RNA–Protein interactions for RNA: ENST00000430038.5

CPSF4-203, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 735 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-203ENST00000430038 CSTL1Q9H114 145 aa12.52□□□□□ -0.41
CPSF4-203ENST00000430038 COPZ2Q9P299 210 aa12.52□□□□□ -0.41
CPSF4-203ENST00000430038 DNAH10Q8IVF4 4471 aa12.52□□□□□ -0.41
CPSF4-203ENST00000430038 VPS13DQ5THJ4 4388 aa12.52□□□□□ -0.41
CPSF4-203ENST00000430038 GABARAPH6UMI1 98 aa12.51□□□□□ -0.41
CPSF4-203ENST00000430038 IGKV1-17P01599 117 aa12.51□□□□□ -0.41
CPSF4-203ENST00000430038 NPBWR1P48145 328 aa12.51□□□□□ -0.41
CPSF4-203ENST00000430038 TAS2R19P59542 299 aa12.51□□□□□ -0.41
CPSF4-203ENST00000430038 AARDQ4LEZ3 155 aa12.51□□□□□ -0.41
CPSF4-203ENST00000430038 LEMD1Q68G75 181 aa12.51□□□□□ -0.41
CPSF4-203ENST00000430038 ZNF600Q6ZNG1 722 aa12.51□□□□□ -0.41
CPSF4-203ENST00000430038 ZFAND1Q8TCF1 268 aa12.51□□□□□ -0.41
CPSF4-203ENST00000430038 GPR146Q96CH1 333 aa12.51□□□□□ -0.41
CPSF4-203ENST00000430038 TMEM222Q9H0R3 208 aa12.51□□□□□ -0.41
CPSF4-203ENST00000430038 PRR13Q9NZ81 148 aa12.51□□□□□ -0.41
CPSF4-203ENST00000430038 TEX13DA0A0J9YY54 714 aaPredicted RBP12.5□□□□□ -0.41
CPSF4-203ENST00000430038 CLN5O75503 358 aa12.5□□□□□ -0.41
CPSF4-203ENST00000430038 LY6G6CO95867 125 aa12.5□□□□□ -0.41
CPSF4-203ENST00000430038 GIG44P09565 113 aaPredicted RBP12.5□□□□□ -0.41
CPSF4-203ENST00000430038 HOXA1P49639 335 aaPredicted RBP12.5□□□□□ -0.41
CPSF4-203ENST00000430038 DEFB131AP59861 70 aa12.5□□□□□ -0.41
CPSF4-203ENST00000430038 MEF2DQ14814 521 aa12.5□□□□□ -0.41
CPSF4-203ENST00000430038 TIGITQ495A1 244 aa12.5□□□□□ -0.41
CPSF4-203ENST00000430038 GPR132Q9UNW8 380 aa12.5□□□□□ -0.41
CPSF4-203ENST00000430038 DEFB4AO15263 64 aa12.49□□□□□ -0.41
CPSF4-203ENST00000430038 RBMS2Q15434 407 aaKnown RBP12.49□□□□□ -0.41
CPSF4-203ENST00000430038 OR4C16Q8NGL9 310 aa12.49□□□□□ -0.41
CPSF4-203ENST00000430038 OR4X1Q8NH49 305 aa12.49□□□□□ -0.41
CPSF4-203ENST00000430038 SMIM4Q8WVI0 70 aa12.49□□□□□ -0.41
CPSF4-203ENST00000430038 MPTX1A8MV57 137 aa12.48□□□□□ -0.41
CPSF4-203ENST00000430038 RGS5O15539 181 aa12.48□□□□□ -0.41
CPSF4-203ENST00000430038 NXPH3O95157 252 aa12.48□□□□□ -0.41
CPSF4-203ENST00000430038 ATF4P18848 351 aaPredicted RBP12.48□□□□□ -0.41
CPSF4-203ENST00000430038 CRYBB3P26998 211 aa12.48□□□□□ -0.41
CPSF4-203ENST00000430038 RPL5P46777 297 aaKnown RBP12.48□□□□□ -0.41
CPSF4-203ENST00000430038 CCDC71LQ8N9Z2 235 aa12.48□□□□□ -0.41
CPSF4-203ENST00000430038 DYNC2LI1Q8TCX1 351 aa12.48□□□□□ -0.41
CPSF4-203ENST00000430038 TMEM230Q96A57 120 aa12.48□□□□□ -0.41
CPSF4-203ENST00000430038 RRNAD1Q96FB5 475 aaKnown RBP12.48□□□□□ -0.41
CPSF4-203ENST00000430038 RARRES2Q99969 163 aa12.48□□□□□ -0.41
CPSF4-203ENST00000430038 GINS3Q9BRX5 216 aa12.48□□□□□ -0.41
CPSF4-203ENST00000430038 MRPS26Q9BYN8 205 aaKnown RBP12.48□□□□□ -0.41
CPSF4-203ENST00000430038 NAA60Q9H7X0 242 aa12.48□□□□□ -0.41
CPSF4-203ENST00000430038 NUPR2A6NF83 97 aa12.47□□□□□ -0.41
CPSF4-203ENST00000430038 CRYM-AS1A6NIL9 109 aa12.47□□□□□ -0.41
CPSF4-203ENST00000430038 K7EQG2 157 aa12.47□□□□□ -0.41
CPSF4-203ENST00000430038 OPRK1P41145 380 aa12.47□□□□□ -0.41
CPSF4-203ENST00000430038 NANOS2P60321 138 aaKnown RBP12.47□□□□□ -0.41
CPSF4-203ENST00000430038 SPCS3P61009 180 aa12.47□□□□□ -0.41
CPSF4-203ENST00000430038 GPR141Q7Z602 305 aa12.47□□□□□ -0.41
CPSF4-203ENST00000430038 RPP25LQ8N5L8 163 aaKnown RBP12.47□□□□□ -0.41
CPSF4-203ENST00000430038 OR11H2Q8NH07 326 aa12.47□□□□□ -0.41
CPSF4-203ENST00000430038 PHLDA1Q8WV24 401 aaPredicted RBP12.47□□□□□ -0.41
CPSF4-203ENST00000430038 CACNG5Q9UF02 275 aa12.47□□□□□ -0.41
CPSF4-203ENST00000430038 U3KQE9 123 aa12.47□□□□□ -0.41
CPSF4-203ENST00000430038 ATG12O94817 140 aa12.46□□□□□ -0.41
CPSF4-203ENST00000430038 IGLC1P0CG04 106 aa12.46□□□□□ -0.41
CPSF4-203ENST00000430038 NPPCP23582 126 aa12.46□□□□□ -0.41
CPSF4-203ENST00000430038 SUB1P53999 127 aaKnown RBP eCLIP12.46□□□□□ -0.41
CPSF4-203ENST00000430038 CMC4P56277 68 aaPredicted RBP12.46□□□□□ -0.41
CPSF4-203ENST00000430038 RPL11P62913 178 aaKnown RBP12.46□□□□□ -0.41
CPSF4-203ENST00000430038 SSBP1Q04837 148 aaKnown RBP12.46□□□□□ -0.41
CPSF4-203ENST00000430038 PRSS54Q6PEW0 395 aa12.46□□□□□ -0.41
CPSF4-203ENST00000430038 CLVS1Q8IUQ0 354 aaPredicted RBP12.46□□□□□ -0.41
CPSF4-203ENST00000430038 OR51S1Q8NGJ8 323 aa12.46□□□□□ -0.41
CPSF4-203ENST00000430038 OR52E5Q8NH55 327 aa12.46□□□□□ -0.41
CPSF4-203ENST00000430038 DCANP1Q8TF63 244 aa12.46□□□□□ -0.41
CPSF4-203ENST00000430038 RBPMSQ93062 196 aaKnown RBP12.46□□□□□ -0.41
CPSF4-203ENST00000430038 PDCD10Q9BUL8 212 aa12.46□□□□□ -0.41
CPSF4-203ENST00000430038 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.46□□□□□ -0.41
CPSF4-203ENST00000430038 DNAH6Q9C0G6 4158 aa12.46□□□□□ -0.42
CPSF4-203ENST00000430038 DNASE2O00115 360 aaPredicted RBP12.45□□□□□ -0.42
CPSF4-203ENST00000430038 CORTO00230 105 aa12.45□□□□□ -0.42
CPSF4-203ENST00000430038 CTDSPLO15194 276 aa12.45□□□□□ -0.42
CPSF4-203ENST00000430038 CA1P00915 261 aaPredicted RBP12.45□□□□□ -0.42
CPSF4-203ENST00000430038 PAFAH1B2P68402 229 aa12.45□□□□□ -0.42
CPSF4-203ENST00000430038 TMEM187Q14656 261 aa12.45□□□□□ -0.42
CPSF4-203ENST00000430038 C2orf83Q53S99 150 aa12.45□□□□□ -0.42
CPSF4-203ENST00000430038 TMEM268Q5VZI3 342 aa12.45□□□□□ -0.42
CPSF4-203ENST00000430038 RNASE11Q8TAA1 199 aaKnown RBP12.45□□□□□ -0.42
CPSF4-203ENST00000430038 C15orf40Q8WUR7 153 aa12.45□□□□□ -0.42
CPSF4-203ENST00000430038 GATAD1Q8WUU5 269 aa12.45□□□□□ -0.42
CPSF4-203ENST00000430038 DIRAS2Q96HU8 199 aa12.45□□□□□ -0.42
CPSF4-203ENST00000430038 SOSTQ9BQB4 213 aa12.45□□□□□ -0.42
CPSF4-203ENST00000430038 C6orf62Q9GZU0 229 aaPredicted RBP12.45□□□□□ -0.42
CPSF4-203ENST00000430038 RABAC1Q9UI14 185 aa12.45□□□□□ -0.42
CPSF4-203ENST00000430038 C14orf166Q9Y224 244 aaKnown RBP12.45□□□□□ -0.42
CPSF4-203ENST00000430038 TMEM56-RWDD3S4R434 201 aa12.45□□□□□ -0.42
CPSF4-203ENST00000430038 TRAV2A0A0B4J234 112 aa12.44□□□□□ -0.42
CPSF4-203ENST00000430038 ANKRD20A5PA0PJZ0 165 aa12.44□□□□□ -0.42
CPSF4-203ENST00000430038 KNCNA6PVL3 124 aa12.44□□□□□ -0.42
CPSF4-203ENST00000430038 DEDDO75618 318 aa12.44□□□□□ -0.42
CPSF4-203ENST00000430038 B3GALNT1O75752 331 aa12.44□□□□□ -0.42
CPSF4-203ENST00000430038 AKAIN1P0CW23 69 aa12.44□□□□□ -0.42
CPSF4-203ENST00000430038 P2RY1P47900 373 aa12.44□□□□□ -0.42
CPSF4-203ENST00000430038 RND2P52198 227 aa12.44□□□□□ -0.42
CPSF4-203ENST00000430038 SUPT4H1P63272 117 aaKnown RBP12.44□□□□□ -0.42
CPSF4-203ENST00000430038 IL18Q14116 193 aa12.44□□□□□ -0.42
CPSF4-203ENST00000430038 SURF2Q15527 256 aaPredicted RBP12.44□□□□□ -0.42
CPSF4-203ENST00000430038 FAM219AQ8IW50 185 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms