RNA–Protein interactions for RNA: ENST00000426059.1

FN1-208, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 2,388 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-208ENST00000426059 SLC35E1Q96K37 410 aa13.73□□□□□ -0.21
FN1-208ENST00000426059 RASL11BQ9BPW5 248 aa13.73□□□□□ -0.21
FN1-208ENST00000426059 SLC39A9Q9NUM3 307 aa13.73□□□□□ -0.21
FN1-208ENST00000426059 MAP1LC3B2A6NCE7 125 aa13.73□□□□□ -0.21
FN1-208ENST00000426059 LINC01548A6NM66 108 aa13.73□□□□□ -0.21
FN1-208ENST00000426059 ADCYAP1P18509 176 aa13.73□□□□□ -0.21
FN1-208ENST00000426059 GPX4P36969 197 aaPredicted RBP13.73□□□□□ -0.21
FN1-208ENST00000426059 RND2P52198 227 aa13.73□□□□□ -0.21
FN1-208ENST00000426059 BCL6BQ8N143 479 aaPredicted RBP13.73□□□□□ -0.21
FN1-208ENST00000426059 CACNG8Q8WXS5 425 aa13.73□□□□□ -0.21
FN1-208ENST00000426059 MAP1LC3BQ9GZQ8 125 aa13.73□□□□□ -0.21
FN1-208ENST00000426059 TMPRSS5Q9H3S3 457 aa13.73□□□□□ -0.21
FN1-208ENST00000426059 C1RLQ9NZP8 487 aa13.73□□□□□ -0.21
FN1-208ENST00000426059 MXRA5Q9NR99 2828 aa13.72□□□□□ -0.21
FN1-208ENST00000426059 TMEM218A2RU14 115 aa13.72□□□□□ -0.21
FN1-208ENST00000426059 FNDC10F2Z333 226 aa13.72□□□□□ -0.21
FN1-208ENST00000426059 CD5P06127 495 aa13.72□□□□□ -0.21
FN1-208ENST00000426059 ACOT6Q3I5F7 207 aaPredicted RBP13.72□□□□□ -0.21
FN1-208ENST00000426059 RAB24Q969Q5 203 aa13.72□□□□□ -0.21
FN1-208ENST00000426059 MEGF9Q9H1U4 602 aa13.72□□□□□ -0.21
FN1-208ENST00000426059 GSX1Q9H4S2 264 aaPredicted RBP13.72□□□□□ -0.21
FN1-208ENST00000426059 KRBOX1C9JBD0 128 aa13.72□□□□□ -0.21
FN1-208ENST00000426059 MT-CO2P00403 227 aa13.72□□□□□ -0.21
FN1-208ENST00000426059 EGR2P11161 476 aaPredicted RBP13.72□□□□□ -0.21
FN1-208ENST00000426059 DEFA5Q01523 94 aa13.72□□□□□ -0.21
FN1-208ENST00000426059 MBD3L1Q8WWY6 194 aa13.72□□□□□ -0.21
FN1-208ENST00000426059 FLNAP21333 2647 aaKnown RBP13.71□□□□□ -0.21
FN1-208ENST00000426059 H3BUX3 64 aa13.71□□□□□ -0.21
FN1-208ENST00000426059 MBP02144 154 aa13.71□□□□□ -0.21
FN1-208ENST00000426059 APOC3P02656 99 aa13.71□□□□□ -0.21
FN1-208ENST00000426059 LINC00869P0C866 280 aa13.71□□□□□ -0.21
FN1-208ENST00000426059 ZNF90Q03938 601 aa13.71□□□□□ -0.21
FN1-208ENST00000426059 RAB31Q13636 194 aa13.71□□□□□ -0.21
FN1-208ENST00000426059 OR5T1Q8NG75 326 aa13.71□□□□□ -0.21
FN1-208ENST00000426059 GNG13Q9P2W3 67 aa13.71□□□□□ -0.21
FN1-208ENST00000426059 SLC45A2Q9UMX9 530 aa13.71□□□□□ -0.21
FN1-208ENST00000426059 S4R3C0 116 aa13.71□□□□□ -0.21
FN1-208ENST00000426059 ZFP92A6NM28 416 aa13.71□□□□□ -0.22
FN1-208ENST00000426059 PVRIGQ6DKI7 326 aa13.71□□□□□ -0.22
FN1-208ENST00000426059 SMAD7O15105 426 aaKnown RBP13.7□□□□□ -0.22
FN1-208ENST00000426059 RPL29P47914 159 aaKnown RBP13.7□□□□□ -0.22
FN1-208ENST00000426059 CDC34P49427 236 aaPredicted RBP13.7□□□□□ -0.22
FN1-208ENST00000426059 PPT1P50897 306 aa13.7□□□□□ -0.22
FN1-208ENST00000426059 PRR20EP86478 221 aa13.7□□□□□ -0.22
FN1-208ENST00000426059 PRR20CP86479 221 aa13.7□□□□□ -0.22
FN1-208ENST00000426059 PRR20DP86480 221 aa13.7□□□□□ -0.22
FN1-208ENST00000426059 PRR20BP86481 221 aa13.7□□□□□ -0.22
FN1-208ENST00000426059 PRR20AP86496 221 aa13.7□□□□□ -0.22
FN1-208ENST00000426059 C5orf56Q8N8D9 126 aa13.7□□□□□ -0.22
FN1-208ENST00000426059 ACTR3CQ9C0K3 210 aaPredicted RBP13.7□□□□□ -0.22
FN1-208ENST00000426059 SEPSECSQ9HD40 501 aaKnown RBP13.7□□□□□ -0.22
FN1-208ENST00000426059 IGKV1D-37A0A075B6S9 117 aa13.69□□□□□ -0.22
FN1-208ENST00000426059 CTXND1A0A1B0GTU2 59 aa13.69□□□□□ -0.22
FN1-208ENST00000426059 RBFOX3A6NFN3 312 aa13.69□□□□□ -0.22
FN1-208ENST00000426059 CYB5BO43169 146 aa13.69□□□□□ -0.22
FN1-208ENST00000426059 HLA-DRB1P01911 266 aa13.69□□□□□ -0.22
FN1-208ENST00000426059 HBE1P02100 147 aa13.69□□□□□ -0.22
FN1-208ENST00000426059 FBP1P09467 338 aa13.69□□□□□ -0.22
FN1-208ENST00000426059 SFTA3P0C7M3 94 aa13.69□□□□□ -0.22
FN1-208ENST00000426059 SPATA31B1PQ5VZV4 182 aa13.69□□□□□ -0.22
FN1-208ENST00000426059 PRSS57Q6UWY2 283 aa13.69□□□□□ -0.22
FN1-208ENST00000426059 COMMD1Q8N668 190 aa13.69□□□□□ -0.22
FN1-208ENST00000426059 TRAV1-1A0A0B4J248 108 aa13.69□□□□□ -0.22
FN1-208ENST00000426059 RBM14Q96PK6 669 aaKnown RBP13.69□□□□□ -0.22
FN1-208ENST00000426059 A0A1W2PPV4 95 aa13.68□□□□□ -0.22
FN1-208ENST00000426059 F8W036 122 aa13.68□□□□□ -0.22
FN1-208ENST00000426059 ATP6V0E1O15342 81 aa13.68□□□□□ -0.22
FN1-208ENST00000426059 AMY1AP04745 511 aa13.68□□□□□ -0.22
FN1-208ENST00000426059 CRYGCP07315 174 aa13.68□□□□□ -0.22
FN1-208ENST00000426059 ECSCRQ19T08 205 aa13.68□□□□□ -0.22
FN1-208ENST00000426059 GATAD1Q8WUU5 269 aa13.68□□□□□ -0.22
FN1-208ENST00000426059 I3L2K1 104 aa13.68□□□□□ -0.22
FN1-208ENST00000426059 RXFP4Q8TDU9 374 aa13.68□□□□□ -0.22
FN1-208ENST00000426059 SRSF8Q9BRL6 282 aaKnown RBP13.68□□□□□ -0.22
FN1-208ENST00000426059 PBDC1Q9BVG4 233 aa13.68□□□□□ -0.22
FN1-208ENST00000426059 BTBD17A6NE02 478 aa13.67□□□□□ -0.22
FN1-208ENST00000426059 PEA15Q15121 130 aa13.67□□□□□ -0.22
FN1-208ENST00000426059 DEFB112Q30KQ8 113 aa13.67□□□□□ -0.22
FN1-208ENST00000426059 CYP2G1PQ6ZSU1 146 aa13.67□□□□□ -0.22
FN1-208ENST00000426059 TMUB1Q9BVT8 246 aa13.67□□□□□ -0.22
FN1-208ENST00000426059 TNFRSF19Q9NS68 423 aa13.67□□□□□ -0.22
FN1-208ENST00000426059 DOK5Q9P104 306 aa13.67□□□□□ -0.22
FN1-208ENST00000426059 LINC00527Q9UJ94 153 aa13.67□□□□□ -0.22
FN1-208ENST00000426059 G3V318 75 aa13.67□□□□□ -0.22
FN1-208ENST00000426059 J3QLI3 93 aa13.67□□□□□ -0.22
FN1-208ENST00000426059 C9orf152Q5JTZ5 239 aa13.67□□□□□ -0.22
FN1-208ENST00000426059 ETFRF1Q6IPR1 90 aa13.67□□□□□ -0.22
FN1-208ENST00000426059 FANCD2OSQ96PS1 177 aa13.67□□□□□ -0.22
FN1-208ENST00000426059 MOB4Q9Y3A3 225 aa13.67□□□□□ -0.22
FN1-208ENST00000426059 K7EIM0 57 aa13.66□□□□□ -0.22
FN1-208ENST00000426059 CORTO00230 105 aa13.66□□□□□ -0.22
FN1-208ENST00000426059 CEBPGP53567 150 aa13.66□□□□□ -0.22
FN1-208ENST00000426059 ICAM4Q14773 271 aa13.66□□□□□ -0.22
FN1-208ENST00000426059 GUCA2BQ16661 112 aa13.66□□□□□ -0.22
FN1-208ENST00000426059 AKAP9Q99996 3911 aa13.66□□□□□ -0.22
FN1-208ENST00000426059 SEC14L6B5MCN3 397 aa13.66□□□□□ -0.22
FN1-208ENST00000426059 NUPL2O15504 423 aaKnown RBP13.66□□□□□ -0.22
FN1-208ENST00000426059 SOX15O60248 233 aa13.66□□□□□ -0.22
FN1-208ENST00000426059 FAM78BQ5VT40 261 aa13.66□□□□□ -0.22
FN1-208ENST00000426059 ATRAIDQ6UW56 229 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 140.8 ms