RNA–Protein interactions for RNA: ENST00000423945.5

SBDSP1-202, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 3 BASIC

Gene SBDSP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-202ENST00000423945 ENY2Q9NPA8 101 aa13.31□□□□□ -0.28
SBDSP1-202ENST00000423945 SMPXQ9UHP9 88 aa13.31□□□□□ -0.28
SBDSP1-202ENST00000423945 A0A0B4J2A0 478 aa13.3□□□□□ -0.28
SBDSP1-202ENST00000423945 IGHV7-4-1A0A0J9YVY3 117 aa13.3□□□□□ -0.28
SBDSP1-202ENST00000423945 CHEK1O14757 476 aa13.3□□□□□ -0.28
SBDSP1-202ENST00000423945 NPBWR1P48145 328 aa13.3□□□□□ -0.28
SBDSP1-202ENST00000423945 SUB1P53999 127 aaKnown RBP eCLIP13.3□□□□□ -0.28
SBDSP1-202ENST00000423945 BAK1Q16611 211 aa13.3□□□□□ -0.28
SBDSP1-202ENST00000423945 TOMM20LQ6UXN7 152 aa13.3□□□□□ -0.28
SBDSP1-202ENST00000423945 SLC16A13Q7RTY0 426 aa13.3□□□□□ -0.28
SBDSP1-202ENST00000423945 DUSP18Q8NEJ0 188 aa13.3□□□□□ -0.28
SBDSP1-202ENST00000423945 SPAG8Q99932 426 aaPredicted RBP13.3□□□□□ -0.28
SBDSP1-202ENST00000423945 HIPK2Q9H2X6 1198 aa13.3□□□□□ -0.28
SBDSP1-202ENST00000423945 ZFAND3Q9H8U3 227 aa13.3□□□□□ -0.28
SBDSP1-202ENST00000423945 EDA2RQ9HAV5 297 aa13.3□□□□□ -0.28
SBDSP1-202ENST00000423945 SHPKQ9UHJ6 478 aa13.3□□□□□ -0.28
SBDSP1-202ENST00000423945 IGHV3-49A0A0A0MS15 119 aa13.29□□□□□ -0.28
SBDSP1-202ENST00000423945 CORTO00230 105 aa13.29□□□□□ -0.28
SBDSP1-202ENST00000423945 YIF1AO95070 293 aa13.29□□□□□ -0.28
SBDSP1-202ENST00000423945 SULT1A3P0DMM9 295 aa13.29□□□□□ -0.28
SBDSP1-202ENST00000423945 SULT1A4P0DMN0 295 aa13.29□□□□□ -0.28
SBDSP1-202ENST00000423945 C2orf83Q53S99 150 aa13.29□□□□□ -0.28
SBDSP1-202ENST00000423945 TMED4Q7Z7H5 227 aa13.29□□□□□ -0.28
SBDSP1-202ENST00000423945 DEDD2Q8WXF8 326 aa13.29□□□□□ -0.28
SBDSP1-202ENST00000423945 RNF2Q99496 336 aa13.29□□□□□ -0.28
SBDSP1-202ENST00000423945 RHPN1-AS1Q9BWJ2 59 aa13.29□□□□□ -0.28
SBDSP1-202ENST00000423945 HEYLQ9NQ87 328 aaPredicted RBP13.29□□□□□ -0.28
SBDSP1-202ENST00000423945 STARD9Q9P2P6 4700 aa13.29□□□□□ -0.28
SBDSP1-202ENST00000423945 CSMD3Q7Z407 3707 aa13.28□□□□□ -0.28
SBDSP1-202ENST00000423945 IGHV3OR16-13A0A075B7E8 117 aa13.28□□□□□ -0.28
SBDSP1-202ENST00000423945 IGHV3-74A0A0B4J1X5 117 aa13.28□□□□□ -0.28
SBDSP1-202ENST00000423945 A0A1B0GU03 582 aa13.28□□□□□ -0.28
SBDSP1-202ENST00000423945 CEBPZOSA8MTT3 80 aa13.28□□□□□ -0.28
SBDSP1-202ENST00000423945 CLN5O75503 358 aa13.28□□□□□ -0.28
SBDSP1-202ENST00000423945 OPRK1P41145 380 aa13.28□□□□□ -0.28
SBDSP1-202ENST00000423945 HTR2BP41595 481 aa13.28□□□□□ -0.28
SBDSP1-202ENST00000423945 ANKRD55Q3KP44 614 aa13.28□□□□□ -0.28
SBDSP1-202ENST00000423945 ODF3L2Q3SX64 289 aa13.28□□□□□ -0.28
SBDSP1-202ENST00000423945 SPANXN2Q5MJ10 180 aa13.28□□□□□ -0.28
SBDSP1-202ENST00000423945 TMEM116Q8NCL8 245 aa13.28□□□□□ -0.28
SBDSP1-202ENST00000423945 OR4X1Q8NH49 305 aa13.28□□□□□ -0.28
SBDSP1-202ENST00000423945 HSPB7Q9UBY9 170 aa13.28□□□□□ -0.28
SBDSP1-202ENST00000423945 UBQLN2Q9UHD9 624 aa13.28□□□□□ -0.28
SBDSP1-202ENST00000423945 PUS1Q9Y606 427 aaKnown RBP eCLIP13.28□□□□□ -0.28
SBDSP1-202ENST00000423945 APOHP02749 345 aaPredicted RBP13.27□□□□□ -0.29
SBDSP1-202ENST00000423945 CCR6P51684 374 aa13.27□□□□□ -0.29
SBDSP1-202ENST00000423945 TNFRSF9Q07011 255 aa13.27□□□□□ -0.29
SBDSP1-202ENST00000423945 SMCO1Q147U7 214 aa13.27□□□□□ -0.29
SBDSP1-202ENST00000423945 TMEM128Q5BJH2 165 aa13.27□□□□□ -0.29
SBDSP1-202ENST00000423945 FAM90A2PQ658T7 463 aa13.27□□□□□ -0.29
SBDSP1-202ENST00000423945 ZNF600Q6ZNG1 722 aa13.27□□□□□ -0.29
SBDSP1-202ENST00000423945 LGI3Q8N145 548 aa13.27□□□□□ -0.29
SBDSP1-202ENST00000423945 LILRB2Q8N423 598 aa13.27□□□□□ -0.29
SBDSP1-202ENST00000423945 SLC24A4Q8NFF2 622 aa13.27□□□□□ -0.29
SBDSP1-202ENST00000423945 MUC7Q8TAX7 377 aa13.27□□□□□ -0.29
SBDSP1-202ENST00000423945 SLC25A21Q9BQT8 299 aaPredicted RBP13.27□□□□□ -0.29
SBDSP1-202ENST00000423945 DYNC2H1Q8NCM8 4307 aaKnown RBP13.26□□□□□ -0.29
SBDSP1-202ENST00000423945 TRAV14DV4A0A0A6YYC5 116 aa13.26□□□□□ -0.29
SBDSP1-202ENST00000423945 C3orf84H3BNL1 204 aa13.26□□□□□ -0.29
SBDSP1-202ENST00000423945 IGKV1-17P01599 117 aa13.26□□□□□ -0.29
SBDSP1-202ENST00000423945 SRPXP78539 464 aa13.26□□□□□ -0.29
SBDSP1-202ENST00000423945 PPP1R1AQ13522 171 aa13.26□□□□□ -0.29
SBDSP1-202ENST00000423945 LAMTOR1Q6IAA8 161 aa13.26□□□□□ -0.29
SBDSP1-202ENST00000423945 FAM110AQ9BQ89 295 aa13.26□□□□□ -0.29
SBDSP1-202ENST00000423945 RBKSQ9H477 322 aa13.26□□□□□ -0.29
SBDSP1-202ENST00000423945 VSIRQ9H7M9 311 aa13.26□□□□□ -0.29
SBDSP1-202ENST00000423945 PITX3O75364 302 aa13.25□□□□□ -0.29
SBDSP1-202ENST00000423945 ANXA3P12429 323 aa13.25□□□□□ -0.29
SBDSP1-202ENST00000423945 TIGITQ495A1 244 aa13.25□□□□□ -0.29
SBDSP1-202ENST00000423945 PRSS54Q6PEW0 395 aa13.25□□□□□ -0.29
SBDSP1-202ENST00000423945 LRTM2Q8N967 370 aa13.25□□□□□ -0.29
SBDSP1-202ENST00000423945 RNASEH2CQ8TDP1 164 aaKnown RBP13.25□□□□□ -0.29
SBDSP1-202ENST00000423945 ST8SIA2Q92186 375 aa13.25□□□□□ -0.29
SBDSP1-202ENST00000423945 SFT2D2O95562 160 aa13.24□□□□□ -0.29
SBDSP1-202ENST00000423945 VAMP1P23763 118 aa13.24□□□□□ -0.29
SBDSP1-202ENST00000423945 NPY1RP25929 384 aa13.24□□□□□ -0.29
SBDSP1-202ENST00000423945 DUXBA0A1W2PPF3 345 aa13.23□□□□□ -0.29
SBDSP1-202ENST00000423945 IGLC1P0CG04 106 aa13.23□□□□□ -0.29
SBDSP1-202ENST00000423945 BTCP35070 178 aa13.23□□□□□ -0.29
SBDSP1-202ENST00000423945 RND2P52198 227 aa13.23□□□□□ -0.29
SBDSP1-202ENST00000423945 RBMS2Q15434 407 aaKnown RBP13.23□□□□□ -0.29
SBDSP1-202ENST00000423945 CASC10Q5T4H9 136 aa13.23□□□□□ -0.29
SBDSP1-202ENST00000423945 CENPSQ8N2Z9 138 aa13.23□□□□□ -0.29
SBDSP1-202ENST00000423945 DTD1Q8TEA8 209 aa13.23□□□□□ -0.29
SBDSP1-202ENST00000423945 GINS3Q9BRX5 216 aa13.23□□□□□ -0.29
SBDSP1-202ENST00000423945 GGTLC1Q9BX51 225 aa13.23□□□□□ -0.29
SBDSP1-202ENST00000423945 CACFD1Q9UGQ2 172 aa13.23□□□□□ -0.29
SBDSP1-202ENST00000423945 IGKV3-7A0A075B6H7 116 aa13.22□□□□□ -0.29
SBDSP1-202ENST00000423945 LOC102724200A0A096LPH7 203 aaPredicted RBP13.22□□□□□ -0.29
SBDSP1-202ENST00000423945 IGHV3-66A0A0C4DH42 116 aa13.22□□□□□ -0.29
SBDSP1-202ENST00000423945 RPS10-NUDT3A0A1W2PQS6 291 aa13.22□□□□□ -0.29
SBDSP1-202ENST00000423945 OR4C46A6NHA9 309 aa13.22□□□□□ -0.29
SBDSP1-202ENST00000423945 TCF24Q7RTU0 167 aa13.22□□□□□ -0.29
SBDSP1-202ENST00000423945 OR1S1Q8NH92 325 aa13.22□□□□□ -0.29
SBDSP1-202ENST00000423945 FLVCR2Q9UPI3 526 aa13.22□□□□□ -0.29
SBDSP1-202ENST00000423945 NAP1L6A6NFF2 107 aa13.21□□□□□ -0.29
SBDSP1-202ENST00000423945 NDUFB6O95139 128 aa13.21□□□□□ -0.29
SBDSP1-202ENST00000423945 SLC25A4P12235 298 aa13.21□□□□□ -0.29
SBDSP1-202ENST00000423945 TFPI2P48307 235 aa13.21□□□□□ -0.29
SBDSP1-202ENST00000423945 ZNF124Q15973 351 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 124.1 ms