RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 DIRAS2Q96HU8 199 aa13□□□□□ -0.33
PDLIM2-208ENST00000416159 RTBDNQ9BSG5 229 aaPredicted RBP13□□□□□ -0.33
PDLIM2-208ENST00000416159 CTNNBIP1Q9NSA3 81 aaPredicted RBP13□□□□□ -0.33
PDLIM2-208ENST00000416159 PUS1Q9Y606 427 aaKnown RBP eCLIP13□□□□□ -0.33
PDLIM2-208ENST00000416159 IGKV3-7A0A075B6H7 116 aa12.99□□□□□ -0.33
PDLIM2-208ENST00000416159 A0A0J9YWU9 116 aa12.99□□□□□ -0.33
PDLIM2-208ENST00000416159 SCGB2A1O75556 95 aa12.99□□□□□ -0.33
PDLIM2-208ENST00000416159 OR5AC1P0C628 307 aa12.99□□□□□ -0.33
PDLIM2-208ENST00000416159 AKAIN1P0CW23 69 aa12.99□□□□□ -0.33
PDLIM2-208ENST00000416159 IL18Q14116 193 aa12.99□□□□□ -0.33
PDLIM2-208ENST00000416159 AARDQ4LEZ3 155 aa12.99□□□□□ -0.33
PDLIM2-208ENST00000416159 FAAP20Q6NZ36 180 aa12.99□□□□□ -0.33
PDLIM2-208ENST00000416159 CLVS1Q8IUQ0 354 aaPredicted RBP12.99□□□□□ -0.33
PDLIM2-208ENST00000416159 APRG1Q8IVJ8 170 aa12.99□□□□□ -0.33
PDLIM2-208ENST00000416159 GBGT1Q8N5D6 347 aa12.99□□□□□ -0.33
PDLIM2-208ENST00000416159 OR52E5Q8NH55 327 aa12.99□□□□□ -0.33
PDLIM2-208ENST00000416159 GLYATL2Q8WU03 294 aa12.99□□□□□ -0.33
PDLIM2-208ENST00000416159 RAB2BQ8WUD1 216 aa12.99□□□□□ -0.33
PDLIM2-208ENST00000416159 RBPMSQ93062 196 aaKnown RBP12.99□□□□□ -0.33
PDLIM2-208ENST00000416159 TMEM231Q9H6L2 316 aa12.99□□□□□ -0.33
PDLIM2-208ENST00000416159 NAA60Q9H7X0 242 aa12.99□□□□□ -0.33
PDLIM2-208ENST00000416159 GPR132Q9UNW8 380 aa12.99□□□□□ -0.33
PDLIM2-208ENST00000416159 CLN5O75503 358 aa12.98□□□□□ -0.33
PDLIM2-208ENST00000416159 ATF4P18848 351 aaPredicted RBP12.98□□□□□ -0.33
PDLIM2-208ENST00000416159 OPRK1P41145 380 aa12.98□□□□□ -0.33
PDLIM2-208ENST00000416159 BSXQ3C1V8 233 aa12.98□□□□□ -0.33
PDLIM2-208ENST00000416159 Q6ZRM9 215 aa12.98□□□□□ -0.33
PDLIM2-208ENST00000416159 OR4X1Q8NH49 305 aa12.98□□□□□ -0.33
PDLIM2-208ENST00000416159 ST8SIA2Q92186 375 aa12.98□□□□□ -0.33
PDLIM2-208ENST00000416159 BCL7BQ9BQE9 202 aa12.98□□□□□ -0.33
PDLIM2-208ENST00000416159 CSTL1Q9H114 145 aa12.98□□□□□ -0.33
PDLIM2-208ENST00000416159 FNDC4Q9H6D8 234 aaPredicted RBP12.98□□□□□ -0.33
PDLIM2-208ENST00000416159 ZFAND3Q9H8U3 227 aa12.98□□□□□ -0.33
PDLIM2-208ENST00000416159 CCDC59Q9P031 241 aaKnown RBP12.98□□□□□ -0.33
PDLIM2-208ENST00000416159 A0A1W2PS18 150 aa12.97□□□□□ -0.33
PDLIM2-208ENST00000416159 DNASE2O00115 360 aaPredicted RBP12.97□□□□□ -0.33
PDLIM2-208ENST00000416159 APOHP02749 345 aaPredicted RBP12.97□□□□□ -0.33
PDLIM2-208ENST00000416159 NPPCP23582 126 aa12.97□□□□□ -0.33
PDLIM2-208ENST00000416159 HTR2BP41595 481 aa12.97□□□□□ -0.33
PDLIM2-208ENST00000416159 TMBIM6P55061 237 aa12.97□□□□□ -0.33
PDLIM2-208ENST00000416159 MLANAQ16655 118 aa12.97□□□□□ -0.33
PDLIM2-208ENST00000416159 SELENOHQ8IZQ5 122 aaKnown RBP12.97□□□□□ -0.33
PDLIM2-208ENST00000416159 TMEM217Q8N7C4 229 aa12.97□□□□□ -0.33
PDLIM2-208ENST00000416159 OR4C16Q8NGL9 310 aa12.97□□□□□ -0.33
PDLIM2-208ENST00000416159 PRRT1Q99946 306 aa12.97□□□□□ -0.33
PDLIM2-208ENST00000416159 TRAV30A0A087WSZ9 112 aa12.96□□□□□ -0.33
PDLIM2-208ENST00000416159 TRAV2A0A0B4J234 112 aa12.96□□□□□ -0.33
PDLIM2-208ENST00000416159 A0A1B0GU03 582 aa12.96□□□□□ -0.33
PDLIM2-208ENST00000416159 RPS10-NUDT3A0A1W2PQS6 291 aa12.96□□□□□ -0.33
PDLIM2-208ENST00000416159 CXorf65A6NEN9 183 aa12.96□□□□□ -0.33
PDLIM2-208ENST00000416159 CRYM-AS1A6NIL9 109 aa12.96□□□□□ -0.33
PDLIM2-208ENST00000416159 MPTX1A8MV57 137 aa12.96□□□□□ -0.33
PDLIM2-208ENST00000416159 DFFBO76075 338 aa12.96□□□□□ -0.33
PDLIM2-208ENST00000416159 ZNF124Q15973 351 aa12.96□□□□□ -0.33
PDLIM2-208ENST00000416159 LILRB2Q8N423 598 aa12.96□□□□□ -0.33
PDLIM2-208ENST00000416159 LHFPL5Q8TAF8 219 aa12.96□□□□□ -0.33
PDLIM2-208ENST00000416159 DYNC2LI1Q8TCX1 351 aa12.96□□□□□ -0.33
PDLIM2-208ENST00000416159 GPR146Q96CH1 333 aa12.96□□□□□ -0.33
PDLIM2-208ENST00000416159 MRPL36Q9P0J6 103 aaKnown RBP12.96□□□□□ -0.33
PDLIM2-208ENST00000416159 KCNIP3Q9Y2W7 256 aa12.96□□□□□ -0.33
PDLIM2-208ENST00000416159 DNAH1Q9P2D7 4330 aa12.96□□□□□ -0.34
PDLIM2-208ENST00000416159 NUPR2A6NF83 97 aa12.95□□□□□ -0.34
PDLIM2-208ENST00000416159 RPL11P62913 178 aaKnown RBP12.95□□□□□ -0.34
PDLIM2-208ENST00000416159 PMS2P11Q13670 270 aa12.95□□□□□ -0.34
PDLIM2-208ENST00000416159 TMEM268Q5VZI3 342 aa12.95□□□□□ -0.34
PDLIM2-208ENST00000416159 OR51S1Q8NGJ8 323 aa12.95□□□□□ -0.34
PDLIM2-208ENST00000416159 GATAD1Q8WUU5 269 aa12.95□□□□□ -0.34
PDLIM2-208ENST00000416159 TMEM230Q96A57 120 aa12.95□□□□□ -0.34
PDLIM2-208ENST00000416159 SCGB3A2Q96PL1 93 aa12.95□□□□□ -0.34
PDLIM2-208ENST00000416159 METTL26Q96S19 204 aa12.95□□□□□ -0.34
PDLIM2-208ENST00000416159 MS4A6AQ9H2W1 248 aa12.95□□□□□ -0.34
PDLIM2-208ENST00000416159 HEYLQ9NQ87 328 aaPredicted RBP12.95□□□□□ -0.34
PDLIM2-208ENST00000416159 CACNG5Q9UF02 275 aa12.95□□□□□ -0.34
PDLIM2-208ENST00000416159 CACFD1Q9UGQ2 172 aa12.95□□□□□ -0.34
PDLIM2-208ENST00000416159 RSL24D1Q9UHA3 163 aaKnown RBP12.95□□□□□ -0.34
PDLIM2-208ENST00000416159 SCP2D1Q9UJQ7 156 aa12.95□□□□□ -0.34
PDLIM2-208ENST00000416159 IGHV3-66A0A0C4DH42 116 aa12.94□□□□□ -0.34
PDLIM2-208ENST00000416159 ANKRD20A5PA0PJZ0 165 aa12.94□□□□□ -0.34
PDLIM2-208ENST00000416159 GSTZ1O43708 216 aaPredicted RBP12.94□□□□□ -0.34
PDLIM2-208ENST00000416159 CRYBB3P26998 211 aa12.94□□□□□ -0.34
PDLIM2-208ENST00000416159 EWSR1Q01844 656 aaKnown RBP eCLIP12.94□□□□□ -0.34
PDLIM2-208ENST00000416159 C2orf83Q53S99 150 aa12.94□□□□□ -0.34
PDLIM2-208ENST00000416159 IL22RA2Q969J5 263 aa12.94□□□□□ -0.34
PDLIM2-208ENST00000416159 NARS2Q96I59 477 aaKnown RBP12.94□□□□□ -0.34
PDLIM2-208ENST00000416159 TMEM56-RWDD3S4R434 201 aa12.94□□□□□ -0.34
PDLIM2-208ENST00000416159 CEBPZOSA8MTT3 80 aa12.93□□□□□ -0.34
PDLIM2-208ENST00000416159 SLC25A4P12235 298 aa12.93□□□□□ -0.34
PDLIM2-208ENST00000416159 DEFB131AP59861 70 aa12.93□□□□□ -0.34
PDLIM2-208ENST00000416159 CEMP1Q6PRD7 247 aaPredicted RBP12.93□□□□□ -0.34
PDLIM2-208ENST00000416159 OR1S2Q8NGQ3 325 aa12.93□□□□□ -0.34
PDLIM2-208ENST00000416159 RNASEH2CQ8TDP1 164 aaKnown RBP12.93□□□□□ -0.34
PDLIM2-208ENST00000416159 NOL3O60936 208 aaKnown RBP12.92□□□□□ -0.34
PDLIM2-208ENST00000416159 IGKV1-17P01599 117 aa12.92□□□□□ -0.34
PDLIM2-208ENST00000416159 TMEM187Q14656 261 aa12.92□□□□□ -0.34
PDLIM2-208ENST00000416159 TIGITQ495A1 244 aa12.92□□□□□ -0.34
PDLIM2-208ENST00000416159 ETFRF1Q6IPR1 90 aa12.92□□□□□ -0.34
PDLIM2-208ENST00000416159 NOXA1Q86UR1 476 aa12.92□□□□□ -0.34
PDLIM2-208ENST00000416159 SLC24A4Q8NFF2 622 aa12.92□□□□□ -0.34
PDLIM2-208ENST00000416159 RARRES2Q99969 163 aa12.92□□□□□ -0.34
PDLIM2-208ENST00000416159 RABAC1Q9UI14 185 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms