RNA–Protein interactions for RNA: ENST00000424846.3

TPM3P9-201, Transcript of tropomyosin 3 pseudogene 9, humanhuman

TSL 1 (best) BASIC

Gene TPM3P9, Length 2,920 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P9-201ENST00000424846 PATE2Q6UY27 113 aa11.5□□□□□ -0.57
TPM3P9-201ENST00000424846 SLC25A48Q6ZT89 311 aaKnown RBP11.5□□□□□ -0.57
TPM3P9-201ENST00000424846 DEFB123Q8N688 67 aa11.5□□□□□ -0.57
TPM3P9-201ENST00000424846 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.5□□□□□ -0.57
TPM3P9-201ENST00000424846 FAM222BQ8WU58 562 aa11.5□□□□□ -0.57
TPM3P9-201ENST00000424846 SSBP4Q9BWG4 385 aaPredicted RBP11.5□□□□□ -0.57
TPM3P9-201ENST00000424846 RPUSD1Q9UJJ7 312 aaKnown RBP11.5□□□□□ -0.57
TPM3P9-201ENST00000424846 CGB1A6NKQ9 187 aa11.49□□□□□ -0.57
TPM3P9-201ENST00000424846 VWC2LB2RUY7 222 aa11.49□□□□□ -0.57
TPM3P9-201ENST00000424846 C2orf83Q53S99 150 aa11.49□□□□□ -0.57
TPM3P9-201ENST00000424846 PRR27Q6MZM9 219 aa11.49□□□□□ -0.57
TPM3P9-201ENST00000424846 ZNF841Q6ZN19 808 aa11.49□□□□□ -0.57
TPM3P9-201ENST00000424846 C19orf35Q6ZS72 473 aa11.49□□□□□ -0.57
TPM3P9-201ENST00000424846 Q6ZVH6 145 aa11.49□□□□□ -0.57
TPM3P9-201ENST00000424846 RNF7Q9UBF6 113 aa11.49□□□□□ -0.57
TPM3P9-201ENST00000424846 GOLT1BQ9Y3E0 138 aa11.49□□□□□ -0.57
TPM3P9-201ENST00000424846 USF1P22415 310 aaPredicted RBP11.49□□□□□ -0.57
TPM3P9-201ENST00000424846 CD24P25063 80 aa11.49□□□□□ -0.57
TPM3P9-201ENST00000424846 GLRXP35754 106 aa11.49□□□□□ -0.57
TPM3P9-201ENST00000424846 TNFAIP6P98066 277 aaPredicted RBP11.49□□□□□ -0.57
TPM3P9-201ENST00000424846 CORO2AQ92828 525 aa11.49□□□□□ -0.57
TPM3P9-201ENST00000424846 RNF2Q99496 336 aa11.49□□□□□ -0.57
TPM3P9-201ENST00000424846 ZNF257Q9Y2Q1 563 aa11.49□□□□□ -0.57
TPM3P9-201ENST00000424846 M0QZK8 103 aa11.49□□□□□ -0.57
TPM3P9-201ENST00000424846 STPG4Q8N801 248 aa11.49□□□□□ -0.57
TPM3P9-201ENST00000424846 C18orf32Q8TCD1 76 aa11.49□□□□□ -0.57
TPM3P9-201ENST00000424846 SLC35E1Q96K37 410 aa11.49□□□□□ -0.57
TPM3P9-201ENST00000424846 TP73-AS1Q9UF72 201 aa11.49□□□□□ -0.57
TPM3P9-201ENST00000424846 IGLV3-9A0A075B6K5 115 aa11.48□□□□□ -0.57
TPM3P9-201ENST00000424846 TRAV17A0A0B4J275 112 aa11.48□□□□□ -0.57
TPM3P9-201ENST00000424846 A0A1W2PRE2 83 aa11.48□□□□□ -0.57
TPM3P9-201ENST00000424846 FNDC10F2Z333 226 aa11.48□□□□□ -0.57
TPM3P9-201ENST00000424846 APCSP02743 223 aa11.48□□□□□ -0.57
TPM3P9-201ENST00000424846 REG1AP05451 166 aa11.48□□□□□ -0.57
TPM3P9-201ENST00000424846 BTF3P20290 206 aaKnown RBP11.48□□□□□ -0.57
TPM3P9-201ENST00000424846 CCL8P80075 99 aa11.48□□□□□ -0.57
TPM3P9-201ENST00000424846 WT1-ASQ06250 92 aa11.48□□□□□ -0.57
TPM3P9-201ENST00000424846 DEFB109BQ30KR1 87 aa11.48□□□□□ -0.57
TPM3P9-201ENST00000424846 OR10J3Q5JRS4 329 aa11.48□□□□□ -0.57
TPM3P9-201ENST00000424846 WDR73Q6P4I2 378 aa11.48□□□□□ -0.57
TPM3P9-201ENST00000424846 ZNF788Q6ZQV5 615 aa11.48□□□□□ -0.57
TPM3P9-201ENST00000424846 SPACA3Q8IXA5 215 aa11.48□□□□□ -0.57
TPM3P9-201ENST00000424846 HARBI1Q96MB7 349 aa11.48□□□□□ -0.57
TPM3P9-201ENST00000424846 HYPMO75409 117 aa11.48□□□□□ -0.57
TPM3P9-201ENST00000424846 MT-ND6P03923 174 aa11.48□□□□□ -0.57
TPM3P9-201ENST00000424846 FAM27E3Q08E93 113 aa11.48□□□□□ -0.57
TPM3P9-201ENST00000424846 TNXAQ16473 311 aa11.48□□□□□ -0.57
TPM3P9-201ENST00000424846 NPIPB3Q92617 1050 aa11.48□□□□□ -0.57
TPM3P9-201ENST00000424846 ADTRPQ96IZ2 230 aa11.48□□□□□ -0.57
TPM3P9-201ENST00000424846 FAM215AQ9Y5M1 114 aa11.48□□□□□ -0.57
TPM3P9-201ENST00000424846 ARL2-SNX15V9GYD0 113 aa11.48□□□□□ -0.57
TPM3P9-201ENST00000424846 MFAP2P55001 183 aa11.47□□□□□ -0.57
TPM3P9-201ENST00000424846 RPL8P62917 257 aaKnown RBP11.47□□□□□ -0.57
TPM3P9-201ENST00000424846 RTL8BQ17RB0 113 aa11.47□□□□□ -0.57
TPM3P9-201ENST00000424846 IGFL2Q6UWQ7 119 aa11.47□□□□□ -0.57
TPM3P9-201ENST00000424846 KIR3DL3Q8N743 410 aa11.47□□□□□ -0.57
TPM3P9-201ENST00000424846 CLEC7AQ9BXN2 247 aa11.47□□□□□ -0.57
TPM3P9-201ENST00000424846 TPSG1Q9NRR2 321 aa11.47□□□□□ -0.57
TPM3P9-201ENST00000424846 NDUFA4L2Q9NRX3 87 aa11.47□□□□□ -0.57
TPM3P9-201ENST00000424846 PIEZO2Q9H5I5 2752 aa11.47□□□□□ -0.57
TPM3P9-201ENST00000424846 IGKV1D-37A0A075B6S9 117 aa11.47□□□□□ -0.57
TPM3P9-201ENST00000424846 SPAARA0A1B0GVQ0 90 aa11.47□□□□□ -0.57
TPM3P9-201ENST00000424846 IZUMO1RA6ND01 250 aa11.47□□□□□ -0.57
TPM3P9-201ENST00000424846 IGLC2P0DOY2 106 aa11.47□□□□□ -0.57
TPM3P9-201ENST00000424846 IGLC3P0DOY3 106 aa11.47□□□□□ -0.57
TPM3P9-201ENST00000424846 PRB4P10163 310 aaPredicted RBP11.47□□□□□ -0.57
TPM3P9-201ENST00000424846 TAS2R45P59539 299 aa11.47□□□□□ -0.57
TPM3P9-201ENST00000424846 NUP35Q8NFH5 326 aa11.47□□□□□ -0.57
TPM3P9-201ENST00000424846 NUDT10Q8NFP7 164 aa11.47□□□□□ -0.57
TPM3P9-201ENST00000424846 OR4B1Q8NGF8 309 aa11.47□□□□□ -0.57
TPM3P9-201ENST00000424846 OR1L8Q8NGR8 309 aa11.47□□□□□ -0.57
TPM3P9-201ENST00000424846 MBD6Q96DN6 1003 aa11.47□□□□□ -0.57
TPM3P9-201ENST00000424846 NUDT11Q96G61 164 aa11.47□□□□□ -0.57
TPM3P9-201ENST00000424846 RITA1Q96K30 269 aa11.47□□□□□ -0.57
TPM3P9-201ENST00000424846 DNAJC4Q9NNZ3 241 aa11.47□□□□□ -0.57
TPM3P9-201ENST00000424846 AMMECR1Q9Y4X0 333 aaPredicted RBP11.47□□□□□ -0.57
TPM3P9-201ENST00000424846 OTOGLQ3ZCN5 2332 aa11.47□□□□□ -0.57
TPM3P9-201ENST00000424846 POLEQ07864 2286 aa11.46□□□□□ -0.57
TPM3P9-201ENST00000424846 APELAP0DMC3 54 aa11.46□□□□□ -0.57
TPM3P9-201ENST00000424846 SPATA12Q7Z6I5 190 aa11.46□□□□□ -0.57
TPM3P9-201ENST00000424846 PNKDQ8N490 385 aa11.46□□□□□ -0.57
TPM3P9-201ENST00000424846 BET1LQ9NYM9 111 aa11.46□□□□□ -0.57
TPM3P9-201ENST00000424846 DPRXA6NFQ7 191 aa11.46□□□□□ -0.57
TPM3P9-201ENST00000424846 H3BTX0 84 aa11.46□□□□□ -0.57
TPM3P9-201ENST00000424846 NDUFB8O95169 186 aa11.46□□□□□ -0.57
TPM3P9-201ENST00000424846 FSTL3O95633 263 aa11.46□□□□□ -0.57
TPM3P9-201ENST00000424846 HLA-DQA1P01909 254 aa11.46□□□□□ -0.57
TPM3P9-201ENST00000424846 CAMPP49913 170 aa11.46□□□□□ -0.57
TPM3P9-201ENST00000424846 PRRX1P54821 245 aa11.46□□□□□ -0.57
TPM3P9-201ENST00000424846 Q71RC1 249 aaPredicted RBP11.46□□□□□ -0.57
TPM3P9-201ENST00000424846 ZNF329Q86UD4 541 aa11.46□□□□□ -0.57
TPM3P9-201ENST00000424846 MBD3L4A6NDZ8 208 aaPredicted RBP11.46□□□□□ -0.58
TPM3P9-201ENST00000424846 MBD3L3A6NE82 208 aaPredicted RBP11.46□□□□□ -0.58
TPM3P9-201ENST00000424846 MBD3L5A6NJ08 208 aaPredicted RBP11.46□□□□□ -0.58
TPM3P9-201ENST00000424846 SH2D7A6NKC9 451 aaPredicted RBP11.46□□□□□ -0.58
TPM3P9-201ENST00000424846 H0YJW9 148 aa11.46□□□□□ -0.58
TPM3P9-201ENST00000424846 M0QZ24 198 aa11.46□□□□□ -0.58
TPM3P9-201ENST00000424846 GATA4P43694 442 aa11.46□□□□□ -0.58
TPM3P9-201ENST00000424846 PRB3Q04118 309 aaPredicted RBP11.46□□□□□ -0.58
TPM3P9-201ENST00000424846 TIMM23BQ5SRD1 257 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms