RNA–Protein interactions for RNA: ENST00000416778.5

CPNE1-210, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-210ENST00000416778 IGHV3OR16-13A0A075B7E8 117 aa13.22□□□□□ -0.29
CPNE1-210ENST00000416778 IGHV3-74A0A0B4J1X5 117 aa13.22□□□□□ -0.29
CPNE1-210ENST00000416778 KIR2DL5BA0A0G2JN68 375 aa13.22□□□□□ -0.29
CPNE1-210ENST00000416778 KIR2DL5BA0A0G2JPC4 375 aa13.22□□□□□ -0.29
CPNE1-210ENST00000416778 ANKRD20A5PA0PJZ0 165 aa13.22□□□□□ -0.29
CPNE1-210ENST00000416778 APOHP02749 345 aaPredicted RBP13.22□□□□□ -0.29
CPNE1-210ENST00000416778 TNFSF8P32971 234 aa13.22□□□□□ -0.29
CPNE1-210ENST00000416778 APOC4P55056 127 aa13.22□□□□□ -0.29
CPNE1-210ENST00000416778 CMC4P56277 68 aaPredicted RBP13.22□□□□□ -0.29
CPNE1-210ENST00000416778 KIR2DL5AQ8N109 375 aa13.22□□□□□ -0.29
CPNE1-210ENST00000416778 OR51S1Q8NGJ8 323 aa13.22□□□□□ -0.29
CPNE1-210ENST00000416778 KIR2DL5BQ8NHK3 375 aa13.22□□□□□ -0.29
CPNE1-210ENST00000416778 VSIRQ9H7M9 311 aa13.22□□□□□ -0.29
CPNE1-210ENST00000416778 TP53TG1Q9Y2A0 90 aa13.22□□□□□ -0.29
CPNE1-210ENST00000416778 TMEM56-RWDD3S4R434 201 aa13.22□□□□□ -0.29
CPNE1-210ENST00000416778 A0A1B0GU03 582 aa13.21□□□□□ -0.29
CPNE1-210ENST00000416778 CRYM-AS1A6NIL9 109 aa13.21□□□□□ -0.29
CPNE1-210ENST00000416778 CORTO00230 105 aa13.21□□□□□ -0.29
CPNE1-210ENST00000416778 SPRY2O43597 315 aa13.21□□□□□ -0.29
CPNE1-210ENST00000416778 ZNF600Q6ZNG1 722 aa13.21□□□□□ -0.29
CPNE1-210ENST00000416778 APRG1Q8IVJ8 170 aa13.21□□□□□ -0.29
CPNE1-210ENST00000416778 OR4X1Q8NH49 305 aa13.21□□□□□ -0.29
CPNE1-210ENST00000416778 RBPMSQ93062 196 aaKnown RBP13.21□□□□□ -0.29
CPNE1-210ENST00000416778 GALNT14Q96FL9 552 aa13.21□□□□□ -0.29
CPNE1-210ENST00000416778 PRRT1Q99946 306 aa13.21□□□□□ -0.29
CPNE1-210ENST00000416778 ZFAND3Q9H8U3 227 aa13.21□□□□□ -0.29
CPNE1-210ENST00000416778 MAP6D1Q9H9H5 199 aa13.21□□□□□ -0.29
CPNE1-210ENST00000416778 ENY2Q9NPA8 101 aa13.21□□□□□ -0.29
CPNE1-210ENST00000416778 RSL24D1Q9UHA3 163 aaKnown RBP13.21□□□□□ -0.29
CPNE1-210ENST00000416778 PUS1Q9Y606 427 aaKnown RBP eCLIP13.21□□□□□ -0.29
CPNE1-210ENST00000416778 H3BMQ9 156 aa13.2□□□□□ -0.3
CPNE1-210ENST00000416778 CLN5O75503 358 aa13.2□□□□□ -0.3
CPNE1-210ENST00000416778 RPL35AP18077 110 aaKnown RBP13.2□□□□□ -0.3
CPNE1-210ENST00000416778 TFPI2P48307 235 aa13.2□□□□□ -0.3
CPNE1-210ENST00000416778 HOXA1P49639 335 aaPredicted RBP13.2□□□□□ -0.3
CPNE1-210ENST00000416778 GBGT1Q8N5D6 347 aa13.2□□□□□ -0.3
CPNE1-210ENST00000416778 RNASE11Q8TAA1 199 aaKnown RBP13.2□□□□□ -0.3
CPNE1-210ENST00000416778 ST8SIA2Q92186 375 aa13.2□□□□□ -0.3
CPNE1-210ENST00000416778 RNF183Q96D59 192 aa13.2□□□□□ -0.3
CPNE1-210ENST00000416778 GINS3Q9BRX5 216 aa13.2□□□□□ -0.3
CPNE1-210ENST00000416778 C6orf62Q9GZU0 229 aaPredicted RBP13.2□□□□□ -0.3
CPNE1-210ENST00000416778 IGKV3-7A0A075B6H7 116 aa13.19□□□□□ -0.3
CPNE1-210ENST00000416778 FABP12A6NFH5 140 aa13.19□□□□□ -0.3
CPNE1-210ENST00000416778 CD5P06127 495 aa13.19□□□□□ -0.3
CPNE1-210ENST00000416778 BMI1P35226 326 aa13.19□□□□□ -0.3
CPNE1-210ENST00000416778 ZNF124Q15973 351 aa13.19□□□□□ -0.3
CPNE1-210ENST00000416778 TMEM268Q5VZI3 342 aa13.19□□□□□ -0.3
CPNE1-210ENST00000416778 TCF24Q7RTU0 167 aa13.19□□□□□ -0.3
CPNE1-210ENST00000416778 STPG3Q8N7X2 389 aa13.19□□□□□ -0.3
CPNE1-210ENST00000416778 TMEM230Q96A57 120 aa13.19□□□□□ -0.3
CPNE1-210ENST00000416778 PLECQ15149 4684 aaKnown RBP13.19□□□□□ -0.3
CPNE1-210ENST00000416778 DFFBO76075 338 aa13.18□□□□□ -0.3
CPNE1-210ENST00000416778 IGKV1-17P01599 117 aa13.18□□□□□ -0.3
CPNE1-210ENST00000416778 HTR2BP41595 481 aa13.18□□□□□ -0.3
CPNE1-210ENST00000416778 TNFRSF9Q07011 255 aa13.18□□□□□ -0.3
CPNE1-210ENST00000416778 TMEM187Q14656 261 aa13.18□□□□□ -0.3
CPNE1-210ENST00000416778 C2orf83Q53S99 150 aa13.18□□□□□ -0.3
CPNE1-210ENST00000416778 HEYLQ9NQ87 328 aaPredicted RBP13.18□□□□□ -0.3
CPNE1-210ENST00000416778 CACNG5Q9UF02 275 aa13.18□□□□□ -0.3
CPNE1-210ENST00000416778 KCNIP3Q9Y2W7 256 aa13.18□□□□□ -0.3
CPNE1-210ENST00000416778 IGHV3-66A0A0C4DH42 116 aa13.17□□□□□ -0.3
CPNE1-210ENST00000416778 NPPCP23582 126 aa13.17□□□□□ -0.3
CPNE1-210ENST00000416778 OPRK1P41145 380 aa13.17□□□□□ -0.3
CPNE1-210ENST00000416778 PAFAH1B2P68402 229 aa13.17□□□□□ -0.3
CPNE1-210ENST00000416778 EWSR1Q01844 656 aaKnown RBP eCLIP13.17□□□□□ -0.3
CPNE1-210ENST00000416778 DEFB135Q30KP9 77 aa13.17□□□□□ -0.3
CPNE1-210ENST00000416778 TMEM170AQ8WVE7 144 aa13.17□□□□□ -0.3
CPNE1-210ENST00000416778 IL22RA2Q969J5 263 aa13.17□□□□□ -0.3
CPNE1-210ENST00000416778 SCGB3A2Q96PL1 93 aa13.17□□□□□ -0.3
CPNE1-210ENST00000416778 CSTL1Q9H114 145 aa13.17□□□□□ -0.3
CPNE1-210ENST00000416778 MS4A6AQ9H2W1 248 aa13.17□□□□□ -0.3
CPNE1-210ENST00000416778 SCP2D1Q9UJQ7 156 aa13.17□□□□□ -0.3
CPNE1-210ENST00000416778 TRAV30A0A087WSZ9 112 aa13.16□□□□□ -0.3
CPNE1-210ENST00000416778 A0A0J9YWU9 116 aa13.16□□□□□ -0.3
CPNE1-210ENST00000416778 CRYBB3P26998 211 aa13.16□□□□□ -0.3
CPNE1-210ENST00000416778 TIGITQ495A1 244 aa13.16□□□□□ -0.3
CPNE1-210ENST00000416778 NMSQ5H8A3 153 aa13.16□□□□□ -0.3
CPNE1-210ENST00000416778 LYG2Q86SG7 212 aa13.16□□□□□ -0.3
CPNE1-210ENST00000416778 MCFD2Q8NI22 146 aa13.16□□□□□ -0.3
CPNE1-210ENST00000416778 PRR13Q9NZ81 148 aa13.16□□□□□ -0.3
CPNE1-210ENST00000416778 SUPT4H1P63272 117 aaKnown RBP13.15□□□□□ -0.3
CPNE1-210ENST00000416778 PRSS54Q6PEW0 395 aa13.15□□□□□ -0.3
CPNE1-210ENST00000416778 RNASEH2CQ8TDP1 164 aaKnown RBP13.15□□□□□ -0.3
CPNE1-210ENST00000416778 TRAV2A0A0B4J234 112 aa13.14□□□□□ -0.31
CPNE1-210ENST00000416778 CEBPZOSA8MTT3 80 aa13.14□□□□□ -0.31
CPNE1-210ENST00000416778 DNASE2O00115 360 aaPredicted RBP13.14□□□□□ -0.31
CPNE1-210ENST00000416778 AKR1C4P17516 323 aa13.14□□□□□ -0.31
CPNE1-210ENST00000416778 LYZL2Q7Z4W2 148 aa13.14□□□□□ -0.31
CPNE1-210ENST00000416778 MCUBQ9NWR8 336 aa13.14□□□□□ -0.31
CPNE1-210ENST00000416778 CACFD1Q9UGQ2 172 aa13.14□□□□□ -0.31
CPNE1-210ENST00000416778 U3KQE9 123 aa13.14□□□□□ -0.31
CPNE1-210ENST00000416778 HYDINQ4G0P3 5121 aa13.13□□□□□ -0.31
CPNE1-210ENST00000416778 A0A0B4J2A0 478 aa13.13□□□□□ -0.31
CPNE1-210ENST00000416778 RPS10-NUDT3A0A1W2PQS6 291 aa13.13□□□□□ -0.31
CPNE1-210ENST00000416778 A0A1W2PS18 150 aa13.13□□□□□ -0.31
CPNE1-210ENST00000416778 MPTX1A8MV57 137 aa13.13□□□□□ -0.31
CPNE1-210ENST00000416778 NOL3O60936 208 aaKnown RBP13.13□□□□□ -0.31
CPNE1-210ENST00000416778 IGLC1P0CG04 106 aa13.13□□□□□ -0.31
CPNE1-210ENST00000416778 SULT1A3P0DMM9 295 aa13.13□□□□□ -0.31
CPNE1-210ENST00000416778 SULT1A4P0DMN0 295 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms