RNA–Protein interactions for RNA: ENST00000417656.6

SKA1-203, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2 BASIC

Gene SKA1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-203ENST00000417656 OR4D5Q8NGN0 318 aa9.51□□□□□ -0.89
SKA1-203ENST00000417656 OR10C1Q96KK4 312 aa9.51□□□□□ -0.89
SKA1-203ENST00000417656 OR4C12Q96R67 309 aa9.51□□□□□ -0.89
SKA1-203ENST00000417656 ATP6V0BQ99437 205 aa9.51□□□□□ -0.89
SKA1-203ENST00000417656 AURKAIP1Q9NWT8 199 aaPredicted RBP9.51□□□□□ -0.89
SKA1-203ENST00000417656 MRPL36Q9P0J6 103 aaKnown RBP9.51□□□□□ -0.89
SKA1-203ENST00000417656 FAM25EA8MYX2 175 aa9.5□□□□□ -0.89
SKA1-203ENST00000417656 INMT-MINDY4F8WBC2 141 aa9.5□□□□□ -0.89
SKA1-203ENST00000417656 LGALS9O00182 355 aa9.5□□□□□ -0.89
SKA1-203ENST00000417656 SYNGR2O43760 224 aa9.5□□□□□ -0.89
SKA1-203ENST00000417656 GNG7O60262 68 aa9.5□□□□□ -0.89
SKA1-203ENST00000417656 MED6O75586 246 aa9.5□□□□□ -0.89
SKA1-203ENST00000417656 SCGB1D2O95969 90 aa9.5□□□□□ -0.89
SKA1-203ENST00000417656 CSN3P07498 182 aa9.5□□□□□ -0.89
SKA1-203ENST00000417656 FCGR2BP31994 310 aaPredicted RBP9.5□□□□□ -0.89
SKA1-203ENST00000417656 NKX2-1P43699 371 aaPredicted RBP9.5□□□□□ -0.89
SKA1-203ENST00000417656 INSL3P51460 131 aa9.5□□□□□ -0.89
SKA1-203ENST00000417656 MLANAQ16655 118 aa9.5□□□□□ -0.89
SKA1-203ENST00000417656 SPSB3Q6PJ21 355 aa9.5□□□□□ -0.89
SKA1-203ENST00000417656 UNQ9165/PRO28630Q6UXU0 137 aa9.5□□□□□ -0.89
SKA1-203ENST00000417656 GPHB5Q86YW7 130 aa9.5□□□□□ -0.89
SKA1-203ENST00000417656 ZBTB8BQ8NAP8 495 aaPredicted RBP9.5□□□□□ -0.89
SKA1-203ENST00000417656 CACNG8Q8WXS5 425 aa9.5□□□□□ -0.89
SKA1-203ENST00000417656 ZNF414Q96IQ9 312 aa9.5□□□□□ -0.89
SKA1-203ENST00000417656 PEMTQ9UBM1 199 aa9.5□□□□□ -0.89
SKA1-203ENST00000417656 RPS10-NUDT3A0A1W2PQS6 291 aa9.49□□□□□ -0.89
SKA1-203ENST00000417656 ZNF320A2RRD8 509 aa9.49□□□□□ -0.89
SKA1-203ENST00000417656 TMEM213A2RRL7 107 aa9.49□□□□□ -0.89
SKA1-203ENST00000417656 C2orf70A6NJV1 201 aa9.49□□□□□ -0.89
SKA1-203ENST00000417656 C15orf62A8K5M9 175 aa9.49□□□□□ -0.89
SKA1-203ENST00000417656 A8MWP6 167 aa9.49□□□□□ -0.89
SKA1-203ENST00000417656 H3BP45 60 aa9.49□□□□□ -0.89
SKA1-203ENST00000417656 WRBO00258 174 aa9.49□□□□□ -0.89
SKA1-203ENST00000417656 NUPL2O15504 423 aaKnown RBP9.49□□□□□ -0.89
SKA1-203ENST00000417656 SSSCA1O60232 199 aa9.49□□□□□ -0.89
SKA1-203ENST00000417656 CTSGP08311 255 aa9.49□□□□□ -0.89
SKA1-203ENST00000417656 POLR2GP62487 172 aaKnown RBP eCLIP9.49□□□□□ -0.89
SKA1-203ENST00000417656 FAM106AQ4KMX7 169 aa9.49□□□□□ -0.89
SKA1-203ENST00000417656 ADAMTSL5Q6ZMM2 481 aa9.49□□□□□ -0.89
SKA1-203ENST00000417656 RNASEH2CQ8TDP1 164 aaKnown RBP9.49□□□□□ -0.89
SKA1-203ENST00000417656 TMEM190Q8WZ59 177 aa9.49□□□□□ -0.89
SKA1-203ENST00000417656 TXN2Q99757 166 aa9.49□□□□□ -0.89
SKA1-203ENST00000417656 MARVELD1Q9BSK0 173 aa9.49□□□□□ -0.89
SKA1-203ENST00000417656 ZNF436Q9C0F3 470 aaPredicted RBP9.49□□□□□ -0.89
SKA1-203ENST00000417656 GPN1Q9HCN4 374 aaPredicted RBP9.49□□□□□ -0.89
SKA1-203ENST00000417656 GAR1Q9NY12 217 aaKnown RBP9.49□□□□□ -0.89
SKA1-203ENST00000417656 PAIP2BQ9ULR5 123 aaKnown RBP9.49□□□□□ -0.89
SKA1-203ENST00000417656 U3KQ87 197 aa9.49□□□□□ -0.89
SKA1-203ENST00000417656 DNAH3Q8TD57 4116 aa9.49□□□□□ -0.89
SKA1-203ENST00000417656 IGHV3OR16-8A0A075B7F1 116 aa9.48□□□□□ -0.89
SKA1-203ENST00000417656 C5orf51A6NDU8 294 aa9.48□□□□□ -0.89
SKA1-203ENST00000417656 PRAF2O60831 178 aa9.48□□□□□ -0.89
SKA1-203ENST00000417656 IGLV1-51P01701 117 aa9.48□□□□□ -0.89
SKA1-203ENST00000417656 IFNA4P05014 189 aa9.48□□□□□ -0.89
SKA1-203ENST00000417656 NPBWR1P48145 328 aa9.48□□□□□ -0.89
SKA1-203ENST00000417656 RND2P52198 227 aa9.48□□□□□ -0.89
SKA1-203ENST00000417656 ID3Q02535 119 aa9.48□□□□□ -0.89
SKA1-203ENST00000417656 SLC16A13Q7RTY0 426 aa9.48□□□□□ -0.89
SKA1-203ENST00000417656 NOXA1Q86UR1 476 aa9.48□□□□□ -0.89
SKA1-203ENST00000417656 CIB3Q96Q77 187 aaPredicted RBP9.48□□□□□ -0.89
SKA1-203ENST00000417656 PRR25Q96S07 402 aa9.48□□□□□ -0.89
SKA1-203ENST00000417656 GSKIPQ9P0R6 139 aa9.48□□□□□ -0.89
SKA1-203ENST00000417656 RCL1Q9Y2P8 373 aaKnown RBP9.48□□□□□ -0.89
SKA1-203ENST00000417656 WI2-2373I1.2A0A1W2PRP0 233 aa9.47□□□□□ -0.89
SKA1-203ENST00000417656 NDUFA4O00483 81 aa9.47□□□□□ -0.89
SKA1-203ENST00000417656 CLN5O75503 358 aa9.47□□□□□ -0.89
SKA1-203ENST00000417656 LY86O95711 162 aa9.47□□□□□ -0.89
SKA1-203ENST00000417656 PTTG1O95997 202 aa9.47□□□□□ -0.89
SKA1-203ENST00000417656 SLC25A4P12235 298 aa9.47□□□□□ -0.89
SKA1-203ENST00000417656 FOLR2P14207 255 aa9.47□□□□□ -0.89
SKA1-203ENST00000417656 RELQ04864 619 aaPredicted RBP9.47□□□□□ -0.89
SKA1-203ENST00000417656 CD69Q07108 199 aa9.47□□□□□ -0.89
SKA1-203ENST00000417656 TM4SF20Q53R12 229 aa9.47□□□□□ -0.89
SKA1-203ENST00000417656 SPANXN5Q5MJ07 72 aa9.47□□□□□ -0.89
SKA1-203ENST00000417656 PRSS54Q6PEW0 395 aa9.47□□□□□ -0.89
SKA1-203ENST00000417656 OR4X1Q8NH49 305 aa9.47□□□□□ -0.89
SKA1-203ENST00000417656 DYNLRB2Q8TF09 96 aa9.47□□□□□ -0.89
SKA1-203ENST00000417656 C20orf24Q9BUV8 137 aa9.47□□□□□ -0.89
SKA1-203ENST00000417656 PALMDQ9NP74 551 aa9.47□□□□□ -0.89
SKA1-203ENST00000417656 SIGLEC8Q9NYZ4 499 aa9.47□□□□□ -0.89
SKA1-203ENST00000417656 ZNF256Q9Y2P7 627 aaPredicted RBP9.47□□□□□ -0.89
SKA1-203ENST00000417656 SELENOKQ9Y6D0 94 aa9.47□□□□□ -0.89
SKA1-203ENST00000417656 SNRPGP15A8MWD9 76 aa9.46□□□□□ -0.9
SKA1-203ENST00000417656 K7EIL1 84 aa9.46□□□□□ -0.9
SKA1-203ENST00000417656 GOSR2O14653 212 aa9.46□□□□□ -0.9
SKA1-203ENST00000417656 ZNF207O43670 478 aaKnown RBP9.46□□□□□ -0.9
SKA1-203ENST00000417656 TMEM50AO95807 157 aa9.46□□□□□ -0.9
SKA1-203ENST00000417656 MBPP02686 304 aaPredicted RBP9.46□□□□□ -0.9
SKA1-203ENST00000417656 ATP5IP56385 69 aaPredicted RBP9.46□□□□□ -0.9
SKA1-203ENST00000417656 ETFRF1Q6IPR1 90 aa9.46□□□□□ -0.9
SKA1-203ENST00000417656 GSG1LQ6UXU4 331 aa9.46□□□□□ -0.9
SKA1-203ENST00000417656 ACY3Q96HD9 319 aa9.46□□□□□ -0.9
SKA1-203ENST00000417656 ZMAT5Q9UDW3 170 aaKnown RBP9.46□□□□□ -0.9
SKA1-203ENST00000417656 UFC1Q9Y3C8 167 aa9.46□□□□□ -0.9
SKA1-203ENST00000417656 IZUMO1RA6ND01 250 aa9.45□□□□□ -0.9
SKA1-203ENST00000417656 YIF1AO95070 293 aa9.45□□□□□ -0.9
SKA1-203ENST00000417656 IGLC1P0CG04 106 aa9.45□□□□□ -0.9
SKA1-203ENST00000417656 CBLN1P23435 193 aa9.45□□□□□ -0.9
SKA1-203ENST00000417656 RAB11AP62491 216 aa9.45□□□□□ -0.9
SKA1-203ENST00000417656 RPP30P78346 268 aaKnown RBP9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms