RNA–Protein interactions for RNA: ENST00000428828.1

CECR3-201, Transcript of cat eye syndrome chromosome region, candidate 3, humanhuman

TSL 1 (best) BASIC

Gene CECR3, Length 1,915 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CECR3-201ENST00000428828 GATA4P43694 442 aa9.34□□□□□ -0.91
CECR3-201ENST00000428828 ACSM6Q6P461 480 aa9.34□□□□□ -0.91
CECR3-201ENST00000428828 TMEM14EPQ6UXP3 125 aa9.34□□□□□ -0.91
CECR3-201ENST00000428828 NEGR1Q7Z3B1 354 aa9.34□□□□□ -0.91
CECR3-201ENST00000428828 OR8B3Q8NGG8 313 aa9.34□□□□□ -0.91
CECR3-201ENST00000428828 NINJ1Q92982 152 aa9.34□□□□□ -0.91
CECR3-201ENST00000428828 OR8B2Q96RD0 313 aa9.34□□□□□ -0.91
CECR3-201ENST00000428828 QTRT1Q9BXR0 403 aaKnown RBP9.34□□□□□ -0.91
CECR3-201ENST00000428828 HES4Q9HCC6 221 aa9.34□□□□□ -0.91
CECR3-201ENST00000428828 ITPR2Q14571 2701 aa9.33□□□□□ -0.92
CECR3-201ENST00000428828 BAHCC1Q9P281 2608 aa9.33□□□□□ -0.92
CECR3-201ENST00000428828 FAM90A10PA6NDY2 464 aa9.33□□□□□ -0.92
CECR3-201ENST00000428828 FAM90A18PA6NE21 464 aa9.33□□□□□ -0.92
CECR3-201ENST00000428828 FAM90A16PA6NEW6 464 aa9.33□□□□□ -0.92
CECR3-201ENST00000428828 FAM90A20PA6NIJ5 464 aa9.33□□□□□ -0.92
CECR3-201ENST00000428828 FAM90A8PA6NJQ4 464 aa9.33□□□□□ -0.92
CECR3-201ENST00000428828 FAM90A7PA6NKC0 464 aa9.33□□□□□ -0.92
CECR3-201ENST00000428828 FAM90A22PA8MWA6 464 aa9.33□□□□□ -0.92
CECR3-201ENST00000428828 FAM90A12PA8MX19 464 aa9.33□□□□□ -0.92
CECR3-201ENST00000428828 FAM90A5PA8MXJ8 464 aa9.33□□□□□ -0.92
CECR3-201ENST00000428828 FAM90A23PA8MXZ1 464 aa9.33□□□□□ -0.92
CECR3-201ENST00000428828 SNURFLB1AK76 121 aa9.33□□□□□ -0.92
CECR3-201ENST00000428828 C9JCJ5 164 aa9.33□□□□□ -0.92
CECR3-201ENST00000428828 FAM90A15PP0C7V4 464 aa9.33□□□□□ -0.92
CECR3-201ENST00000428828 FAM90A13PP0C7W8 464 aa9.33□□□□□ -0.92
CECR3-201ENST00000428828 FAM90A14PP0C7W9 464 aa9.33□□□□□ -0.92
CECR3-201ENST00000428828 FAM90A24PP0C7X0 464 aa9.33□□□□□ -0.92
CECR3-201ENST00000428828 IGLL1P15814 213 aa9.33□□□□□ -0.92
CECR3-201ENST00000428828 COL8A2P25067 703 aa9.33□□□□□ -0.92
CECR3-201ENST00000428828 F2RP25116 425 aa9.33□□□□□ -0.92
CECR3-201ENST00000428828 RIPPLY3P57055 190 aa9.33□□□□□ -0.92
CECR3-201ENST00000428828 SLC38A11Q08AI6 406 aa9.33□□□□□ -0.92
CECR3-201ENST00000428828 SCGB2A2Q13296 93 aa9.33□□□□□ -0.92
CECR3-201ENST00000428828 ZNF818PQ6ZRF7 136 aa9.33□□□□□ -0.92
CECR3-201ENST00000428828 GAPTQ8N292 157 aa9.33□□□□□ -0.92
CECR3-201ENST00000428828 NEU4Q8WWR8 484 aaPredicted RBP9.33□□□□□ -0.92
CECR3-201ENST00000428828 IGFBPL1Q8WX77 278 aa9.33□□□□□ -0.92
CECR3-201ENST00000428828 CLEC7AQ9BXN2 247 aa9.33□□□□□ -0.92
CECR3-201ENST00000428828 IL36RNQ9UBH0 155 aa9.33□□□□□ -0.92
CECR3-201ENST00000428828 IGHV3OR15-7A0A075B7D8 119 aa9.33□□□□□ -0.92
CECR3-201ENST00000428828 OR2T8A6NH00 312 aa9.33□□□□□ -0.92
CECR3-201ENST00000428828 LRRC30A6NM36 301 aa9.33□□□□□ -0.92
CECR3-201ENST00000428828 IGHV4-39P01824 125 aa9.33□□□□□ -0.92
CECR3-201ENST00000428828 HLA-DQA1P01909 254 aa9.33□□□□□ -0.92
CECR3-201ENST00000428828 GPR6P46095 362 aaPredicted RBP9.33□□□□□ -0.92
CECR3-201ENST00000428828 ATP5J2P56134 94 aa9.33□□□□□ -0.92
CECR3-201ENST00000428828 FAM58AQ8N1B3 248 aa9.33□□□□□ -0.92
CECR3-201ENST00000428828 GCSAMQ8N6F7 178 aa9.33□□□□□ -0.92
CECR3-201ENST00000428828 OR10V1Q8NGI7 309 aa9.33□□□□□ -0.92
CECR3-201ENST00000428828 TMEM147Q9BVK8 224 aa9.33□□□□□ -0.92
CECR3-201ENST00000428828 SLC25A22Q9H936 323 aa9.33□□□□□ -0.92
CECR3-201ENST00000428828 RNF7Q9UBF6 113 aa9.33□□□□□ -0.92
CECR3-201ENST00000428828 MAP1AP78559 2803 aaPredicted RBP9.32□□□□□ -0.92
CECR3-201ENST00000428828 H3BP45 60 aa9.32□□□□□ -0.92
CECR3-201ENST00000428828 CRXO43186 299 aaPredicted RBP9.32□□□□□ -0.92
CECR3-201ENST00000428828 NDUFB4O95168 129 aa9.32□□□□□ -0.92
CECR3-201ENST00000428828 EFNA4P52798 201 aa9.32□□□□□ -0.92
CECR3-201ENST00000428828 CX3CL1P78423 397 aa9.32□□□□□ -0.92
CECR3-201ENST00000428828 RPEL1Q2QD12 228 aa9.32□□□□□ -0.92
CECR3-201ENST00000428828 VWC2Q2TAL6 325 aa9.32□□□□□ -0.92
CECR3-201ENST00000428828 MPV17L2Q567V2 206 aa9.32□□□□□ -0.92
CECR3-201ENST00000428828 TSKUQ8WUA8 353 aa9.32□□□□□ -0.92
CECR3-201ENST00000428828 GATAD1Q8WUU5 269 aa9.32□□□□□ -0.92
CECR3-201ENST00000428828 RDH5Q92781 318 aa9.32□□□□□ -0.92
CECR3-201ENST00000428828 WNT10AQ9GZT5 417 aa9.32□□□□□ -0.92
CECR3-201ENST00000428828 ODAMA1E959 279 aa9.31□□□□□ -0.92
CECR3-201ENST00000428828 PGLYRP1O75594 196 aaPredicted RBP9.31□□□□□ -0.92
CECR3-201ENST00000428828 NAPSAO96009 420 aa9.31□□□□□ -0.92
CECR3-201ENST00000428828 TFF1P04155 84 aa9.31□□□□□ -0.92
CECR3-201ENST00000428828 PPIAL4GP0DN37 164 aa9.31□□□□□ -0.92
CECR3-201ENST00000428828 PMCHP20382 165 aa9.31□□□□□ -0.92
CECR3-201ENST00000428828 NPY1RP25929 384 aa9.31□□□□□ -0.92
CECR3-201ENST00000428828 IER3P46695 156 aa9.31□□□□□ -0.92
CECR3-201ENST00000428828 CEBPDP49716 269 aaPredicted RBP9.31□□□□□ -0.92
CECR3-201ENST00000428828 SEC11AP67812 179 aa9.31□□□□□ -0.92
CECR3-201ENST00000428828 PDCD1Q15116 288 aa9.31□□□□□ -0.92
CECR3-201ENST00000428828 PIGYQ3MUY2 71 aa9.31□□□□□ -0.92
CECR3-201ENST00000428828 RASL11AQ6T310 242 aa9.31□□□□□ -0.92
CECR3-201ENST00000428828 TMEM136Q6ZRR5 245 aa9.31□□□□□ -0.92
CECR3-201ENST00000428828 OSR2Q8N2R0 312 aa9.31□□□□□ -0.92
CECR3-201ENST00000428828 ZNF114Q8NC26 417 aa9.31□□□□□ -0.92
CECR3-201ENST00000428828 DEFB108BQ8NET1 73 aa9.31□□□□□ -0.92
CECR3-201ENST00000428828 Q8TCH9 128 aa9.31□□□□□ -0.92
CECR3-201ENST00000428828 ATP6V0BQ99437 205 aa9.31□□□□□ -0.92
CECR3-201ENST00000428828 SSBP4Q9BWG4 385 aaPredicted RBP9.31□□□□□ -0.92
CECR3-201ENST00000428828 VPS13CQ709C8 3753 aa9.31□□□□□ -0.92
CECR3-201ENST00000428828 A0A0G2JRQ6 117 aa9.31□□□□□ -0.92
CECR3-201ENST00000428828 UBE2L5PA0A1B0GUS4 154 aa9.31□□□□□ -0.92
CECR3-201ENST00000428828 SRRM5B3KS81 715 aa9.31□□□□□ -0.92
CECR3-201ENST00000428828 TMEM178BH3BS89 294 aa9.31□□□□□ -0.92
CECR3-201ENST00000428828 SAP30O75446 220 aa9.31□□□□□ -0.92
CECR3-201ENST00000428828 ACP7Q6ZNF0 438 aa9.31□□□□□ -0.92
CECR3-201ENST00000428828 ZNF439Q8NDP4 499 aa9.31□□□□□ -0.92
CECR3-201ENST00000428828 OR1B1Q8NGR6 318 aa9.31□□□□□ -0.92
CECR3-201ENST00000428828 C11orf52Q96A22 123 aa9.31□□□□□ -0.92
CECR3-201ENST00000428828 ZNF48Q96MX3 618 aaPredicted RBP9.31□□□□□ -0.92
CECR3-201ENST00000428828 COMMD5Q9GZQ3 224 aa9.31□□□□□ -0.92
CECR3-201ENST00000428828 DOCK11Q5JSL3 2073 aa9.3□□□□□ -0.92
CECR3-201ENST00000428828 ASH1LQ9NR48 2969 aaKnown RBP9.3□□□□□ -0.92
CECR3-201ENST00000428828 TRBV20OR9-2A0A075B6H5 130 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms