RNA–Protein interactions for RNA: ENST00000417508.1

VPS16-204, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 819 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-204ENST00000417508 A0A0J9YWU9 116 aa13.61□□□□□ -0.23
VPS16-204ENST00000417508 TEX13DA0A0J9YY54 714 aaPredicted RBP13.61□□□□□ -0.23
VPS16-204ENST00000417508 RPL35AP18077 110 aaKnown RBP13.61□□□□□ -0.23
VPS16-204ENST00000417508 TCF24Q7RTU0 167 aa13.61□□□□□ -0.23
VPS16-204ENST00000417508 GLYATL2Q8WU03 294 aa13.61□□□□□ -0.23
VPS16-204ENST00000417508 BCL7BQ9BQE9 202 aa13.61□□□□□ -0.23
VPS16-204ENST00000417508 RTBDNQ9BSG5 229 aaPredicted RBP13.61□□□□□ -0.23
VPS16-204ENST00000417508 CSTL1Q9H114 145 aa13.61□□□□□ -0.23
VPS16-204ENST00000417508 PUS1Q9Y606 427 aaKnown RBP eCLIP13.61□□□□□ -0.23
VPS16-204ENST00000417508 TRAV30A0A087WSZ9 112 aa13.6□□□□□ -0.23
VPS16-204ENST00000417508 A0A1W2PS18 150 aa13.6□□□□□ -0.23
VPS16-204ENST00000417508 CLN5O75503 358 aa13.6□□□□□ -0.23
VPS16-204ENST00000417508 DFFBO76075 338 aa13.6□□□□□ -0.23
VPS16-204ENST00000417508 AKAIN1P0CW23 69 aa13.6□□□□□ -0.23
VPS16-204ENST00000417508 NPPCP23582 126 aa13.6□□□□□ -0.23
VPS16-204ENST00000417508 HTR2BP41595 481 aa13.6□□□□□ -0.23
VPS16-204ENST00000417508 BSXQ3C1V8 233 aa13.6□□□□□ -0.23
VPS16-204ENST00000417508 APRG1Q8IVJ8 170 aa13.6□□□□□ -0.23
VPS16-204ENST00000417508 OR4X1Q8NH49 305 aa13.6□□□□□ -0.23
VPS16-204ENST00000417508 RAB2BQ8WUD1 216 aa13.6□□□□□ -0.23
VPS16-204ENST00000417508 GATAD1Q8WUU5 269 aa13.6□□□□□ -0.23
VPS16-204ENST00000417508 RBPMSQ93062 196 aaKnown RBP13.6□□□□□ -0.23
VPS16-204ENST00000417508 DIRAS2Q96HU8 199 aa13.6□□□□□ -0.23
VPS16-204ENST00000417508 GPR132Q9UNW8 380 aa13.6□□□□□ -0.23
VPS16-204ENST00000417508 NUPR2A6NF83 97 aa13.59□□□□□ -0.23
VPS16-204ENST00000417508 MPTX1A8MV57 137 aa13.59□□□□□ -0.23
VPS16-204ENST00000417508 DNASE2O00115 360 aaPredicted RBP13.59□□□□□ -0.23
VPS16-204ENST00000417508 OR5AC1P0C628 307 aa13.59□□□□□ -0.23
VPS16-204ENST00000417508 TFPI2P48307 235 aa13.59□□□□□ -0.23
VPS16-204ENST00000417508 TMBIM6P55061 237 aa13.59□□□□□ -0.23
VPS16-204ENST00000417508 SPCS2Q15005 226 aa13.59□□□□□ -0.23
VPS16-204ENST00000417508 Q6ZRM9 215 aa13.59□□□□□ -0.23
VPS16-204ENST00000417508 ST8SIA2Q92186 375 aa13.59□□□□□ -0.23
VPS16-204ENST00000417508 PRRT1Q99946 306 aa13.59□□□□□ -0.23
VPS16-204ENST00000417508 NAA60Q9H7X0 242 aa13.59□□□□□ -0.23
VPS16-204ENST00000417508 ZFAND3Q9H8U3 227 aa13.59□□□□□ -0.23
VPS16-204ENST00000417508 SACSQ9NZJ4 4579 aa13.59□□□□□ -0.23
VPS16-204ENST00000417508 IGKV3-7A0A075B6H7 116 aa13.58□□□□□ -0.24
VPS16-204ENST00000417508 IGHV3OR16-13A0A075B7E8 117 aa13.58□□□□□ -0.24
VPS16-204ENST00000417508 IGHV3-74A0A0B4J1X5 117 aa13.58□□□□□ -0.24
VPS16-204ENST00000417508 A0A0G2JRQ6 117 aa13.58□□□□□ -0.24
VPS16-204ENST00000417508 RPS10-NUDT3A0A1W2PQS6 291 aa13.58□□□□□ -0.24
VPS16-204ENST00000417508 CXorf65A6NEN9 183 aa13.58□□□□□ -0.24
VPS16-204ENST00000417508 OPRK1P41145 380 aa13.58□□□□□ -0.24
VPS16-204ENST00000417508 IL18Q14116 193 aa13.58□□□□□ -0.24
VPS16-204ENST00000417508 SELENOHQ8IZQ5 122 aaKnown RBP13.58□□□□□ -0.24
VPS16-204ENST00000417508 GBGT1Q8N5D6 347 aa13.58□□□□□ -0.24
VPS16-204ENST00000417508 SCGB3A2Q96PL1 93 aa13.58□□□□□ -0.24
VPS16-204ENST00000417508 FNDC4Q9H6D8 234 aaPredicted RBP13.58□□□□□ -0.24
VPS16-204ENST00000417508 CCDC59Q9P031 241 aaKnown RBP13.58□□□□□ -0.24
VPS16-204ENST00000417508 KCNIP3Q9Y2W7 256 aa13.58□□□□□ -0.24
VPS16-204ENST00000417508 A0A1B0GU03 582 aa13.57□□□□□ -0.24
VPS16-204ENST00000417508 CRYM-AS1A6NIL9 109 aa13.57□□□□□ -0.24
VPS16-204ENST00000417508 APOHP02749 345 aaPredicted RBP13.57□□□□□ -0.24
VPS16-204ENST00000417508 NOXA1Q86UR1 476 aa13.57□□□□□ -0.24
VPS16-204ENST00000417508 CLVS1Q8IUQ0 354 aaPredicted RBP13.57□□□□□ -0.24
VPS16-204ENST00000417508 DYNC2LI1Q8TCX1 351 aa13.57□□□□□ -0.24
VPS16-204ENST00000417508 TMEM230Q96A57 120 aa13.57□□□□□ -0.24
VPS16-204ENST00000417508 NARS2Q96I59 477 aaKnown RBP13.57□□□□□ -0.24
VPS16-204ENST00000417508 METTL26Q96S19 204 aa13.57□□□□□ -0.24
VPS16-204ENST00000417508 MS4A6AQ9H2W1 248 aa13.57□□□□□ -0.24
VPS16-204ENST00000417508 HEYLQ9NQ87 328 aaPredicted RBP13.57□□□□□ -0.24
VPS16-204ENST00000417508 RSL24D1Q9UHA3 163 aaKnown RBP13.57□□□□□ -0.24
VPS16-204ENST00000417508 TMEM56-RWDD3S4R434 201 aa13.57□□□□□ -0.24
VPS16-204ENST00000417508 GSTZ1O43708 216 aaPredicted RBP13.56□□□□□ -0.24
VPS16-204ENST00000417508 SLC25A4P12235 298 aa13.56□□□□□ -0.24
VPS16-204ENST00000417508 CRYBB3P26998 211 aa13.56□□□□□ -0.24
VPS16-204ENST00000417508 RPL11P62913 178 aaKnown RBP13.56□□□□□ -0.24
VPS16-204ENST00000417508 MLANAQ16655 118 aa13.56□□□□□ -0.24
VPS16-204ENST00000417508 C2orf83Q53S99 150 aa13.56□□□□□ -0.24
VPS16-204ENST00000417508 FAAP20Q6NZ36 180 aa13.56□□□□□ -0.24
VPS16-204ENST00000417508 CEMP1Q6PRD7 247 aaPredicted RBP13.56□□□□□ -0.24
VPS16-204ENST00000417508 LILRB2Q8N423 598 aa13.56□□□□□ -0.24
VPS16-204ENST00000417508 OR4C16Q8NGL9 310 aa13.56□□□□□ -0.24
VPS16-204ENST00000417508 RNASEH2CQ8TDP1 164 aaKnown RBP13.56□□□□□ -0.24
VPS16-204ENST00000417508 IL22RA2Q969J5 263 aa13.56□□□□□ -0.24
VPS16-204ENST00000417508 GPR146Q96CH1 333 aa13.56□□□□□ -0.24
VPS16-204ENST00000417508 SCP2D1Q9UJQ7 156 aa13.56□□□□□ -0.24
VPS16-204ENST00000417508 KLK5Q9Y337 293 aaPredicted RBP13.56□□□□□ -0.24
VPS16-204ENST00000417508 DNAH1Q9P2D7 4330 aa13.56□□□□□ -0.24
VPS16-204ENST00000417508 ANKRD20A5PA0PJZ0 165 aa13.55□□□□□ -0.24
VPS16-204ENST00000417508 TMEM268Q5VZI3 342 aa13.55□□□□□ -0.24
VPS16-204ENST00000417508 ETFRF1Q6IPR1 90 aa13.55□□□□□ -0.24
VPS16-204ENST00000417508 OR51S1Q8NGJ8 323 aa13.55□□□□□ -0.24
VPS16-204ENST00000417508 LHFPL5Q8TAF8 219 aa13.55□□□□□ -0.24
VPS16-204ENST00000417508 RARRES2Q99969 163 aa13.55□□□□□ -0.24
VPS16-204ENST00000417508 CACNG5Q9UF02 275 aa13.55□□□□□ -0.24
VPS16-204ENST00000417508 IGKV1-17P01599 117 aa13.54□□□□□ -0.24
VPS16-204ENST00000417508 EWSR1Q01844 656 aaKnown RBP eCLIP13.54□□□□□ -0.24
VPS16-204ENST00000417508 PMS2P11Q13670 270 aa13.54□□□□□ -0.24
VPS16-204ENST00000417508 ZNF124Q15973 351 aa13.54□□□□□ -0.24
VPS16-204ENST00000417508 OR1S2Q8NGQ3 325 aa13.54□□□□□ -0.24
VPS16-204ENST00000417508 GRAMD2BQ96HH9 432 aa13.54□□□□□ -0.24
VPS16-204ENST00000417508 MRPL36Q9P0J6 103 aaKnown RBP13.54□□□□□ -0.24
VPS16-204ENST00000417508 PIGBOS1A0A0B4J2F0 54 aa13.53□□□□□ -0.24
VPS16-204ENST00000417508 CEBPZOSA8MTT3 80 aa13.53□□□□□ -0.24
VPS16-204ENST00000417508 EIF2B2P49770 351 aaKnown RBP13.53□□□□□ -0.24
VPS16-204ENST00000417508 DEFB131AP59861 70 aa13.53□□□□□ -0.24
VPS16-204ENST00000417508 YPEL3P61236 119 aaPredicted RBP13.53□□□□□ -0.24
VPS16-204ENST00000417508 Q8WTZ3 238 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms