RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 POLR3KQ9Y2Y1 108 aaPredicted RBP10.94□□□□□ -0.66
USP42-203ENST00000426246 TBL2Q9Y4P3 447 aaKnown RBP10.94□□□□□ -0.66
USP42-203ENST00000426246 RBP4P02753 201 aa10.94□□□□□ -0.66
USP42-203ENST00000426246 GBGT1Q8N5D6 347 aa10.94□□□□□ -0.66
USP42-203ENST00000426246 ZNF586Q9NXT0 402 aa10.94□□□□□ -0.66
USP42-203ENST00000426246 SH2D7A6NKC9 451 aaPredicted RBP10.93□□□□□ -0.66
USP42-203ENST00000426246 MKRN2OSH3BPM6 223 aa10.93□□□□□ -0.66
USP42-203ENST00000426246 C15orf65H3BRN8 121 aa10.93□□□□□ -0.66
USP42-203ENST00000426246 CNIH1O95406 144 aa10.93□□□□□ -0.66
USP42-203ENST00000426246 SRP14P37108 136 aaKnown RBP10.93□□□□□ -0.66
USP42-203ENST00000426246 SRSF7Q16629 238 aaKnown RBP eCLIP10.93□□□□□ -0.66
USP42-203ENST00000426246 ACTL10Q5JWF8 245 aa10.93□□□□□ -0.66
USP42-203ENST00000426246 Q6ZN92 141 aa10.93□□□□□ -0.66
USP42-203ENST00000426246 EAF1Q96JC9 268 aaPredicted RBP10.93□□□□□ -0.66
USP42-203ENST00000426246 STAG3L2P0CL84 134 aa10.93□□□□□ -0.66
USP42-203ENST00000426246 STAG3L3P0CL85 134 aa10.93□□□□□ -0.66
USP42-203ENST00000426246 NDUFAF3Q9BU61 184 aa10.93□□□□□ -0.66
USP42-203ENST00000426246 GNB4Q9HAV0 340 aa10.93□□□□□ -0.66
USP42-203ENST00000426246 HES4Q9HCC6 221 aa10.93□□□□□ -0.66
USP42-203ENST00000426246 TMEM242Q9NWH2 141 aa10.93□□□□□ -0.66
USP42-203ENST00000426246 TIMM9Q9Y5J7 89 aa10.93□□□□□ -0.66
USP42-203ENST00000426246 ZFYVE26Q68DK2 2539 aa10.93□□□□□ -0.66
USP42-203ENST00000426246 SRRM5B3KS81 715 aa10.92□□□□□ -0.66
USP42-203ENST00000426246 E7EUB6 86 aa10.92□□□□□ -0.66
USP42-203ENST00000426246 IGKV3-15P01624 115 aa10.92□□□□□ -0.66
USP42-203ENST00000426246 LYZP61626 148 aa10.92□□□□□ -0.66
USP42-203ENST00000426246 TCF24Q7RTU0 167 aa10.92□□□□□ -0.66
USP42-203ENST00000426246 RCHY1Q96PM5 261 aa10.92□□□□□ -0.66
USP42-203ENST00000426246 IDI2-AS1Q9NZ38 188 aa10.92□□□□□ -0.66
USP42-203ENST00000426246 ARL2-SNX15V9GYD0 113 aa10.92□□□□□ -0.66
USP42-203ENST00000426246 POLQO75417 2590 aa10.92□□□□□ -0.66
USP42-203ENST00000426246 TRAV8-1A0A0A6YYK1 113 aa10.92□□□□□ -0.66
USP42-203ENST00000426246 ZNF138P52744 262 aa10.92□□□□□ -0.66
USP42-203ENST00000426246 RPL8P62917 257 aaKnown RBP10.92□□□□□ -0.66
USP42-203ENST00000426246 Q6ZWC4 215 aa10.92□□□□□ -0.66
USP42-203ENST00000426246 TPSG1Q9NRR2 321 aa10.92□□□□□ -0.66
USP42-203ENST00000426246 SLC45A2Q9UMX9 530 aa10.92□□□□□ -0.66
USP42-203ENST00000426246 MMDQ15546 238 aa10.92□□□□□ -0.66
USP42-203ENST00000426246 C1orf162Q8NEQ5 155 aaPredicted RBP10.92□□□□□ -0.66
USP42-203ENST00000426246 IL19Q9UHD0 177 aa10.92□□□□□ -0.66
USP42-203ENST00000426246 JPT1Q9UK76 154 aa10.92□□□□□ -0.66
USP42-203ENST00000426246 MYO9AB2RTY4 2548 aa10.92□□□□□ -0.66
USP42-203ENST00000426246 CUBNO60494 3623 aa10.91□□□□□ -0.66
USP42-203ENST00000426246 KBTBD11-OT1A0A1B0GTJ5 212 aa10.91□□□□□ -0.66
USP42-203ENST00000426246 CORTO00230 105 aa10.91□□□□□ -0.66
USP42-203ENST00000426246 GCGP01275 180 aa10.91□□□□□ -0.66
USP42-203ENST00000426246 CRYABP02511 175 aaKnown RBP10.91□□□□□ -0.66
USP42-203ENST00000426246 TAS2R60P59551 318 aa10.91□□□□□ -0.66
USP42-203ENST00000426246 C2CD3Q4AC94 2353 aa10.91□□□□□ -0.66
USP42-203ENST00000426246 IGKV1OR2-108A0A075B7D4 117 aa10.91□□□□□ -0.66
USP42-203ENST00000426246 PGPA6NDG6 321 aa10.91□□□□□ -0.66
USP42-203ENST00000426246 LYPD2Q6UXB3 125 aa10.91□□□□□ -0.66
USP42-203ENST00000426246 C15orf61A6NNL5 157 aa10.91□□□□□ -0.66
USP42-203ENST00000426246 DAZAP1Q96EP5 407 aaKnown RBP10.91□□□□□ -0.66
USP42-203ENST00000426246 NPIPB11E5RHQ5 1161 aa10.9□□□□□ -0.66
USP42-203ENST00000426246 GGCTO75223 188 aaKnown RBP10.9□□□□□ -0.66
USP42-203ENST00000426246 MZT1Q08AG7 82 aa10.9□□□□□ -0.66
USP42-203ENST00000426246 ZCCHC14Q8WYQ9 949 aaKnown RBP10.9□□□□□ -0.66
USP42-203ENST00000426246 NEU1Q99519 415 aa10.9□□□□□ -0.66
USP42-203ENST00000426246 AMMECR1Q9Y4X0 333 aaPredicted RBP10.9□□□□□ -0.66
USP42-203ENST00000426246 HILPDAQ9Y5L2 63 aa10.9□□□□□ -0.66
USP42-203ENST00000426246 TCF21O43680 179 aa10.9□□□□□ -0.66
USP42-203ENST00000426246 IGHV1-46P01743 117 aa10.9□□□□□ -0.66
USP42-203ENST00000426246 TAS2R45P59539 299 aa10.9□□□□□ -0.66
USP42-203ENST00000426246 PGLYRP4Q96LB8 373 aa10.9□□□□□ -0.66
USP42-203ENST00000426246 TMEM106BQ9NUM4 274 aa10.9□□□□□ -0.66
USP42-203ENST00000426246 CLEC5AQ9NY25 188 aa10.9□□□□□ -0.66
USP42-203ENST00000426246 IGHV3-23P01764 117 aa10.9□□□□□ -0.67
USP42-203ENST00000426246 WNT2P09544 360 aa10.9□□□□□ -0.67
USP42-203ENST00000426246 CCKARP32238 428 aa10.9□□□□□ -0.67
USP42-203ENST00000426246 RAB7AP51149 207 aa10.9□□□□□ -0.67
USP42-203ENST00000426246 RPL19P84098 196 aaKnown RBP10.9□□□□□ -0.67
USP42-203ENST00000426246 FAM57AQ8TBR7 257 aa10.9□□□□□ -0.67
USP42-203ENST00000426246 PAXXQ9BUH6 204 aa10.9□□□□□ -0.67
USP42-203ENST00000426246 IL36BQ9NZH7 164 aa10.9□□□□□ -0.67
USP42-203ENST00000426246 TEX50A0A1B0GTY4 177 aa10.89□□□□□ -0.67
USP42-203ENST00000426246 hADV38S2A0JD32 116 aa10.89□□□□□ -0.67
USP42-203ENST00000426246 FAM90A27PA6NNH2 459 aa10.89□□□□□ -0.67
USP42-203ENST00000426246 GGTLC3B5MD39 225 aa10.89□□□□□ -0.67
USP42-203ENST00000426246 VENTXO95231 258 aa10.89□□□□□ -0.67
USP42-203ENST00000426246 IGLV1-44P01699 117 aa10.89□□□□□ -0.67
USP42-203ENST00000426246 CEACAM8P31997 349 aaPredicted RBP10.89□□□□□ -0.67
USP42-203ENST00000426246 VDAC2P45880 294 aaPredicted RBP10.89□□□□□ -0.67
USP42-203ENST00000426246 LOXL3P58215 753 aa10.89□□□□□ -0.67
USP42-203ENST00000426246 FXYD7P58549 80 aa10.89□□□□□ -0.67
USP42-203ENST00000426246 SPATA45Q537H7 98 aa10.89□□□□□ -0.67
USP42-203ENST00000426246 C10orf113Q5VZT2 155 aa10.89□□□□□ -0.67
USP42-203ENST00000426246 NKX6-3A6NJ46 265 aa10.89□□□□□ -0.67
USP42-203ENST00000426246 J3QW42 95 aa10.89□□□□□ -0.67
USP42-203ENST00000426246 M0R2Z0 102 aa10.89□□□□□ -0.67
USP42-203ENST00000426246 RAB4AP20338 218 aa10.89□□□□□ -0.67
USP42-203ENST00000426246 CNTFRP26992 372 aa10.89□□□□□ -0.67
USP42-203ENST00000426246 MAS1LP35410 378 aa10.89□□□□□ -0.67
USP42-203ENST00000426246 C1orf185Q5T7R7 199 aa10.89□□□□□ -0.67
USP42-203ENST00000426246 IGHV3OR16-13A0A075B7E8 117 aa10.89□□□□□ -0.67
USP42-203ENST00000426246 IGHV3-74A0A0B4J1X5 117 aa10.89□□□□□ -0.67
USP42-203ENST00000426246 APCSP02743 223 aa10.89□□□□□ -0.67
USP42-203ENST00000426246 CT45A6P0DMU7 189 aa10.89□□□□□ -0.67
USP42-203ENST00000426246 CT45A5P0DMU8 189 aa10.89□□□□□ -0.67
USP42-203ENST00000426246 CT45A7P0DMV0 189 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms