RNA–Protein interactions for RNA: ENST00000422392.6

CDH1-202, Transcript of cadherin 1, humanhuman

TSL 1 (best) BASIC

Gene CDH1, Length 2,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-202ENST00000422392 PSMB11A5LHX3 300 aa12.79□□□□□ -0.36
CDH1-202ENST00000422392 TCAPO15273 167 aa12.79□□□□□ -0.36
CDH1-202ENST00000422392 TEX36Q5VZQ5 186 aa12.79□□□□□ -0.36
CDH1-202ENST00000422392 TMEM136Q6ZRR5 245 aa12.79□□□□□ -0.36
CDH1-202ENST00000422392 GNB1LQ9BYB4 327 aa12.79□□□□□ -0.36
CDH1-202ENST00000422392 SH3BGRL2Q9UJC5 107 aa12.79□□□□□ -0.36
CDH1-202ENST00000422392 CGB1A6NKQ9 187 aa12.78□□□□□ -0.36
CDH1-202ENST00000422392 APOA2P02652 100 aa12.78□□□□□ -0.36
CDH1-202ENST00000422392 ESDP10768 282 aa12.78□□□□□ -0.36
CDH1-202ENST00000422392 RANP62826 216 aaKnown RBP12.78□□□□□ -0.36
CDH1-202ENST00000422392 TMEM200BQ69YZ2 307 aa12.78□□□□□ -0.36
CDH1-202ENST00000422392 FBXL7Q9UJT9 491 aa12.78□□□□□ -0.36
CDH1-202ENST00000422392 DLL1O00548 723 aa12.78□□□□□ -0.36
CDH1-202ENST00000422392 APELAP0DMC3 54 aa12.78□□□□□ -0.36
CDH1-202ENST00000422392 PPOXP50336 477 aa12.78□□□□□ -0.36
CDH1-202ENST00000422392 PRR31Q5SQ13 230 aa12.78□□□□□ -0.36
CDH1-202ENST00000422392 RUSC1-AS1Q66K80 236 aa12.78□□□□□ -0.36
CDH1-202ENST00000422392 LYPD2Q6UXB3 125 aa12.78□□□□□ -0.36
CDH1-202ENST00000422392 RBMXL3Q8N7X1 1067 aaKnown RBP12.78□□□□□ -0.36
CDH1-202ENST00000422392 OSR1Q8TAX0 266 aaPredicted RBP12.78□□□□□ -0.36
CDH1-202ENST00000422392 NPIPB3Q92617 1050 aa12.78□□□□□ -0.36
CDH1-202ENST00000422392 FLYWCH2Q96CP2 140 aaKnown RBP12.78□□□□□ -0.36
CDH1-202ENST00000422392 ZNF714Q96N38 554 aa12.78□□□□□ -0.36
CDH1-202ENST00000422392 OSTCQ9NRP0 149 aa12.78□□□□□ -0.36
CDH1-202ENST00000422392 TPSG1Q9NRR2 321 aa12.78□□□□□ -0.36
CDH1-202ENST00000422392 ARL2-SNX15V9GYD0 113 aa12.78□□□□□ -0.36
CDH1-202ENST00000422392 A0A1W2PRE2 83 aa12.77□□□□□ -0.36
CDH1-202ENST00000422392 G0S2P27469 103 aa12.77□□□□□ -0.36
CDH1-202ENST00000422392 SRIP30626 198 aa12.77□□□□□ -0.36
CDH1-202ENST00000422392 COMPP49747 757 aaPredicted RBP12.77□□□□□ -0.36
CDH1-202ENST00000422392 ERHP84090 104 aaKnown RBP12.77□□□□□ -0.36
CDH1-202ENST00000422392 Q0VG73 95 aa12.77□□□□□ -0.36
CDH1-202ENST00000422392 Q6ZS92 163 aa12.77□□□□□ -0.36
CDH1-202ENST00000422392 CCL17Q92583 94 aa12.77□□□□□ -0.36
CDH1-202ENST00000422392 RITA1Q96K30 269 aa12.77□□□□□ -0.36
CDH1-202ENST00000422392 SGK494Q96LW2 274 aa12.77□□□□□ -0.36
CDH1-202ENST00000422392 GAL3ST2Q9H3Q3 398 aa12.77□□□□□ -0.36
CDH1-202ENST00000422392 DNAJC4Q9NNZ3 241 aa12.77□□□□□ -0.36
CDH1-202ENST00000422392 ZNF355PQ9NSJ1 428 aa12.77□□□□□ -0.36
CDH1-202ENST00000422392 MALRD1Q5VYJ5 2156 aa12.77□□□□□ -0.36
CDH1-202ENST00000422392 NKX6-3A6NJ46 265 aa12.77□□□□□ -0.37
CDH1-202ENST00000422392 PMCHP20382 165 aa12.77□□□□□ -0.37
CDH1-202ENST00000422392 DLX1P56177 255 aa12.77□□□□□ -0.37
CDH1-202ENST00000422392 KRTDAPP60985 99 aa12.77□□□□□ -0.37
CDH1-202ENST00000422392 C3orf36Q3SXR2 165 aa12.77□□□□□ -0.37
CDH1-202ENST00000422392 PATE2Q6UY27 113 aa12.77□□□□□ -0.37
CDH1-202ENST00000422392 TEX43Q6ZNM6 134 aa12.77□□□□□ -0.37
CDH1-202ENST00000422392 OR10X1Q8NGY0 326 aa12.77□□□□□ -0.37
CDH1-202ENST00000422392 ZNF318Q5VUA4 2279 aa12.77□□□□□ -0.37
CDH1-202ENST00000422392 M0R143 59 aa12.76□□□□□ -0.37
CDH1-202ENST00000422392 ISLRO14498 428 aa12.76□□□□□ -0.37
CDH1-202ENST00000422392 CEACAM8P31997 349 aaPredicted RBP12.76□□□□□ -0.37
CDH1-202ENST00000422392 PRB3Q04118 309 aaPredicted RBP12.76□□□□□ -0.37
CDH1-202ENST00000422392 ADIPOQQ15848 244 aa12.76□□□□□ -0.37
CDH1-202ENST00000422392 C19orf35Q6ZS72 473 aa12.76□□□□□ -0.37
CDH1-202ENST00000422392 SIGLECL1Q8N7X8 197 aa12.76□□□□□ -0.37
CDH1-202ENST00000422392 TBL2Q9Y4P3 447 aaKnown RBP12.76□□□□□ -0.37
CDH1-202ENST00000422392 IGHV3-72A0A0B4J1Y9 119 aa12.76□□□□□ -0.37
CDH1-202ENST00000422392 DPRXA6NFQ7 191 aa12.76□□□□□ -0.37
CDH1-202ENST00000422392 COX7A2P2O60397 106 aa12.76□□□□□ -0.37
CDH1-202ENST00000422392 RAB4AP20338 218 aa12.76□□□□□ -0.37
CDH1-202ENST00000422392 IGFL3Q6UXB1 125 aa12.76□□□□□ -0.37
CDH1-202ENST00000422392 OR5AN1Q8NGI8 311 aa12.76□□□□□ -0.37
CDH1-202ENST00000422392 ZNF430Q9H8G1 570 aaPredicted RBP12.76□□□□□ -0.37
CDH1-202ENST00000422392 SVEP1Q4LDE5 3571 aa12.76□□□□□ -0.37
CDH1-202ENST00000422392 C17orf100A8MU93 164 aa12.76□□□□□ -0.37
CDH1-202ENST00000422392 BMPR1BO00238 502 aa12.76□□□□□ -0.37
CDH1-202ENST00000422392 GPX1P07203 203 aa12.76□□□□□ -0.37
CDH1-202ENST00000422392 AMTP48728 403 aa12.76□□□□□ -0.37
CDH1-202ENST00000422392 GNG5P63218 68 aa12.76□□□□□ -0.37
CDH1-202ENST00000422392 PRR27Q6MZM9 219 aa12.76□□□□□ -0.37
CDH1-202ENST00000422392 NEU1Q99519 415 aa12.76□□□□□ -0.37
CDH1-202ENST00000422392 CDC42EP3Q9UKI2 254 aa12.76□□□□□ -0.37
CDH1-202ENST00000422392 TRBV9A0A0B4J1U6 114 aa12.75□□□□□ -0.37
CDH1-202ENST00000422392 SMIM27A0A1W2PRY6 76 aa12.75□□□□□ -0.37
CDH1-202ENST00000422392 SLC25A17O43808 307 aa12.75□□□□□ -0.37
CDH1-202ENST00000422392 ZNF253O75346 499 aa12.75□□□□□ -0.37
CDH1-202ENST00000422392 TNFRSF1AP19438 455 aa12.75□□□□□ -0.37
CDH1-202ENST00000422392 TDGF1P3P51864 188 aa12.75□□□□□ -0.37
CDH1-202ENST00000422392 BSPH1Q075Z2 132 aa12.75□□□□□ -0.37
CDH1-202ENST00000422392 TMEM177Q53S58 311 aa12.75□□□□□ -0.37
CDH1-202ENST00000422392 TMEM108Q6UXF1 575 aa12.75□□□□□ -0.37
CDH1-202ENST00000422392 FAM19A2Q8N3H0 131 aa12.75□□□□□ -0.37
CDH1-202ENST00000422392 PNKDQ8N490 385 aa12.75□□□□□ -0.37
CDH1-202ENST00000422392 C19orf24Q9BVV8 132 aa12.75□□□□□ -0.37
CDH1-202ENST00000422392 AMMECR1Q9Y4X0 333 aaPredicted RBP12.75□□□□□ -0.37
CDH1-202ENST00000422392 IGKV1D-37A0A075B6S9 117 aa12.75□□□□□ -0.37
CDH1-202ENST00000422392 MOSP00540 346 aa12.75□□□□□ -0.37
CDH1-202ENST00000422392 BRS3P32247 399 aa12.75□□□□□ -0.37
CDH1-202ENST00000422392 SLAQ13239 276 aa12.75□□□□□ -0.37
CDH1-202ENST00000422392 C10orf113Q5VZT2 155 aa12.75□□□□□ -0.37
CDH1-202ENST00000422392 OR4C13Q8NGP0 309 aa12.75□□□□□ -0.37
CDH1-202ENST00000422392 PAXXQ9BUH6 204 aa12.75□□□□□ -0.37
CDH1-202ENST00000422392 VAMP8Q9BV40 100 aa12.75□□□□□ -0.37
CDH1-202ENST00000422392 SAP30LQ9HAJ7 183 aa12.75□□□□□ -0.37
CDH1-202ENST00000422392 IGHV3-21A0A0B4J1V1 117 aa12.74□□□□□ -0.37
CDH1-202ENST00000422392 A0A0G2JNJ9 132 aa12.74□□□□□ -0.37
CDH1-202ENST00000422392 A0A1W2PS18 150 aa12.74□□□□□ -0.37
CDH1-202ENST00000422392 AMY1AP04745 511 aa12.74□□□□□ -0.37
CDH1-202ENST00000422392 USF1P22415 310 aaPredicted RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms