RNA–Protein interactions for RNA: ENST00000429595.1

PTPRK-211, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 3

Gene PTPRK, Length 558 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-211ENST00000429595 BIN3Q9NQY0 253 aa4.74□□□□□ -1.65
PTPRK-211ENST00000429595 MTCH1Q9NZJ7 389 aa4.74□□□□□ -1.65
PTPRK-211ENST00000429595 PRELID1Q9Y255 219 aa4.74□□□□□ -1.65
PTPRK-211ENST00000429595 OR2W1Q9Y3N9 320 aa4.74□□□□□ -1.65
PTPRK-211ENST00000429595 WSB1Q9Y6I7 421 aa4.74□□□□□ -1.65
PTPRK-211ENST00000429595 A0A087WWC5 75 aa4.73□□□□□ -1.65
PTPRK-211ENST00000429595 MEX3AA1L020 520 aaKnown RBP4.73□□□□□ -1.65
PTPRK-211ENST00000429595 ANKRD30BLA7E2S9 258 aa4.73□□□□□ -1.65
PTPRK-211ENST00000429595 B4DEV8 164 aa4.73□□□□□ -1.65
PTPRK-211ENST00000429595 J3QT63 122 aa4.73□□□□□ -1.65
PTPRK-211ENST00000429595 K7N7A8 449 aa4.73□□□□□ -1.65
PTPRK-211ENST00000429595 SAP30O75446 220 aa4.73□□□□□ -1.65
PTPRK-211ENST00000429595 MED6O75586 246 aa4.73□□□□□ -1.65
PTPRK-211ENST00000429595 PGLYRP1O75594 196 aaPredicted RBP4.73□□□□□ -1.65
PTPRK-211ENST00000429595 HBE1P02100 147 aa4.73□□□□□ -1.65
PTPRK-211ENST00000429595 MUC1P15941 1255 aaPredicted RBP4.73□□□□□ -1.65
PTPRK-211ENST00000429595 AADACP22760 399 aa4.73□□□□□ -1.65
PTPRK-211ENST00000429595 F2RP25116 425 aa4.73□□□□□ -1.65
PTPRK-211ENST00000429595 TAGLN2P37802 199 aaKnown RBP4.73□□□□□ -1.65
PTPRK-211ENST00000429595 NKX2-1P43699 371 aaPredicted RBP4.73□□□□□ -1.65
PTPRK-211ENST00000429595 S100A10P60903 97 aa4.73□□□□□ -1.65
PTPRK-211ENST00000429595 SERF2P84101 59 aa4.73□□□□□ -1.65
PTPRK-211ENST00000429595 GUK1Q16774 197 aa4.73□□□□□ -1.65
PTPRK-211ENST00000429595 PIGYQ3MUY2 71 aa4.73□□□□□ -1.65
PTPRK-211ENST00000429595 LCE3CQ5T5A8 94 aa4.73□□□□□ -1.65
PTPRK-211ENST00000429595 Q6P435 159 aa4.73□□□□□ -1.65
PTPRK-211ENST00000429595 MRPL21Q7Z2W9 205 aaKnown RBP4.73□□□□□ -1.65
PTPRK-211ENST00000429595 FAM219AQ8IW50 185 aa4.73□□□□□ -1.65
PTPRK-211ENST00000429595 LINC00518Q8N0U6 118 aa4.73□□□□□ -1.65
PTPRK-211ENST00000429595 FAM58AQ8N1B3 248 aa4.73□□□□□ -1.65
PTPRK-211ENST00000429595 FGFRL1Q8N441 504 aa4.73□□□□□ -1.65
PTPRK-211ENST00000429595 ZNF561Q8N587 486 aa4.73□□□□□ -1.65
PTPRK-211ENST00000429595 TMEM252Q8N6L7 170 aa4.73□□□□□ -1.65
PTPRK-211ENST00000429595 ZNF565Q8N9K5 539 aa4.73□□□□□ -1.65
PTPRK-211ENST00000429595 MRPL30Q8TCC3 161 aaKnown RBP4.73□□□□□ -1.65
PTPRK-211ENST00000429595 MBD3L1Q8WWY6 194 aa4.73□□□□□ -1.65
PTPRK-211ENST00000429595 PSMG3Q9BT73 122 aaPredicted RBP4.73□□□□□ -1.65
PTPRK-211ENST00000429595 SLC35B3Q9H1N7 401 aa4.73□□□□□ -1.65
PTPRK-211ENST00000429595 TREM1Q9NP99 234 aa4.73□□□□□ -1.65
PTPRK-211ENST00000429595 TMEM242Q9NWH2 141 aa4.73□□□□□ -1.65
PTPRK-211ENST00000429595 KIAA1456Q9P272 454 aa4.73□□□□□ -1.65
PTPRK-211ENST00000429595 POLDIP2Q9Y2S7 368 aa4.73□□□□□ -1.65
PTPRK-211ENST00000429595 FAM74A7A6NL05 159 aa4.72□□□□□ -1.65
PTPRK-211ENST00000429595 TGOLN2O43493 480 aa4.72□□□□□ -1.65
PTPRK-211ENST00000429595 RHBDL1O75783 438 aa4.72□□□□□ -1.65
PTPRK-211ENST00000429595 OR7C1O76099 320 aaPredicted RBP4.72□□□□□ -1.65
PTPRK-211ENST00000429595 HSPB1P04792 205 aaKnown RBP4.72□□□□□ -1.65
PTPRK-211ENST00000429595 ARG1P05089 322 aa4.72□□□□□ -1.65
PTPRK-211ENST00000429595 SFTA3P0C7M3 94 aa4.72□□□□□ -1.65
PTPRK-211ENST00000429595 RCC1P18754 421 aaPredicted RBP4.72□□□□□ -1.65
PTPRK-211ENST00000429595 HAAOP46952 286 aa4.72□□□□□ -1.65
PTPRK-211ENST00000429595 RAB2AP61019 212 aa4.72□□□□□ -1.65
PTPRK-211ENST00000429595 EWSR1Q01844 656 aaKnown RBP eCLIP4.72□□□□□ -1.65
PTPRK-211ENST00000429595 MZT1Q08AG7 82 aa4.72□□□□□ -1.65
PTPRK-211ENST00000429595 ATP6V1FQ16864 119 aa4.72□□□□□ -1.65
PTPRK-211ENST00000429595 DEFB136Q30KP8 78 aa4.72□□□□□ -1.65
PTPRK-211ENST00000429595 FAM74A3Q4VXF1 159 aa4.72□□□□□ -1.65
PTPRK-211ENST00000429595 KHDC3LQ587J8 217 aa4.72□□□□□ -1.65
PTPRK-211ENST00000429595 HCP5Q6MZN7 132 aa4.72□□□□□ -1.65
PTPRK-211ENST00000429595 CEMP1Q6PRD7 247 aaPredicted RBP4.72□□□□□ -1.65
PTPRK-211ENST00000429595 Q6ZRG5 221 aa4.72□□□□□ -1.65
PTPRK-211ENST00000429595 LHFPL4Q7Z7J7 247 aa4.72□□□□□ -1.65
PTPRK-211ENST00000429595 TBC1D26Q86UD7 250 aa4.72□□□□□ -1.65
PTPRK-211ENST00000429595 FAM216BQ8N7L0 139 aa4.72□□□□□ -1.65
PTPRK-211ENST00000429595 SLC35G3Q8N808 338 aa4.72□□□□□ -1.65
PTPRK-211ENST00000429595 OR56B2PQ8NGI1 322 aa4.72□□□□□ -1.65
PTPRK-211ENST00000429595 MAFIPQ8WZ33 124 aa4.72□□□□□ -1.65
PTPRK-211ENST00000429595 PINX1Q96BK5 328 aaKnown RBP4.72□□□□□ -1.65
PTPRK-211ENST00000429595 UHRF2Q96PU4 802 aa4.72□□□□□ -1.65
PTPRK-211ENST00000429595 TP53RKQ96S44 253 aa4.72□□□□□ -1.65
PTPRK-211ENST00000429595 FAM110AQ9BQ89 295 aa4.72□□□□□ -1.65
PTPRK-211ENST00000429595 HDHD3Q9BSH5 251 aaPredicted RBP4.72□□□□□ -1.65
PTPRK-211ENST00000429595 RTL8AQ9BWD3 113 aa4.72□□□□□ -1.65
PTPRK-211ENST00000429595 HRH4Q9H3N8 390 aa4.72□□□□□ -1.65
PTPRK-211ENST00000429595 WFDC1Q9HC57 220 aa4.72□□□□□ -1.65
PTPRK-211ENST00000429595 HES4Q9HCC6 221 aa4.72□□□□□ -1.65
PTPRK-211ENST00000429595 OR2S2Q9NQN1 319 aa4.72□□□□□ -1.65
PTPRK-211ENST00000429595 C19orf12Q9NSK7 152 aa4.72□□□□□ -1.65
PTPRK-211ENST00000429595 GAB2Q9UQC2 676 aa4.72□□□□□ -1.65
PTPRK-211ENST00000429595 RCL1Q9Y2P8 373 aaKnown RBP4.72□□□□□ -1.65
PTPRK-211ENST00000429595 TBL2Q9Y4P3 447 aaKnown RBP4.72□□□□□ -1.65
PTPRK-211ENST00000429595 TIMM9Q9Y5J7 89 aa4.72□□□□□ -1.65
PTPRK-211ENST00000429595 TRAV24A0A0B4J272 114 aa4.71□□□□□ -1.66
PTPRK-211ENST00000429595 IGKV1-6A0A0C4DH72 117 aa4.71□□□□□ -1.66
PTPRK-211ENST00000429595 IQCF6A8MYZ5 107 aa4.71□□□□□ -1.66
PTPRK-211ENST00000429595 A8MZ25 164 aa4.71□□□□□ -1.66
PTPRK-211ENST00000429595 ITGB1BP1O14713 200 aa4.71□□□□□ -1.66
PTPRK-211ENST00000429595 TXNL1O43396 289 aa4.71□□□□□ -1.66
PTPRK-211ENST00000429595 PTBP3O95758 552 aaKnown RBP4.71□□□□□ -1.66
PTPRK-211ENST00000429595 S100A8P05109 93 aa4.71□□□□□ -1.66
PTPRK-211ENST00000429595 PGA5P0DJD9 388 aa4.71□□□□□ -1.66
PTPRK-211ENST00000429595 BCL3P20749 454 aa4.71□□□□□ -1.66
PTPRK-211ENST00000429595 BRS3P32247 399 aa4.71□□□□□ -1.66
PTPRK-211ENST00000429595 PCP4P48539 62 aa4.71□□□□□ -1.66
PTPRK-211ENST00000429595 CAMLGP49069 296 aa4.71□□□□□ -1.66
PTPRK-211ENST00000429595 SULT1A1P50225 295 aa4.71□□□□□ -1.66
PTPRK-211ENST00000429595 DYNLT3P51808 116 aa4.71□□□□□ -1.66
PTPRK-211ENST00000429595 PAX9P55771 341 aa4.71□□□□□ -1.66
PTPRK-211ENST00000429595 RAB5BP61020 215 aa4.71□□□□□ -1.66
PTPRK-211ENST00000429595 HLA-DRB3P79483 266 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms