RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 TERB2Q8NHR7 220 aa11.34□□□□□ -0.59
SEC13-210ENST00000428626 MARCH1Q8TCQ1 289 aa11.34□□□□□ -0.59
SEC13-210ENST00000428626 GATAD1Q8WUU5 269 aa11.34□□□□□ -0.59
SEC13-210ENST00000428626 GINS3Q9BRX5 216 aa11.34□□□□□ -0.59
SEC13-210ENST00000428626 C6orf62Q9GZU0 229 aaPredicted RBP11.34□□□□□ -0.59
SEC13-210ENST00000428626 CA1P00915 261 aaPredicted RBP11.33□□□□□ -0.6
SEC13-210ENST00000428626 IGKV1-17P01599 117 aa11.33□□□□□ -0.6
SEC13-210ENST00000428626 TBPP20226 339 aa11.33□□□□□ -0.6
SEC13-210ENST00000428626 CMC4P56277 68 aaPredicted RBP11.33□□□□□ -0.6
SEC13-210ENST00000428626 TRIM16LQ309B1 348 aa11.33□□□□□ -0.6
SEC13-210ENST00000428626 TMEM229BQ8NBD8 167 aa11.33□□□□□ -0.6
SEC13-210ENST00000428626 RTBDNQ9BSG5 229 aaPredicted RBP11.33□□□□□ -0.6
SEC13-210ENST00000428626 KLK5Q9Y337 293 aaPredicted RBP11.33□□□□□ -0.6
SEC13-210ENST00000428626 CLN5O75503 358 aa11.32□□□□□ -0.6
SEC13-210ENST00000428626 RAB3DO95716 219 aa11.32□□□□□ -0.6
SEC13-210ENST00000428626 HOXA1P49639 335 aaPredicted RBP11.32□□□□□ -0.6
SEC13-210ENST00000428626 PAFAH1B2P68402 229 aa11.32□□□□□ -0.6
SEC13-210ENST00000428626 TIGITQ495A1 244 aa11.32□□□□□ -0.6
SEC13-210ENST00000428626 SCGB2B2Q4G0G5 96 aa11.32□□□□□ -0.6
SEC13-210ENST00000428626 AARDQ4LEZ3 155 aa11.32□□□□□ -0.6
SEC13-210ENST00000428626 GPR107Q5VW38 600 aa11.32□□□□□ -0.6
SEC13-210ENST00000428626 TMEM217Q8N7C4 229 aa11.32□□□□□ -0.6
SEC13-210ENST00000428626 OR4X1Q8NH49 305 aa11.32□□□□□ -0.6
SEC13-210ENST00000428626 GLYATL2Q8WU03 294 aa11.32□□□□□ -0.6
SEC13-210ENST00000428626 C11orf68Q9H3H3 251 aaKnown RBP11.32□□□□□ -0.6
SEC13-210ENST00000428626 COPZ2Q9P299 210 aa11.32□□□□□ -0.6
SEC13-210ENST00000428626 TRAV2A0A0B4J234 112 aa11.31□□□□□ -0.6
SEC13-210ENST00000428626 DNASE2O00115 360 aaPredicted RBP11.31□□□□□ -0.6
SEC13-210ENST00000428626 CTDSP2O14595 271 aa11.31□□□□□ -0.6
SEC13-210ENST00000428626 CDS2O95674 445 aa11.31□□□□□ -0.6
SEC13-210ENST00000428626 OR5AC1P0C628 307 aa11.31□□□□□ -0.6
SEC13-210ENST00000428626 CRYBB3P26998 211 aa11.31□□□□□ -0.6
SEC13-210ENST00000428626 OPRK1P41145 380 aa11.31□□□□□ -0.6
SEC13-210ENST00000428626 RPL11P62913 178 aaKnown RBP11.31□□□□□ -0.6
SEC13-210ENST00000428626 STEAP1BQ6NZ63 245 aa11.31□□□□□ -0.6
SEC13-210ENST00000428626 ZFAND1Q8TCF1 268 aa11.31□□□□□ -0.6
SEC13-210ENST00000428626 TMEM170AQ8WVE7 144 aa11.31□□□□□ -0.6
SEC13-210ENST00000428626 AP3S1Q92572 193 aa11.31□□□□□ -0.6
SEC13-210ENST00000428626 TMEM222Q9H0R3 208 aa11.31□□□□□ -0.6
SEC13-210ENST00000428626 RABAC1Q9UI14 185 aa11.31□□□□□ -0.6
SEC13-210ENST00000428626 K7EQG2 157 aa11.3□□□□□ -0.6
SEC13-210ENST00000428626 CD5P06127 495 aa11.3□□□□□ -0.6
SEC13-210ENST00000428626 NPPCP23582 126 aa11.3□□□□□ -0.6
SEC13-210ENST00000428626 RPL5P46777 297 aaKnown RBP11.3□□□□□ -0.6
SEC13-210ENST00000428626 TAS2R19P59542 299 aa11.3□□□□□ -0.6
SEC13-210ENST00000428626 SPCS2Q15005 226 aa11.3□□□□□ -0.6
SEC13-210ENST00000428626 RBMS2Q15434 407 aaKnown RBP11.3□□□□□ -0.6
SEC13-210ENST00000428626 SELENOHQ8IZQ5 122 aaKnown RBP11.3□□□□□ -0.6
SEC13-210ENST00000428626 CCDC71LQ8N9Z2 235 aa11.3□□□□□ -0.6
SEC13-210ENST00000428626 C11orf45Q8TAV5 145 aa11.3□□□□□ -0.6
SEC13-210ENST00000428626 DCANP1Q8TF63 244 aa11.3□□□□□ -0.6
SEC13-210ENST00000428626 GPR146Q96CH1 333 aa11.3□□□□□ -0.6
SEC13-210ENST00000428626 RRNAD1Q96FB5 475 aaKnown RBP11.3□□□□□ -0.6
SEC13-210ENST00000428626 PDCD10Q9BUL8 212 aa11.3□□□□□ -0.6
SEC13-210ENST00000428626 FBXL17Q9UF56 701 aa11.3□□□□□ -0.6
SEC13-210ENST00000428626 DNAH6Q9C0G6 4158 aa11.3□□□□□ -0.6
SEC13-210ENST00000428626 KNCNA6PVL3 124 aa11.29□□□□□ -0.6
SEC13-210ENST00000428626 GABARAPH6UMI1 98 aa11.29□□□□□ -0.6
SEC13-210ENST00000428626 CORTO00230 105 aa11.29□□□□□ -0.6
SEC13-210ENST00000428626 ATG12O94817 140 aa11.29□□□□□ -0.6
SEC13-210ENST00000428626 C4BPBP20851 252 aa11.29□□□□□ -0.6
SEC13-210ENST00000428626 P2RY1P47900 373 aa11.29□□□□□ -0.6
SEC13-210ENST00000428626 SUB1P53999 127 aaKnown RBP eCLIP11.29□□□□□ -0.6
SEC13-210ENST00000428626 PRR20EP86478 221 aa11.29□□□□□ -0.6
SEC13-210ENST00000428626 PRR20CP86479 221 aa11.29□□□□□ -0.6
SEC13-210ENST00000428626 PRR20DP86480 221 aa11.29□□□□□ -0.6
SEC13-210ENST00000428626 PRR20BP86481 221 aa11.29□□□□□ -0.6
SEC13-210ENST00000428626 PRR20AP86496 221 aa11.29□□□□□ -0.6
SEC13-210ENST00000428626 TMEM187Q14656 261 aa11.29□□□□□ -0.6
SEC13-210ENST00000428626 MEF2DQ14814 521 aa11.29□□□□□ -0.6
SEC13-210ENST00000428626 LGALS9CQ6DKI2 356 aa11.29□□□□□ -0.6
SEC13-210ENST00000428626 TRPT1Q86TN4 253 aaKnown RBP11.29□□□□□ -0.6
SEC13-210ENST00000428626 Q8NAQ8 132 aa11.29□□□□□ -0.6
SEC13-210ENST00000428626 STXBP6Q8NFX7 210 aa11.29□□□□□ -0.6
SEC13-210ENST00000428626 U3KQE9 123 aa11.29□□□□□ -0.6
SEC13-210ENST00000428626 TEX13DA0A0J9YY54 714 aaPredicted RBP11.28□□□□□ -0.6
SEC13-210ENST00000428626 NXPH3O95157 252 aa11.28□□□□□ -0.6
SEC13-210ENST00000428626 ZNF688P0C7X2 276 aa11.28□□□□□ -0.6
SEC13-210ENST00000428626 IGLC1P0CG04 106 aa11.28□□□□□ -0.6
SEC13-210ENST00000428626 RBMY1A1P0DJD3 496 aaKnown RBP11.28□□□□□ -0.6
SEC13-210ENST00000428626 RBMY1CP0DJD4 496 aa11.28□□□□□ -0.6
SEC13-210ENST00000428626 SPCS3P61009 180 aa11.28□□□□□ -0.6
SEC13-210ENST00000428626 RBMY1FQ15415 496 aaKnown RBP11.28□□□□□ -0.6
SEC13-210ENST00000428626 PRSS54Q6PEW0 395 aa11.28□□□□□ -0.6
SEC13-210ENST00000428626 OR4C16Q8NGL9 310 aa11.28□□□□□ -0.6
SEC13-210ENST00000428626 OR52E5Q8NH55 327 aa11.28□□□□□ -0.6
SEC13-210ENST00000428626 RNASE11Q8TAA1 199 aaKnown RBP11.28□□□□□ -0.6
SEC13-210ENST00000428626 METTL26Q96S19 204 aa11.28□□□□□ -0.6
SEC13-210ENST00000428626 NAA60Q9H7X0 242 aa11.28□□□□□ -0.6
SEC13-210ENST00000428626 ENY2Q9NPA8 101 aa11.28□□□□□ -0.6
SEC13-210ENST00000428626 PRR13Q9NZ81 148 aa11.28□□□□□ -0.6
SEC13-210ENST00000428626 CACNG5Q9UF02 275 aa11.28□□□□□ -0.6
SEC13-210ENST00000428626 GPR132Q9UNW8 380 aa11.28□□□□□ -0.6
SEC13-210ENST00000428626 ALDH3B2P48448 385 aa11.27□□□□□ -0.61
SEC13-210ENST00000428626 RND2P52198 227 aa11.27□□□□□ -0.61
SEC13-210ENST00000428626 C2orf83Q53S99 150 aa11.27□□□□□ -0.61
SEC13-210ENST00000428626 FAM219AQ8IW50 185 aa11.27□□□□□ -0.61
SEC13-210ENST00000428626 SMIM4Q8WVI0 70 aa11.27□□□□□ -0.61
SEC13-210ENST00000428626 RBPMSQ93062 196 aaKnown RBP11.27□□□□□ -0.61
SEC13-210ENST00000428626 TMEM230Q96A57 120 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms