RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 TMEM231Q9H6L2 316 aa12.01□□□□□ -0.49
VARS-216ENST00000428445 ELOA3CA0A087WX78 387 aaPredicted RBP12□□□□□ -0.49
VARS-216ENST00000428445 A0A1W2PS18 150 aa12□□□□□ -0.49
VARS-216ENST00000428445 PI3P19957 117 aa12□□□□□ -0.49
VARS-216ENST00000428445 TBPP20226 339 aa12□□□□□ -0.49
VARS-216ENST00000428445 C4BPBP20851 252 aa12□□□□□ -0.49
VARS-216ENST00000428445 HLA-DMBP28068 263 aa12□□□□□ -0.49
VARS-216ENST00000428445 RORCP51449 518 aa12□□□□□ -0.49
VARS-216ENST00000428445 TMEM41BQ5BJD5 291 aa12□□□□□ -0.49
VARS-216ENST00000428445 Q6ZTC4 211 aa12□□□□□ -0.49
VARS-216ENST00000428445 ZNF767PQ75MW2 155 aa12□□□□□ -0.49
VARS-216ENST00000428445 ARRDC1Q8N5I2 433 aa12□□□□□ -0.49
VARS-216ENST00000428445 M0QYG6 137 aa11.99□□□□□ -0.49
VARS-216ENST00000428445 SCGB2A1O75556 95 aa11.99□□□□□ -0.49
VARS-216ENST00000428445 IGKV1-5P01602 117 aa11.99□□□□□ -0.49
VARS-216ENST00000428445 NPPCP23582 126 aa11.99□□□□□ -0.49
VARS-216ENST00000428445 RPL5P46777 297 aaKnown RBP11.99□□□□□ -0.49
VARS-216ENST00000428445 MZT2AQ6P582 158 aa11.99□□□□□ -0.49
VARS-216ENST00000428445 SNX29P2Q8IUI4 249 aa11.99□□□□□ -0.49
VARS-216ENST00000428445 STXBP6Q8NFX7 210 aa11.99□□□□□ -0.49
VARS-216ENST00000428445 ZFAND1Q8TCF1 268 aa11.99□□□□□ -0.49
VARS-216ENST00000428445 PKHD1P08F94 4074 aa11.99□□□□□ -0.49
VARS-216ENST00000428445 DYNC1H1Q14204 4646 aaKnown RBP11.98□□□□□ -0.49
VARS-216ENST00000428445 A0A0B4J293 547 aa11.98□□□□□ -0.49
VARS-216ENST00000428445 IFNA17P01571 189 aa11.98□□□□□ -0.49
VARS-216ENST00000428445 ZNF688P0C7X2 276 aa11.98□□□□□ -0.49
VARS-216ENST00000428445 ELK1P19419 428 aa11.98□□□□□ -0.49
VARS-216ENST00000428445 ETV6P41212 452 aa11.98□□□□□ -0.49
VARS-216ENST00000428445 RNASE12Q5GAN4 147 aaKnown RBP11.98□□□□□ -0.49
VARS-216ENST00000428445 TRPT1Q86TN4 253 aaKnown RBP11.98□□□□□ -0.49
VARS-216ENST00000428445 LHFPL1Q86WI0 220 aa11.98□□□□□ -0.49
VARS-216ENST00000428445 PDCD10Q9BUL8 212 aa11.98□□□□□ -0.49
VARS-216ENST00000428445 FUNDC2Q9BWH2 189 aa11.98□□□□□ -0.49
VARS-216ENST00000428445 SCRT1Q9BWW7 348 aa11.98□□□□□ -0.49
VARS-216ENST00000428445 FNDC4Q9H6D8 234 aaPredicted RBP11.98□□□□□ -0.49
VARS-216ENST00000428445 X6R8D5 127 aa11.98□□□□□ -0.49
VARS-216ENST00000428445 TRAV30A0A087WSZ9 112 aa11.97□□□□□ -0.49
VARS-216ENST00000428445 K7EQG2 157 aa11.97□□□□□ -0.49
VARS-216ENST00000428445 P0C879 139 aa11.97□□□□□ -0.49
VARS-216ENST00000428445 RNASE2P10153 161 aaKnown RBP11.97□□□□□ -0.49
VARS-216ENST00000428445 PGAM2P15259 253 aa11.97□□□□□ -0.49
VARS-216ENST00000428445 PIGPP57054 158 aa11.97□□□□□ -0.49
VARS-216ENST00000428445 RNASE10Q5GAN6 216 aaKnown RBP11.97□□□□□ -0.49
VARS-216ENST00000428445 SLC35G3Q8N808 338 aa11.97□□□□□ -0.49
VARS-216ENST00000428445 OR4X1Q8NH49 305 aa11.97□□□□□ -0.49
VARS-216ENST00000428445 TERB2Q8NHR7 220 aa11.97□□□□□ -0.49
VARS-216ENST00000428445 AP3S1Q92572 193 aa11.97□□□□□ -0.49
VARS-216ENST00000428445 TP53RKQ96S44 253 aa11.97□□□□□ -0.49
VARS-216ENST00000428445 CELA1Q9UNI1 258 aa11.97□□□□□ -0.49
VARS-216ENST00000428445 RYR1P21817 5038 aa11.96□□□□□ -0.49
VARS-216ENST00000428445 IGHV4-4A0A075B6R2 117 aa11.96□□□□□ -0.49
VARS-216ENST00000428445 C3orf85A0A1B0GTC6 90 aa11.96□□□□□ -0.49
VARS-216ENST00000428445 CLN5O75503 358 aa11.96□□□□□ -0.49
VARS-216ENST00000428445 P2RY1P47900 373 aa11.96□□□□□ -0.49
VARS-216ENST00000428445 AKR1C2P52895 323 aa11.96□□□□□ -0.49
VARS-216ENST00000428445 VBP1P61758 197 aa11.96□□□□□ -0.49
VARS-216ENST00000428445 SP6Q3SY56 376 aa11.96□□□□□ -0.49
VARS-216ENST00000428445 TIGITQ495A1 244 aa11.96□□□□□ -0.49
VARS-216ENST00000428445 ACTL10Q5JWF8 245 aa11.96□□□□□ -0.49
VARS-216ENST00000428445 FAM219AQ8IW50 185 aa11.96□□□□□ -0.49
VARS-216ENST00000428445 CCDC71LQ8N9Z2 235 aa11.96□□□□□ -0.49
VARS-216ENST00000428445 RRNAD1Q96FB5 475 aaKnown RBP11.96□□□□□ -0.49
VARS-216ENST00000428445 GRAMD2BQ96HH9 432 aa11.96□□□□□ -0.49
VARS-216ENST00000428445 NARS2Q96I59 477 aaKnown RBP11.96□□□□□ -0.49
VARS-216ENST00000428445 HRH4Q9H3N8 390 aa11.96□□□□□ -0.49
VARS-216ENST00000428445 ENY2Q9NPA8 101 aa11.96□□□□□ -0.49
VARS-216ENST00000428445 KLK11Q9UBX7 282 aa11.96□□□□□ -0.49
VARS-216ENST00000428445 MTFP1Q9UDX5 166 aa11.96□□□□□ -0.49
VARS-216ENST00000428445 CACFD1Q9UGQ2 172 aa11.96□□□□□ -0.49
VARS-216ENST00000428445 A0A0G2JRQ6 117 aa11.95□□□□□ -0.5
VARS-216ENST00000428445 C11orf94C9JXX5 98 aa11.95□□□□□ -0.5
VARS-216ENST00000428445 HPGDSO60760 199 aa11.95□□□□□ -0.5
VARS-216ENST00000428445 CRYBB3P26998 211 aa11.95□□□□□ -0.5
VARS-216ENST00000428445 NCS1P62166 190 aa11.95□□□□□ -0.5
VARS-216ENST00000428445 OR52E5Q8NH55 327 aa11.95□□□□□ -0.5
VARS-216ENST00000428445 TMEM230Q96A57 120 aa11.95□□□□□ -0.5
VARS-216ENST00000428445 METTL26Q96S19 204 aa11.95□□□□□ -0.5
VARS-216ENST00000428445 COPZ2Q9P299 210 aa11.95□□□□□ -0.5
VARS-216ENST00000428445 PKD1P98161 4303 aa11.94□□□□□ -0.5
VARS-216ENST00000428445 ZNF705EA8MWA4 302 aaPredicted RBP11.94□□□□□ -0.5
VARS-216ENST00000428445 FAM25AB3EWG3 89 aa11.94□□□□□ -0.5
VARS-216ENST00000428445 FAM25CB3EWG5 89 aa11.94□□□□□ -0.5
VARS-216ENST00000428445 FAM25GB3EWG6 89 aa11.94□□□□□ -0.5
VARS-216ENST00000428445 CD3DP04234 171 aa11.94□□□□□ -0.5
VARS-216ENST00000428445 ZNF182P17025 639 aaPredicted RBP11.94□□□□□ -0.5
VARS-216ENST00000428445 UCP1P25874 307 aa11.94□□□□□ -0.5
VARS-216ENST00000428445 EIF2B2P49770 351 aaKnown RBP11.94□□□□□ -0.5
VARS-216ENST00000428445 AP2S1P53680 142 aaPredicted RBP11.94□□□□□ -0.5
VARS-216ENST00000428445 AARDQ4LEZ3 155 aa11.94□□□□□ -0.5
VARS-216ENST00000428445 MORN3Q6PF18 240 aaPredicted RBP11.94□□□□□ -0.5
VARS-216ENST00000428445 TMEM229BQ8NBD8 167 aa11.94□□□□□ -0.5
VARS-216ENST00000428445 CSNK1G2-AS1Q8NCQ2 148 aa11.94□□□□□ -0.5
VARS-216ENST00000428445 DCANP1Q8TF63 244 aa11.94□□□□□ -0.5
VARS-216ENST00000428445 TRAV10A0A0B4J240 114 aa11.93□□□□□ -0.5
VARS-216ENST00000428445 RPS10-NUDT3A0A1W2PQS6 291 aa11.93□□□□□ -0.5
VARS-216ENST00000428445 M0R2N4 97 aa11.93□□□□□ -0.5
VARS-216ENST00000428445 IGKV1-17P01599 117 aa11.93□□□□□ -0.5
VARS-216ENST00000428445 CD74P04233 296 aa11.93□□□□□ -0.5
VARS-216ENST00000428445 SPP1P10451 314 aa11.93□□□□□ -0.5
VARS-216ENST00000428445 MIFP14174 115 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms