RNA–Protein interactions for RNA: ENST00000417271.1

SLC8A1-210, Transcript of solute carrier family 8 member A1, humanhuman

TSL 1 (best)

Gene SLC8A1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC8A1-210ENST00000417271 CHAC2Q8WUX2 184 aa4.24□□□□□ -1.73
SLC8A1-210ENST00000417271 WDR89Q96FK6 387 aaPredicted RBP4.24□□□□□ -1.73
SLC8A1-210ENST00000417271 PRR25Q96S07 402 aa4.24□□□□□ -1.73
SLC8A1-210ENST00000417271 MARVELD1Q9BSK0 173 aa4.24□□□□□ -1.73
SLC8A1-210ENST00000417271 HIPK2Q9H2X6 1198 aa4.24□□□□□ -1.73
SLC8A1-210ENST00000417271 THYN1Q9P016 225 aa4.24□□□□□ -1.73
SLC8A1-210ENST00000417271 RCL1Q9Y2P8 373 aaKnown RBP4.24□□□□□ -1.73
SLC8A1-210ENST00000417271 IGHV3-49A0A0A0MS15 119 aa4.23□□□□□ -1.73
SLC8A1-210ENST00000417271 TMEM213A2RRL7 107 aa4.23□□□□□ -1.73
SLC8A1-210ENST00000417271 C2orf70A6NJV1 201 aa4.23□□□□□ -1.73
SLC8A1-210ENST00000417271 GOSR2O14653 212 aa4.23□□□□□ -1.73
SLC8A1-210ENST00000417271 GNG7O60262 68 aa4.23□□□□□ -1.73
SLC8A1-210ENST00000417271 CCNKO75909 580 aa4.23□□□□□ -1.73
SLC8A1-210ENST00000417271 MBPP02686 304 aaPredicted RBP4.23□□□□□ -1.73
SLC8A1-210ENST00000417271 CTSGP08311 255 aa4.23□□□□□ -1.73
SLC8A1-210ENST00000417271 HTR2BP41595 481 aa4.23□□□□□ -1.73
SLC8A1-210ENST00000417271 NKX2-1P43699 371 aaPredicted RBP4.23□□□□□ -1.73
SLC8A1-210ENST00000417271 RND2P52198 227 aa4.23□□□□□ -1.73
SLC8A1-210ENST00000417271 SUB1P53999 127 aaKnown RBP eCLIP4.23□□□□□ -1.73
SLC8A1-210ENST00000417271 MFAP4P55083 255 aa4.23□□□□□ -1.73
SLC8A1-210ENST00000417271 ID3Q02535 119 aa4.23□□□□□ -1.73
SLC8A1-210ENST00000417271 EGFEM1PQ0D2K5 195 aa4.23□□□□□ -1.73
SLC8A1-210ENST00000417271 TATDN3Q17R31 274 aa4.23□□□□□ -1.73
SLC8A1-210ENST00000417271 TIGITQ495A1 244 aa4.23□□□□□ -1.73
SLC8A1-210ENST00000417271 TM4SF20Q53R12 229 aa4.23□□□□□ -1.73
SLC8A1-210ENST00000417271 SPANXN5Q5MJ07 72 aa4.23□□□□□ -1.73
SLC8A1-210ENST00000417271 C9orf66Q5T8R8 295 aa4.23□□□□□ -1.73
SLC8A1-210ENST00000417271 PRSS54Q6PEW0 395 aa4.23□□□□□ -1.73
SLC8A1-210ENST00000417271 SLC16A13Q7RTY0 426 aa4.23□□□□□ -1.73
SLC8A1-210ENST00000417271 OR1L6Q8NGR2 347 aa4.23□□□□□ -1.73
SLC8A1-210ENST00000417271 BSCL2Q96G97 398 aaPredicted RBP4.23□□□□□ -1.73
SLC8A1-210ENST00000417271 ACY3Q96HD9 319 aa4.23□□□□□ -1.73
SLC8A1-210ENST00000417271 MCRIP2Q9BUT9 160 aaKnown RBP4.23□□□□□ -1.73
SLC8A1-210ENST00000417271 C20orf24Q9BUV8 137 aa4.23□□□□□ -1.73
SLC8A1-210ENST00000417271 AURKAIP1Q9NWT8 199 aaPredicted RBP4.23□□□□□ -1.73
SLC8A1-210ENST00000417271 LSM5Q9Y4Y9 91 aaKnown RBP4.23□□□□□ -1.73
SLC8A1-210ENST00000417271 IGHV3OR16-13A0A075B7E8 117 aa4.22□□□□□ -1.73
SLC8A1-210ENST00000417271 IGHV3-74A0A0B4J1X5 117 aa4.22□□□□□ -1.73
SLC8A1-210ENST00000417271 PIGBOS1A0A0B4J2F0 54 aa4.22□□□□□ -1.73
SLC8A1-210ENST00000417271 LOC100996750A0A140TA64 210 aa4.22□□□□□ -1.73
SLC8A1-210ENST00000417271 WI2-2373I1.2A0A1W2PRP0 233 aa4.22□□□□□ -1.73
SLC8A1-210ENST00000417271 IZUMO1RA6ND01 250 aa4.22□□□□□ -1.73
SLC8A1-210ENST00000417271 FAM90A26D6RGX4 464 aa4.22□□□□□ -1.73
SLC8A1-210ENST00000417271 PRSS46E5RG02 174 aa4.22□□□□□ -1.73
SLC8A1-210ENST00000417271 K7EPK0 472 aa4.22□□□□□ -1.73
SLC8A1-210ENST00000417271 CORTO00230 105 aa4.22□□□□□ -1.73
SLC8A1-210ENST00000417271 NUPL2O15504 423 aaKnown RBP4.22□□□□□ -1.73
SLC8A1-210ENST00000417271 WIPF1O43516 503 aa4.22□□□□□ -1.73
SLC8A1-210ENST00000417271 SSNA1O43805 119 aa4.22□□□□□ -1.73
SLC8A1-210ENST00000417271 PRAF2O60831 178 aa4.22□□□□□ -1.73
SLC8A1-210ENST00000417271 MED6O75586 246 aa4.22□□□□□ -1.73
SLC8A1-210ENST00000417271 YIF1AO95070 293 aa4.22□□□□□ -1.73
SLC8A1-210ENST00000417271 LY86O95711 162 aa4.22□□□□□ -1.73
SLC8A1-210ENST00000417271 PTTG1O95997 202 aa4.22□□□□□ -1.73
SLC8A1-210ENST00000417271 IGKV1-17P01599 117 aa4.22□□□□□ -1.73
SLC8A1-210ENST00000417271 IFNA4P05014 189 aa4.22□□□□□ -1.73
SLC8A1-210ENST00000417271 FOLR2P14207 255 aa4.22□□□□□ -1.73
SLC8A1-210ENST00000417271 PAX9P55771 341 aa4.22□□□□□ -1.73
SLC8A1-210ENST00000417271 H2BFSP57053 126 aa4.22□□□□□ -1.73
SLC8A1-210ENST00000417271 S100A10P60903 97 aa4.22□□□□□ -1.73
SLC8A1-210ENST00000417271 DCTN2Q13561 401 aaKnown RBP4.22□□□□□ -1.73
SLC8A1-210ENST00000417271 FAM209BQ5JX69 171 aa4.22□□□□□ -1.73
SLC8A1-210ENST00000417271 GSG1LQ6UXU4 331 aa4.22□□□□□ -1.73
SLC8A1-210ENST00000417271 REC114Q7Z4M0 266 aa4.22□□□□□ -1.73
SLC8A1-210ENST00000417271 GPHB5Q86YW7 130 aa4.22□□□□□ -1.73
SLC8A1-210ENST00000417271 RNASEH2CQ8TDP1 164 aaKnown RBP4.22□□□□□ -1.73
SLC8A1-210ENST00000417271 TMEM190Q8WZ59 177 aa4.22□□□□□ -1.73
SLC8A1-210ENST00000417271 NPIPB3Q92617 1050 aa4.22□□□□□ -1.73
SLC8A1-210ENST00000417271 C2orf50Q96LR7 162 aa4.22□□□□□ -1.73
SLC8A1-210ENST00000417271 ELOVL1Q9BW60 279 aa4.22□□□□□ -1.73
SLC8A1-210ENST00000417271 KRTAP4-6Q9BYQ5 205 aa4.22□□□□□ -1.73
SLC8A1-210ENST00000417271 ZNF436Q9C0F3 470 aaPredicted RBP4.22□□□□□ -1.73
SLC8A1-210ENST00000417271 GPN1Q9HCN4 374 aaPredicted RBP4.22□□□□□ -1.73
SLC8A1-210ENST00000417271 PSENENQ9NZ42 101 aa4.22□□□□□ -1.73
SLC8A1-210ENST00000417271 MLXQ9UH92 298 aa4.22□□□□□ -1.73
SLC8A1-210ENST00000417271 ALG5Q9Y673 324 aa4.22□□□□□ -1.73
SLC8A1-210ENST00000417271 U3KQ87 197 aa4.22□□□□□ -1.73
SLC8A1-210ENST00000417271 NOTCH3Q9UM47 2321 aa4.22□□□□□ -1.73
SLC8A1-210ENST00000417271 CMYA5Q8N3K9 4069 aa4.21□□□□□ -1.74
SLC8A1-210ENST00000417271 VWFP04275 2813 aa4.21□□□□□ -1.74
SLC8A1-210ENST00000417271 IGKV1D-37A0A075B6S9 117 aa4.21□□□□□ -1.74
SLC8A1-210ENST00000417271 IGHV3-66A0A0C4DH42 116 aa4.21□□□□□ -1.74
SLC8A1-210ENST00000417271 RPS10-NUDT3A0A1W2PQS6 291 aa4.21□□□□□ -1.74
SLC8A1-210ENST00000417271 C7orf66A4D0T2 115 aa4.21□□□□□ -1.74
SLC8A1-210ENST00000417271 SNRPGP15A8MWD9 76 aa4.21□□□□□ -1.74
SLC8A1-210ENST00000417271 A8MWP6 167 aa4.21□□□□□ -1.74
SLC8A1-210ENST00000417271 K7EIL1 84 aa4.21□□□□□ -1.74
SLC8A1-210ENST00000417271 LGALS9O00182 355 aa4.21□□□□□ -1.74
SLC8A1-210ENST00000417271 NDUFA4O00483 81 aa4.21□□□□□ -1.74
SLC8A1-210ENST00000417271 EREGO14944 169 aa4.21□□□□□ -1.74
SLC8A1-210ENST00000417271 CLN5O75503 358 aa4.21□□□□□ -1.74
SLC8A1-210ENST00000417271 IGLV1-51P01701 117 aa4.21□□□□□ -1.74
SLC8A1-210ENST00000417271 METTL15P1P0C7V9 234 aa4.21□□□□□ -1.74
SLC8A1-210ENST00000417271 IGLC1P0CG04 106 aa4.21□□□□□ -1.74
SLC8A1-210ENST00000417271 CBLN1P23435 193 aa4.21□□□□□ -1.74
SLC8A1-210ENST00000417271 OR10J1P30954 320 aa4.21□□□□□ -1.74
SLC8A1-210ENST00000417271 FCGR2BP31994 310 aaPredicted RBP4.21□□□□□ -1.74
SLC8A1-210ENST00000417271 NPBWR1P48145 328 aa4.21□□□□□ -1.74
SLC8A1-210ENST00000417271 RRAS2P62070 204 aaPredicted RBP4.21□□□□□ -1.74
SLC8A1-210ENST00000417271 CD69Q07108 199 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms