RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 ADIPOQQ15848 244 aa14.29□□□□□ -0.12
PHRF1-202ENST00000413872 TMEM101Q96IK0 257 aa14.29□□□□□ -0.12
PHRF1-202ENST00000413872 KLHDC3Q9BQ90 382 aa14.29□□□□□ -0.12
PHRF1-202ENST00000413872 PSPNO60542 156 aa14.29□□□□□ -0.12
PHRF1-202ENST00000413872 CD24P25063 80 aa14.29□□□□□ -0.12
PHRF1-202ENST00000413872 IFITM2Q01629 132 aa14.29□□□□□ -0.12
PHRF1-202ENST00000413872 PRSS8Q16651 343 aa14.29□□□□□ -0.12
PHRF1-202ENST00000413872 CD177Q8N6Q3 437 aa14.29□□□□□ -0.12
PHRF1-202ENST00000413872 MPTX1A8MV57 137 aa14.29□□□□□ -0.12
PHRF1-202ENST00000413872 STHQ8IWL8 128 aa14.29□□□□□ -0.12
PHRF1-202ENST00000413872 MARVELD3Q96A59 401 aa14.29□□□□□ -0.12
PHRF1-202ENST00000413872 RAB37Q96AX2 223 aa14.29□□□□□ -0.12
PHRF1-202ENST00000413872 IL36BQ9NZH7 164 aa14.29□□□□□ -0.12
PHRF1-202ENST00000413872 M0R381 172 aa14.28□□□□□ -0.12
PHRF1-202ENST00000413872 LDLRAD4O15165 306 aa14.28□□□□□ -0.12
PHRF1-202ENST00000413872 PAX8Q06710 450 aa14.28□□□□□ -0.12
PHRF1-202ENST00000413872 ARTNQ5T4W7 220 aa14.28□□□□□ -0.12
PHRF1-202ENST00000413872 RPP21Q9H633 154 aaKnown RBP14.28□□□□□ -0.12
PHRF1-202ENST00000413872 IGHV1-3A0A0C4DH29 117 aa14.28□□□□□ -0.12
PHRF1-202ENST00000413872 LGALS3P17931 250 aaKnown RBP14.28□□□□□ -0.12
PHRF1-202ENST00000413872 SLC25A48Q6ZT89 311 aaKnown RBP14.28□□□□□ -0.12
PHRF1-202ENST00000413872 COL4A6Q14031 1691 aa14.28□□□□□ -0.12
PHRF1-202ENST00000413872 TGIF2-C20orf24A0A0A6YYL0 155 aa14.28□□□□□ -0.12
PHRF1-202ENST00000413872 EGR1P18146 543 aa14.28□□□□□ -0.12
PHRF1-202ENST00000413872 DTX1Q86Y01 620 aa14.28□□□□□ -0.12
PHRF1-202ENST00000413872 A0A1W2PRE2 83 aa14.28□□□□□ -0.12
PHRF1-202ENST00000413872 FABP5P3A8MUU1 101 aa14.28□□□□□ -0.12
PHRF1-202ENST00000413872 LHFPL1Q86WI0 220 aa14.28□□□□□ -0.12
PHRF1-202ENST00000413872 WDR83OSQ9Y284 106 aa14.28□□□□□ -0.12
PHRF1-202ENST00000413872 CIDEAO60543 219 aa14.27□□□□□ -0.12
PHRF1-202ENST00000413872 BTCP35070 178 aa14.27□□□□□ -0.12
PHRF1-202ENST00000413872 FAM71F2Q6NXP2 309 aa14.27□□□□□ -0.12
PHRF1-202ENST00000413872 PSMB11A5LHX3 300 aa14.27□□□□□ -0.13
PHRF1-202ENST00000413872 SELLP14151 372 aa14.27□□□□□ -0.13
PHRF1-202ENST00000413872 GATA2P23769 480 aaPredicted RBP14.27□□□□□ -0.13
PHRF1-202ENST00000413872 GATA3P23771 443 aa14.27□□□□□ -0.13
PHRF1-202ENST00000413872 PRB3Q04118 309 aaPredicted RBP14.27□□□□□ -0.13
PHRF1-202ENST00000413872 GAFA1Q96PS6 74 aa14.27□□□□□ -0.13
PHRF1-202ENST00000413872 CRIM1Q9NZV1 1036 aa14.27□□□□□ -0.13
PHRF1-202ENST00000413872 IGKV1D-8A0A087WSZ0 117 aa14.27□□□□□ -0.13
PHRF1-202ENST00000413872 SRP19P09132 144 aaKnown RBP14.27□□□□□ -0.13
PHRF1-202ENST00000413872 SPSB3Q6PJ21 355 aa14.27□□□□□ -0.13
PHRF1-202ENST00000413872 PIP4P1Q86T03 277 aa14.27□□□□□ -0.13
PHRF1-202ENST00000413872 OR4D5Q8NGN0 318 aa14.27□□□□□ -0.13
PHRF1-202ENST00000413872 IGHV3OR16-8A0A075B7F1 116 aa14.26□□□□□ -0.13
PHRF1-202ENST00000413872 PLAURQ03405 335 aa14.26□□□□□ -0.13
PHRF1-202ENST00000413872 SCO2A0A1W2PP80 73 aa14.26□□□□□ -0.13
PHRF1-202ENST00000413872 REC114Q7Z4M0 266 aa14.26□□□□□ -0.13
PHRF1-202ENST00000413872 LINC01356Q8N9X3 169 aa14.26□□□□□ -0.13
PHRF1-202ENST00000413872 ZNF383Q8NA42 475 aa14.26□□□□□ -0.13
PHRF1-202ENST00000413872 FER1L6-AS1Q8NA97 138 aa14.26□□□□□ -0.13
PHRF1-202ENST00000413872 TANC1Q9C0D5 1861 aa14.26□□□□□ -0.13
PHRF1-202ENST00000413872 RNF126Q9BV68 326 aa14.26□□□□□ -0.13
PHRF1-202ENST00000413872 CLDN16Q9Y5I7 305 aa14.26□□□□□ -0.13
PHRF1-202ENST00000413872 TMEM262E9PQX1 116 aa14.25□□□□□ -0.13
PHRF1-202ENST00000413872 PRELID3AQ96N28 172 aa14.25□□□□□ -0.13
PHRF1-202ENST00000413872 OVOL1O14753 267 aa14.25□□□□□ -0.13
PHRF1-202ENST00000413872 TMEM136Q6ZRR5 245 aa14.25□□□□□ -0.13
PHRF1-202ENST00000413872 Q6ZS49 121 aa14.25□□□□□ -0.13
PHRF1-202ENST00000413872 MBNL3Q9NUK0 354 aaKnown RBP14.25□□□□□ -0.13
PHRF1-202ENST00000413872 CARHSP1Q9Y2V2 147 aaKnown RBP14.25□□□□□ -0.13
PHRF1-202ENST00000413872 TRGV2A0A075B6R0 118 aa14.24□□□□□ -0.13
PHRF1-202ENST00000413872 RNASE4P34096 147 aaKnown RBP14.24□□□□□ -0.13
PHRF1-202ENST00000413872 ATP5G3P48201 142 aa14.24□□□□□ -0.13
PHRF1-202ENST00000413872 CCL20P78556 96 aa14.24□□□□□ -0.13
PHRF1-202ENST00000413872 MRPS16Q9Y3D3 137 aaKnown RBP14.24□□□□□ -0.13
PHRF1-202ENST00000413872 TICRRQ7Z2Z1 1910 aa14.24□□□□□ -0.13
PHRF1-202ENST00000413872 TRAV21A0A0B4J279 112 aa14.24□□□□□ -0.13
PHRF1-202ENST00000413872 GTSCR1Q86UQ5 136 aa14.24□□□□□ -0.13
PHRF1-202ENST00000413872 E7EQL1 145 aa14.24□□□□□ -0.13
PHRF1-202ENST00000413872 C5orf64Q2M2E5 130 aa14.24□□□□□ -0.13
PHRF1-202ENST00000413872 KIAA1644Q3SXP7 199 aa14.24□□□□□ -0.13
PHRF1-202ENST00000413872 Q6P435 159 aa14.24□□□□□ -0.13
PHRF1-202ENST00000413872 ALKBH7Q9BT30 221 aaPredicted RBP14.24□□□□□ -0.13
PHRF1-202ENST00000413872 H3BUX3 64 aa14.23□□□□□ -0.13
PHRF1-202ENST00000413872 MLNRO43193 412 aa14.23□□□□□ -0.13
PHRF1-202ENST00000413872 SP5Q6BEB4 398 aaPredicted RBP14.23□□□□□ -0.13
PHRF1-202ENST00000413872 MED12Q93074 2177 aa14.23□□□□□ -0.13
PHRF1-202ENST00000413872 ATP5LO75964 103 aa14.23□□□□□ -0.13
PHRF1-202ENST00000413872 CEACAM8P31997 349 aaPredicted RBP14.23□□□□□ -0.13
PHRF1-202ENST00000413872 MYO7BQ6PIF6 2116 aa14.23□□□□□ -0.13
PHRF1-202ENST00000413872 C12orf54Q6X4T0 127 aa14.23□□□□□ -0.13
PHRF1-202ENST00000413872 KLK15Q9H2R5 256 aa14.23□□□□□ -0.13
PHRF1-202ENST00000413872 LY6G6FQ5SQ64 297 aa14.23□□□□□ -0.13
PHRF1-202ENST00000413872 EPDR1Q9UM22 224 aa14.23□□□□□ -0.13
PHRF1-202ENST00000413872 DIDO1Q9BTC0 2240 aaKnown RBP14.23□□□□□ -0.13
PHRF1-202ENST00000413872 BUB1B-PAK6H3BSN5 160 aa14.23□□□□□ -0.13
PHRF1-202ENST00000413872 PSMG4Q5JS54 123 aa14.23□□□□□ -0.13
PHRF1-202ENST00000413872 PRTN3P24158 256 aa14.22□□□□□ -0.13
PHRF1-202ENST00000413872 MEIG1Q5JSS6 88 aa14.22□□□□□ -0.13
PHRF1-202ENST00000413872 SUMO2P61956 95 aaKnown RBP14.22□□□□□ -0.13
PHRF1-202ENST00000413872 USMG5Q96IX5 58 aa14.22□□□□□ -0.13
PHRF1-202ENST00000413872 ITGB1BP1O14713 200 aa14.22□□□□□ -0.13
PHRF1-202ENST00000413872 HGFACQ04756 655 aa14.22□□□□□ -0.13
PHRF1-202ENST00000413872 BIVMQ86UB2 503 aa14.22□□□□□ -0.13
PHRF1-202ENST00000413872 C2orf88Q9BSF0 95 aa14.22□□□□□ -0.13
PHRF1-202ENST00000413872 IGKV1D-17A0A075B6S4 117 aa14.21□□□□□ -0.13
PHRF1-202ENST00000413872 A0A087WWC5 75 aa14.21□□□□□ -0.13
PHRF1-202ENST00000413872 ASCL4Q6XD76 172 aa14.21□□□□□ -0.13
PHRF1-202ENST00000413872 PRSS33Q8NF86 280 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms