38□□□□□ -1.71
PTPN4-203ENST00000430976 TMEM258P61165 79 aa4.38□□□□□ -1.71
PTPN4-203ENST00000430976 SPEM2Q0P670 501 aa4.38□□□□□ -1.71
PTPN4-203ENST00000430976 ANKRD37Q7Z713 158 aa4.38□□□□□ -1.71
PTPN4-203ENST00000430976 ZNF584Q8IVC4 421 aa4.38□□□□□ -1.71
PTPN4-203ENST00000430976 TMEM230Q96A57 120 aa4.38□□□□□ -1.71
PTPN4-203ENST00000430976 J3QT63 122 aa4.38□□□□□ -1.71
PTPN4-203ENST00000430976 OVOL3O00110 214 aa4.38□□□□□ -1.71
PTPN4-203ENST00000430976 IL4P05112 153 aa4.38□□□□□ -1.71
PTPN4-203ENST00000430976 CELA2AP08217 269 aa4.38□□□□□ -1.71
PTPN4-203ENST00000430976 OR5AL1P0C617 328 aa4.38□□□□□ -1.71
PTPN4-203ENST00000430976 SMIM10L2AP0DMW4 78 aa4.38□□□□□ -1.71
PTPN4-203ENST00000430976 SMIM10L2BP0DMW5 78 aa4.38□□□□□ -1.71
PTPN4-203ENST00000430976 PRR30Q53SZ7 412 aaPredicted RBP4.38□□□□□ -1.71
PTPN4-203ENST00000430976 ZNF324BQ6AW86 544 aaPredicted RBP4.38□□□□□ -1.71
PTPN4-203ENST00000430976 TMEM14EPQ6UXP3 125 aa4.38□□□□□ -1.71
PTPN4-203ENST00000430976 SPTSSBQ8NFR3 76 aa4.38□□□□□ -1.71
PTPN4-203ENST00000430976 TMEM255BQ8WV15 326 aa4.38□□□□□ -1.71
PTPN4-203ENST00000430976 SMDT1Q9H4I9 107 aa4.38□□□□□ -1.71
PTPN4-203ENST00000430976 ZNF581Q9P0T4 197 aa4.38□□□□□ -1.71
PTPN4-203ENST00000430976 TUBGCP6Q96RT7 1819 aa4.38□□□□□ -1.71
PTPN4-203ENST00000430976 CADP27708 2225 aa4.37□□□□□ -1.71
PTPN4-203ENST00000430976 HCFC1P51610 2035 aa4.37□□□□□ -1.71
PTPN4-203ENST00000430976 DOCK6Q96HP0 2047 aa4.37□□□□□ -1.71
PTPN4-203ENST00000430976 SCN3AQ9NY46 2000 aa4.37□□□□□ -1.71
PTPN4-203ENST00000430976 PPP1R3DO95685 299 aa4.37□□□□□ -1.71
PTPN4-203ENST00000430976 PIRTP0C851 137 aa4.37□□□□□ -1.71
PTPN4-203ENST00000430976 LINC00869P0C866 280 aa4.37□□□□□ -1.71
PTPN4-203ENST00000430976 RNASE2P10153 161 aaKnown RBP4.37□□□□□ -1.71
PTPN4-203ENST00000430976 GP9P14770 177 aa4.37□□□□□ -1.71
PTPN4-203ENST00000430976 CTRLP40313 264 aa4.37□□□□□ -1.71
PTPN4-203ENST00000430976 TMEM207Q6UWW9 146 aa4.37□□□□□ -1.71
PTPN4-203ENST00000430976 RPS19BP1Q86WX3 136 aaKnown RBP4.37□□□□□ -1.71
PTPN4-203ENST00000430976 MSRB3Q8IXL7 192 aa4.37□□□□□ -1.71
PTPN4-203ENST00000430976 OR8A1Q8NGG7 326 aa4.37□□□□□ -1.71
PTPN4-203ENST00000430976 COPS9Q8WXC6 57 aa4.37□□□□□ -1.71
PTPN4-203ENST00000430976 PLEKHB2Q96CS7 222 aa4.37□□□□□ -1.71
PTPN4-203ENST00000430976 CYTL1Q9NRR1 136 aa4.37□□□□□ -1.71
PTPN4-203ENST00000430976 NWD2Q9ULI1 1742 aa4.37□□□□□ -1.71
PTPN4-203ENST00000430976 NACAE9PAV3 2078 aa4.37□□□□□ -1.71
PTPN4-203ENST00000430976 RGPD3A6NKT7 1758 aaPredicted RBP4.37□□□□□ -1.71
PTPN4-203ENST00000430976 RGPD4Q7Z3J3 1758 aa4.37□□□□□ -1.71
PTPN4-203ENST00000430976 TECPR2O15040 1411 aa4.37□□□□□ -1.71
PTPN4-203ENST00000430976 QRICH2Q9H0J4 1663 aa4.37□□□□□ -1.71
PTPN4-203ENST00000430976 VWC2LB2RUY7 222 aa4.37□□□□□ -1.71
PTPN4-203ENST00000430976 ZGLP1P0C6A0 271 aa4.37□□□□□ -1.71
PTPN4-203ENST00000430976 CRYGSP22914 178 aa4.37□□□□□ -1.71
PTPN4-203ENST00000430976 IL3RAP26951 378 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms