RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 RNF152Q8N8N0 203 aa6.59□□□□□ -1.36
TRIM48-201ENST00000417545 OR4F17Q8NGA8 305 aa6.59□□□□□ -1.36
TRIM48-201ENST00000417545 VN1R17PQ8TDU5 208 aa6.59□□□□□ -1.36
TRIM48-201ENST00000417545 C4orf3Q8WVX3 66 aa6.59□□□□□ -1.36
TRIM48-201ENST00000417545 WDR89Q96FK6 387 aaPredicted RBP6.59□□□□□ -1.36
TRIM48-201ENST00000417545 FANCD2OSQ96PS1 177 aa6.59□□□□□ -1.36
TRIM48-201ENST00000417545 OR4F4Q96R69 305 aa6.59□□□□□ -1.36
TRIM48-201ENST00000417545 RANGRFQ9HD47 186 aaPredicted RBP6.59□□□□□ -1.36
TRIM48-201ENST00000417545 JMJD1CQ15652 2540 aa6.58□□□□□ -1.36
TRIM48-201ENST00000417545 A0A1B0GVG6 124 aa6.58□□□□□ -1.36
TRIM48-201ENST00000417545 NUPL2O15504 423 aaKnown RBP6.58□□□□□ -1.36
TRIM48-201ENST00000417545 CST7O76096 145 aa6.58□□□□□ -1.36
TRIM48-201ENST00000417545 FABP1P07148 127 aa6.58□□□□□ -1.36
TRIM48-201ENST00000417545 RPL12P30050 165 aaKnown RBP6.58□□□□□ -1.36
TRIM48-201ENST00000417545 SULT1A1P50225 295 aa6.58□□□□□ -1.36
TRIM48-201ENST00000417545 RND2P52198 227 aa6.58□□□□□ -1.36
TRIM48-201ENST00000417545 MFAP2P55001 183 aa6.58□□□□□ -1.36
TRIM48-201ENST00000417545 CD69Q07108 199 aa6.58□□□□□ -1.36
TRIM48-201ENST00000417545 SLC38A11Q08AI6 406 aa6.58□□□□□ -1.36
TRIM48-201ENST00000417545 IL15RAQ13261 267 aa6.58□□□□□ -1.36
TRIM48-201ENST00000417545 RPEL1Q2QD12 228 aa6.58□□□□□ -1.36
TRIM48-201ENST00000417545 BSXQ3C1V8 233 aa6.58□□□□□ -1.36
TRIM48-201ENST00000417545 C8orf86Q6ZUL3 223 aa6.58□□□□□ -1.36
TRIM48-201ENST00000417545 ZNF546Q86UE3 836 aa6.58□□□□□ -1.36
TRIM48-201ENST00000417545 OR1S2Q8NGQ3 325 aa6.58□□□□□ -1.36
TRIM48-201ENST00000417545 SCARB1Q8WTV0 552 aa6.58□□□□□ -1.36
TRIM48-201ENST00000417545 CITED1Q99966 193 aa6.58□□□□□ -1.36
TRIM48-201ENST00000417545 PEF1Q9UBV8 284 aaKnown RBP6.58□□□□□ -1.36
TRIM48-201ENST00000417545 C2CD3Q4AC94 2353 aa6.58□□□□□ -1.36
TRIM48-201ENST00000417545 TRAV30A0A087WSZ9 112 aa6.57□□□□□ -1.36
TRIM48-201ENST00000417545 IGSF23A1L1A6 192 aa6.57□□□□□ -1.36
TRIM48-201ENST00000417545 OR2T8A6NH00 312 aa6.57□□□□□ -1.36
TRIM48-201ENST00000417545 ZFP92A6NM28 416 aa6.57□□□□□ -1.36
TRIM48-201ENST00000417545 LINC01619G3V211 115 aa6.57□□□□□ -1.36
TRIM48-201ENST00000417545 I3L2K1 104 aa6.57□□□□□ -1.36
TRIM48-201ENST00000417545 K7EIM0 57 aa6.57□□□□□ -1.36
TRIM48-201ENST00000417545 PFDN1O60925 122 aa6.57□□□□□ -1.36
TRIM48-201ENST00000417545 S100A11P31949 105 aa6.57□□□□□ -1.36
TRIM48-201ENST00000417545 GPX4P36969 197 aaPredicted RBP6.57□□□□□ -1.36
TRIM48-201ENST00000417545 AP2S1P53680 142 aaPredicted RBP6.57□□□□□ -1.36
TRIM48-201ENST00000417545 PAX9P55771 341 aa6.57□□□□□ -1.36
TRIM48-201ENST00000417545 KRTAP10-3P60369 221 aa6.57□□□□□ -1.36
TRIM48-201ENST00000417545 EWSR1Q01844 656 aaKnown RBP eCLIP6.57□□□□□ -1.36
TRIM48-201ENST00000417545 RELQ04864 619 aaPredicted RBP6.57□□□□□ -1.36
TRIM48-201ENST00000417545 BAXQ07812 192 aa6.57□□□□□ -1.36
TRIM48-201ENST00000417545 ZNF616Q08AN1 781 aa6.57□□□□□ -1.36
TRIM48-201ENST00000417545 DEFB136Q30KP8 78 aa6.57□□□□□ -1.36
TRIM48-201ENST00000417545 TCTEX1D4Q5JR98 221 aa6.57□□□□□ -1.36
TRIM48-201ENST00000417545 ZNF343Q6P1L6 599 aa6.57□□□□□ -1.36
TRIM48-201ENST00000417545 TMEM14EPQ6UXP3 125 aa6.57□□□□□ -1.36
TRIM48-201ENST00000417545 ACOT7LQ6ZUV0 252 aa6.57□□□□□ -1.36
TRIM48-201ENST00000417545 TMEM252Q8N6L7 170 aa6.57□□□□□ -1.36
TRIM48-201ENST00000417545 OR1N2Q8NGR9 330 aa6.57□□□□□ -1.36
TRIM48-201ENST00000417545 WIPF2Q8TF74 440 aaPredicted RBP6.57□□□□□ -1.36
TRIM48-201ENST00000417545 CHAC2Q8WUX2 184 aa6.57□□□□□ -1.36
TRIM48-201ENST00000417545 MDFIQ99750 246 aa6.57□□□□□ -1.36
TRIM48-201ENST00000417545 TXN2Q99757 166 aa6.57□□□□□ -1.36
TRIM48-201ENST00000417545 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.56□□□□□ -1.36
TRIM48-201ENST00000417545 TRAV14DV4A0A0A6YYC5 116 aa6.56□□□□□ -1.36
TRIM48-201ENST00000417545 PPP5D1E7EU14 171 aa6.56□□□□□ -1.36
TRIM48-201ENST00000417545 H0YIZ8 118 aa6.56□□□□□ -1.36
TRIM48-201ENST00000417545 SMLR1H3BR10 107 aa6.56□□□□□ -1.36
TRIM48-201ENST00000417545 J3QL48 77 aa6.56□□□□□ -1.36
TRIM48-201ENST00000417545 ARPC5O15511 151 aa6.56□□□□□ -1.36
TRIM48-201ENST00000417545 TGOLN2O43493 480 aa6.56□□□□□ -1.36
TRIM48-201ENST00000417545 GGCTO75223 188 aaKnown RBP6.56□□□□□ -1.36
TRIM48-201ENST00000417545 TMEM50AO95807 157 aa6.56□□□□□ -1.36
TRIM48-201ENST00000417545 IFNA5P01569 189 aa6.56□□□□□ -1.36
TRIM48-201ENST00000417545 HSPB1P04792 205 aaKnown RBP6.56□□□□□ -1.36
TRIM48-201ENST00000417545 CLEC3BP05452 202 aa6.56□□□□□ -1.36
TRIM48-201ENST00000417545 ZP3P21754 424 aa6.56□□□□□ -1.36
TRIM48-201ENST00000417545 DLK1P80370 383 aa6.56□□□□□ -1.36
TRIM48-201ENST00000417545 RAB31Q13636 194 aa6.56□□□□□ -1.36
TRIM48-201ENST00000417545 CLINT1Q14677 625 aa6.56□□□□□ -1.36
TRIM48-201ENST00000417545 ATP6V1FQ16864 119 aa6.56□□□□□ -1.36
TRIM48-201ENST00000417545 SPSB3Q6PJ21 355 aa6.56□□□□□ -1.36
TRIM48-201ENST00000417545 C18orf65Q6ZTR6 163 aa6.56□□□□□ -1.36
TRIM48-201ENST00000417545 OR11H1Q8NG94 326 aa6.56□□□□□ -1.36
TRIM48-201ENST00000417545 OR5C1Q8NGR4 320 aa6.56□□□□□ -1.36
TRIM48-201ENST00000417545 ZNF502Q8TBZ5 544 aa6.56□□□□□ -1.36
TRIM48-201ENST00000417545 MYOZ3Q8TDC0 251 aa6.56□□□□□ -1.36
TRIM48-201ENST00000417545 CACNG8Q8WXS5 425 aa6.56□□□□□ -1.36
TRIM48-201ENST00000417545 NPIPB3Q92617 1050 aa6.56□□□□□ -1.36
TRIM48-201ENST00000417545 BSCL2Q96G97 398 aaPredicted RBP6.56□□□□□ -1.36
TRIM48-201ENST00000417545 DUX3Q96PT4 197 aa6.56□□□□□ -1.36
TRIM48-201ENST00000417545 TMEM147Q9BVK8 224 aa6.56□□□□□ -1.36
TRIM48-201ENST00000417545 SMIM3Q9BZL3 60 aa6.56□□□□□ -1.36
TRIM48-201ENST00000417545 UQCC1Q9NVA1 299 aa6.56□□□□□ -1.36
TRIM48-201ENST00000417545 HSPB11Q9Y547 144 aa6.56□□□□□ -1.36
TRIM48-201ENST00000417545 DMRT1Q9Y5R6 373 aa6.56□□□□□ -1.36
TRIM48-201ENST00000417545 IGHV4OR15-8A0A075B7B6 117 aa6.55□□□□□ -1.36
TRIM48-201ENST00000417545 A0A087WW49 117 aa6.55□□□□□ -1.36
TRIM48-201ENST00000417545 UBE2L5PA0A1B0GUS4 154 aa6.55□□□□□ -1.36
TRIM48-201ENST00000417545 I3L521 148 aa6.55□□□□□ -1.36
TRIM48-201ENST00000417545 CCL24O00175 119 aa6.55□□□□□ -1.36
TRIM48-201ENST00000417545 CLN5O75503 358 aa6.55□□□□□ -1.36
TRIM48-201ENST00000417545 DFFBO76075 338 aa6.55□□□□□ -1.36
TRIM48-201ENST00000417545 YIF1AO95070 293 aa6.55□□□□□ -1.36
TRIM48-201ENST00000417545 OR10J1P30954 320 aa6.55□□□□□ -1.36
TRIM48-201ENST00000417545 MYCNOSP40205 109 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms