RNA–Protein interactions for RNA: ENST00000428776.1

HMGB3P4-201, Transcript of high mobility group box 3 pseudogene 4, humanhuman

BASIC

Gene HMGB3P4, Length 514 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P4-201ENST00000428776 TMEM116Q8NCL8 245 aa9.98□□□□□ -0.81
HMGB3P4-201ENST00000428776 OR2T6Q8NHC8 308 aa9.98□□□□□ -0.81
HMGB3P4-201ENST00000428776 FANCD2OSQ96PS1 177 aa9.98□□□□□ -0.81
HMGB3P4-201ENST00000428776 KCNIP2Q9NS61 270 aa9.98□□□□□ -0.81
HMGB3P4-201ENST00000428776 PLA2G2EQ9NZK7 142 aa9.98□□□□□ -0.81
HMGB3P4-201ENST00000428776 RFNGQ9Y644 331 aa9.98□□□□□ -0.81
HMGB3P4-201ENST00000428776 SVEP1Q4LDE5 3571 aa9.98□□□□□ -0.81
HMGB3P4-201ENST00000428776 HIVEP2P31629 2446 aa9.97□□□□□ -0.81
HMGB3P4-201ENST00000428776 K7EIM0 57 aa9.97□□□□□ -0.81
HMGB3P4-201ENST00000428776 AGPAT2O15120 278 aa9.97□□□□□ -0.81
HMGB3P4-201ENST00000428776 BRI3O95415 125 aa9.97□□□□□ -0.81
HMGB3P4-201ENST00000428776 PRH1P02810 166 aa9.97□□□□□ -0.81
HMGB3P4-201ENST00000428776 CAMLGP49069 296 aa9.97□□□□□ -0.81
HMGB3P4-201ENST00000428776 AKR1C8PQ5T2L2 129 aa9.97□□□□□ -0.81
HMGB3P4-201ENST00000428776 Q6ZS46 218 aa9.97□□□□□ -0.81
HMGB3P4-201ENST00000428776 THAP8Q8NA92 274 aa9.97□□□□□ -0.81
HMGB3P4-201ENST00000428776 NPIPB3Q92617 1050 aa9.97□□□□□ -0.81
HMGB3P4-201ENST00000428776 SAT2Q96F10 170 aaPredicted RBP9.97□□□□□ -0.81
HMGB3P4-201ENST00000428776 ACY3Q96HD9 319 aa9.97□□□□□ -0.81
HMGB3P4-201ENST00000428776 MGST2Q99735 147 aa9.97□□□□□ -0.81
HMGB3P4-201ENST00000428776 IGKV1OR2-108A0A075B7D4 117 aa9.96□□□□□ -0.82
HMGB3P4-201ENST00000428776 TRBV9A0A0B4J1U6 114 aa9.96□□□□□ -0.82
HMGB3P4-201ENST00000428776 DNAJC9-AS1A6NH13 148 aa9.96□□□□□ -0.82
HMGB3P4-201ENST00000428776 H3BUA1 57 aa9.96□□□□□ -0.82
HMGB3P4-201ENST00000428776 CLDN34H7C241 214 aa9.96□□□□□ -0.82
HMGB3P4-201ENST00000428776 IGHV3-48P01763 117 aa9.96□□□□□ -0.82
HMGB3P4-201ENST00000428776 MBP02144 154 aa9.96□□□□□ -0.82
HMGB3P4-201ENST00000428776 NMBP08949 121 aa9.96□□□□□ -0.82
HMGB3P4-201ENST00000428776 RPL29P47914 159 aaKnown RBP9.96□□□□□ -0.82
HMGB3P4-201ENST00000428776 RND2P52198 227 aa9.96□□□□□ -0.82
HMGB3P4-201ENST00000428776 BLOC1S1P78537 153 aa9.96□□□□□ -0.82
HMGB3P4-201ENST00000428776 DPPA3Q6W0C5 159 aa9.96□□□□□ -0.82
HMGB3P4-201ENST00000428776 NECAP1Q8NC96 275 aa9.96□□□□□ -0.82
HMGB3P4-201ENST00000428776 OR4X1Q8NH49 305 aa9.96□□□□□ -0.82
HMGB3P4-201ENST00000428776 VN1R17PQ8TDU5 208 aa9.96□□□□□ -0.82
HMGB3P4-201ENST00000428776 ZNF418Q8TF45 676 aaPredicted RBP9.96□□□□□ -0.82
HMGB3P4-201ENST00000428776 GGTLC1Q9BX51 225 aa9.96□□□□□ -0.82
HMGB3P4-201ENST00000428776 ZNF355PQ9NSJ1 428 aa9.96□□□□□ -0.82
HMGB3P4-201ENST00000428776 FBXL7Q9UJT9 491 aa9.96□□□□□ -0.82
HMGB3P4-201ENST00000428776 NSD1Q96L73 2696 aaPredicted RBP9.96□□□□□ -0.82
HMGB3P4-201ENST00000428776 ZNF705EA8MWA4 302 aaPredicted RBP9.95□□□□□ -0.82
HMGB3P4-201ENST00000428776 OR2J3O76001 311 aa9.95□□□□□ -0.82
HMGB3P4-201ENST00000428776 NDUFB8O95169 186 aa9.95□□□□□ -0.82
HMGB3P4-201ENST00000428776 PPIFP30405 207 aaKnown RBP9.95□□□□□ -0.82
HMGB3P4-201ENST00000428776 OR10J1P30954 320 aa9.95□□□□□ -0.82
HMGB3P4-201ENST00000428776 NDUFA5Q16718 116 aa9.95□□□□□ -0.82
HMGB3P4-201ENST00000428776 TMEM41BQ5BJD5 291 aa9.95□□□□□ -0.82
HMGB3P4-201ENST00000428776 FFAR4Q5NUL3 377 aa9.95□□□□□ -0.82
HMGB3P4-201ENST00000428776 ACSM6Q6P461 480 aa9.95□□□□□ -0.82
HMGB3P4-201ENST00000428776 MRPL36Q9P0J6 103 aaKnown RBP9.95□□□□□ -0.82
HMGB3P4-201ENST00000428776 LINC00527Q9UJ94 153 aa9.95□□□□□ -0.82
HMGB3P4-201ENST00000428776 SLC45A2Q9UMX9 530 aa9.95□□□□□ -0.82
HMGB3P4-201ENST00000428776 MTORP42345 2549 aa9.94□□□□□ -0.82
HMGB3P4-201ENST00000428776 IGKV1D-37A0A075B6S9 117 aa9.94□□□□□ -0.82
HMGB3P4-201ENST00000428776 TRAV30A0A087WSZ9 112 aa9.94□□□□□ -0.82
HMGB3P4-201ENST00000428776 IGHV3-21A0A0B4J1V1 117 aa9.94□□□□□ -0.82
HMGB3P4-201ENST00000428776 TCRBV4S1A1TA0A5B7 111 aa9.94□□□□□ -0.82
HMGB3P4-201ENST00000428776 ZFP92A6NM28 416 aa9.94□□□□□ -0.82
HMGB3P4-201ENST00000428776 CLN5O75503 358 aa9.94□□□□□ -0.82
HMGB3P4-201ENST00000428776 TSPAN15O95858 294 aa9.94□□□□□ -0.82
HMGB3P4-201ENST00000428776 NPBWR1P48145 328 aa9.94□□□□□ -0.82
HMGB3P4-201ENST00000428776 MFAP4P55083 255 aa9.94□□□□□ -0.82
HMGB3P4-201ENST00000428776 RPL15P61313 204 aaKnown RBP9.94□□□□□ -0.82
HMGB3P4-201ENST00000428776 SELENOTP62341 195 aa9.94□□□□□ -0.82
HMGB3P4-201ENST00000428776 RHOGP84095 191 aa9.94□□□□□ -0.82
HMGB3P4-201ENST00000428776 ACOT6Q3I5F7 207 aaPredicted RBP9.94□□□□□ -0.82
HMGB3P4-201ENST00000428776 Q8N2B8 174 aa9.94□□□□□ -0.82
HMGB3P4-201ENST00000428776 PCNPQ8WW12 178 aaKnown RBP9.94□□□□□ -0.82
HMGB3P4-201ENST00000428776 CXorf58Q96LI9 332 aa9.94□□□□□ -0.82
HMGB3P4-201ENST00000428776 NOL4LQ96MY1 436 aaPredicted RBP9.94□□□□□ -0.82
HMGB3P4-201ENST00000428776 DUX5Q96PT3 197 aa9.94□□□□□ -0.82
HMGB3P4-201ENST00000428776 TRGV9Q99603 122 aa9.94□□□□□ -0.82
HMGB3P4-201ENST00000428776 TXN2Q99757 166 aa9.94□□□□□ -0.82
HMGB3P4-201ENST00000428776 ZNF702PQ9H963 129 aa9.94□□□□□ -0.82
HMGB3P4-201ENST00000428776 C21orf62Q9NYP8 219 aa9.94□□□□□ -0.82
HMGB3P4-201ENST00000428776 PXMP4Q9Y6I8 212 aa9.94□□□□□ -0.82
HMGB3P4-201ENST00000428776 NF1P21359 2839 aa9.93□□□□□ -0.82
HMGB3P4-201ENST00000428776 TMEM89A2RUT3 159 aa9.93□□□□□ -0.82
HMGB3P4-201ENST00000428776 FAM223BA6NKX1 122 aa9.93□□□□□ -0.82
HMGB3P4-201ENST00000428776 IGLV1-40P01703 118 aa9.93□□□□□ -0.82
HMGB3P4-201ENST00000428776 FABP1P07148 127 aa9.93□□□□□ -0.82
HMGB3P4-201ENST00000428776 LINC00869P0C866 280 aa9.93□□□□□ -0.82
HMGB3P4-201ENST00000428776 M6PRP20645 277 aa9.93□□□□□ -0.82
HMGB3P4-201ENST00000428776 FCGR2BP31994 310 aaPredicted RBP9.93□□□□□ -0.82
HMGB3P4-201ENST00000428776 ELLP55199 621 aaPredicted RBP9.93□□□□□ -0.82
HMGB3P4-201ENST00000428776 B2MP61769 119 aa9.93□□□□□ -0.82
HMGB3P4-201ENST00000428776 PRR20EP86478 221 aa9.93□□□□□ -0.82
HMGB3P4-201ENST00000428776 PRR20CP86479 221 aa9.93□□□□□ -0.82
HMGB3P4-201ENST00000428776 PRR20DP86480 221 aa9.93□□□□□ -0.82
HMGB3P4-201ENST00000428776 PRR20BP86481 221 aa9.93□□□□□ -0.82
HMGB3P4-201ENST00000428776 PRR20AP86496 221 aa9.93□□□□□ -0.82
HMGB3P4-201ENST00000428776 CFHR3Q02985 330 aa9.93□□□□□ -0.82
HMGB3P4-201ENST00000428776 C15orf32Q32M92 178 aa9.93□□□□□ -0.82
HMGB3P4-201ENST00000428776 MIC13Q5XKP0 118 aa9.93□□□□□ -0.82
HMGB3P4-201ENST00000428776 Q6ZRG5 221 aa9.93□□□□□ -0.82
HMGB3P4-201ENST00000428776 CYP2G1PQ6ZSU1 146 aa9.93□□□□□ -0.82
HMGB3P4-201ENST00000428776 FAM223AQ8IWN6 122 aa9.93□□□□□ -0.82
HMGB3P4-201ENST00000428776 STPG3Q8N7X2 389 aa9.93□□□□□ -0.82
HMGB3P4-201ENST00000428776 FAM213BQ8TBF2 198 aa9.93□□□□□ -0.82
HMGB3P4-201ENST00000428776 JMJD8Q96S16 334 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms