RNA–Protein interactions for RNA: ENST00000410016.5

HOXD3-202, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HOXD3, Length 2,384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-202ENST00000410016 VSTM2AQ8TAG5 236 aa12.83□□□□□ -0.36
HOXD3-202ENST00000410016 RNASE6Q93091 150 aaKnown RBP12.83□□□□□ -0.36
HOXD3-202ENST00000410016 MRPL32Q9BYC8 188 aaKnown RBP12.83□□□□□ -0.36
HOXD3-202ENST00000410016 RNASE7Q9H1E1 156 aaKnown RBP12.83□□□□□ -0.36
HOXD3-202ENST00000410016 ZNF430Q9H8G1 570 aaPredicted RBP12.83□□□□□ -0.36
HOXD3-202ENST00000410016 PKDREJQ9NTG1 2253 aa12.82□□□□□ -0.36
HOXD3-202ENST00000410016 A0A1W2PN81 502 aa12.82□□□□□ -0.36
HOXD3-202ENST00000410016 PPOXP50336 477 aa12.82□□□□□ -0.36
HOXD3-202ENST00000410016 COTL1Q14019 142 aa12.82□□□□□ -0.36
HOXD3-202ENST00000410016 MRGPRG-AS1Q2M3A8 158 aa12.82□□□□□ -0.36
HOXD3-202ENST00000410016 LRRC10Q5BKY1 277 aa12.82□□□□□ -0.36
HOXD3-202ENST00000410016 OR8I2Q8N0Y5 310 aa12.82□□□□□ -0.36
HOXD3-202ENST00000410016 OR1L6Q8NGR2 347 aa12.82□□□□□ -0.36
HOXD3-202ENST00000410016 RITA1Q96K30 269 aa12.82□□□□□ -0.36
HOXD3-202ENST00000410016 IGF2BP2-AS1Q96M15 143 aa12.82□□□□□ -0.36
HOXD3-202ENST00000410016 OSTCQ9NRP0 149 aa12.82□□□□□ -0.36
HOXD3-202ENST00000410016 IGKV1D-37A0A075B6S9 117 aa12.81□□□□□ -0.36
HOXD3-202ENST00000410016 ESDP10768 282 aa12.81□□□□□ -0.36
HOXD3-202ENST00000410016 IER3P46695 156 aa12.81□□□□□ -0.36
HOXD3-202ENST00000410016 C11orf42Q8N5U0 333 aa12.81□□□□□ -0.36
HOXD3-202ENST00000410016 ST6GALNAC3Q8NDV1 305 aa12.81□□□□□ -0.36
HOXD3-202ENST00000410016 SH3BGRL2Q9UJC5 107 aa12.81□□□□□ -0.36
HOXD3-202ENST00000410016 PIEZO2Q9H5I5 2752 aa12.81□□□□□ -0.36
HOXD3-202ENST00000410016 ISLRO14498 428 aa12.81□□□□□ -0.36
HOXD3-202ENST00000410016 CX3CL1P78423 397 aa12.81□□□□□ -0.36
HOXD3-202ENST00000410016 TIGITQ495A1 244 aa12.81□□□□□ -0.36
HOXD3-202ENST00000410016 PATE2Q6UY27 113 aa12.81□□□□□ -0.36
HOXD3-202ENST00000410016 MRPL36Q9P0J6 103 aaKnown RBP12.81□□□□□ -0.36
HOXD3-202ENST00000410016 KAAG1Q9UBP8 84 aa12.81□□□□□ -0.36
HOXD3-202ENST00000410016 ZNF835Q9Y2P0 537 aa12.81□□□□□ -0.36
HOXD3-202ENST00000410016 WASHC3Q9Y3C0 194 aa12.81□□□□□ -0.36
HOXD3-202ENST00000410016 TMEM238LA0A1B0GVL6 79 aa12.8□□□□□ -0.36
HOXD3-202ENST00000410016 FCN1O00602 326 aa12.8□□□□□ -0.36
HOXD3-202ENST00000410016 TCAPO15273 167 aa12.8□□□□□ -0.36
HOXD3-202ENST00000410016 FSTL3O95633 263 aa12.8□□□□□ -0.36
HOXD3-202ENST00000410016 TMEM155Q4W5P6 130 aa12.8□□□□□ -0.36
HOXD3-202ENST00000410016 NPIPB3Q92617 1050 aa12.8□□□□□ -0.36
HOXD3-202ENST00000410016 MS4A10Q96PG2 267 aa12.8□□□□□ -0.36
HOXD3-202ENST00000410016 GNB1LQ9BYB4 327 aa12.8□□□□□ -0.36
HOXD3-202ENST00000410016 SHISA9B4DS77 424 aa12.8□□□□□ -0.36
HOXD3-202ENST00000410016 IGHV3-48P01763 117 aa12.8□□□□□ -0.36
HOXD3-202ENST00000410016 CRISP2P16562 243 aa12.8□□□□□ -0.36
HOXD3-202ENST00000410016 GFRALQ6UXV0 394 aa12.8□□□□□ -0.36
HOXD3-202ENST00000410016 ASCL5Q7RTU5 278 aa12.8□□□□□ -0.36
HOXD3-202ENST00000410016 CMTM2Q8TAZ6 248 aa12.8□□□□□ -0.36
HOXD3-202ENST00000410016 RNF2Q99496 336 aa12.8□□□□□ -0.36
HOXD3-202ENST00000410016 NDUFAF3Q9BU61 184 aa12.8□□□□□ -0.36
HOXD3-202ENST00000410016 TPSG1Q9NRR2 321 aa12.8□□□□□ -0.36
HOXD3-202ENST00000410016 NAV3Q8IVL0 2385 aa12.79□□□□□ -0.36
HOXD3-202ENST00000410016 TRBV9A0A0B4J1U6 114 aa12.79□□□□□ -0.36
HOXD3-202ENST00000410016 SNURFLB1AK76 121 aa12.79□□□□□ -0.36
HOXD3-202ENST00000410016 SSX8Q7RTT4 187 aa12.79□□□□□ -0.36
HOXD3-202ENST00000410016 BEND2Q8NDZ0 799 aa12.79□□□□□ -0.36
HOXD3-202ENST00000410016 PRSS33Q8NF86 280 aa12.79□□□□□ -0.36
HOXD3-202ENST00000410016 OR5AU1Q8NGC0 362 aa12.79□□□□□ -0.36
HOXD3-202ENST00000410016 TCRBV4S1A1TA0A5B7 111 aa12.79□□□□□ -0.36
HOXD3-202ENST00000410016 E7EQL1 145 aa12.79□□□□□ -0.36
HOXD3-202ENST00000410016 UBE2L3P68036 154 aaKnown RBP12.79□□□□□ -0.36
HOXD3-202ENST00000410016 Q0VG73 95 aa12.79□□□□□ -0.36
HOXD3-202ENST00000410016 FXYD3Q14802 87 aa12.79□□□□□ -0.36
HOXD3-202ENST00000410016 TGIF2LXQ8IUE1 241 aa12.79□□□□□ -0.36
HOXD3-202ENST00000410016 THAP8Q8NA92 274 aa12.79□□□□□ -0.36
HOXD3-202ENST00000410016 LINC00479Q96M42 142 aa12.79□□□□□ -0.36
HOXD3-202ENST00000410016 ZNF355PQ9NSJ1 428 aa12.79□□□□□ -0.36
HOXD3-202ENST00000410016 A0A1W2PPI3 338 aa12.78□□□□□ -0.36
HOXD3-202ENST00000410016 SLC25A17O43808 307 aa12.78□□□□□ -0.36
HOXD3-202ENST00000410016 SERF1AO75920 110 aa12.78□□□□□ -0.36
HOXD3-202ENST00000410016 SCGB1D1O95968 90 aa12.78□□□□□ -0.36
HOXD3-202ENST00000410016 IGHV1-8P0DP01 117 aa12.78□□□□□ -0.36
HOXD3-202ENST00000410016 PYYP10082 97 aa12.78□□□□□ -0.36
HOXD3-202ENST00000410016 RUSC1-AS1Q66K80 236 aa12.78□□□□□ -0.36
HOXD3-202ENST00000410016 CDC42EP3Q9UKI2 254 aa12.78□□□□□ -0.36
HOXD3-202ENST00000410016 SSUH2Q9Y2M2 353 aa12.78□□□□□ -0.36
HOXD3-202ENST00000410016 F2Z2F3 143 aa12.78□□□□□ -0.36
HOXD3-202ENST00000410016 CD33P20138 364 aa12.78□□□□□ -0.36
HOXD3-202ENST00000410016 MC5RP33032 325 aa12.78□□□□□ -0.36
HOXD3-202ENST00000410016 SUB1P53999 127 aaKnown RBP eCLIP12.78□□□□□ -0.36
HOXD3-202ENST00000410016 PAFAH1B2P68402 229 aa12.78□□□□□ -0.36
HOXD3-202ENST00000410016 Q6ZWC4 215 aa12.78□□□□□ -0.36
HOXD3-202ENST00000410016 NAGKQ9UJ70 344 aa12.78□□□□□ -0.36
HOXD3-202ENST00000410016 POLR3KQ9Y2Y1 108 aaPredicted RBP12.78□□□□□ -0.36
HOXD3-202ENST00000410016 APC2O95996 2303 aa12.77□□□□□ -0.36
HOXD3-202ENST00000410016 SMIM27A0A1W2PRY6 76 aa12.77□□□□□ -0.36
HOXD3-202ENST00000410016 VSTM5A8MXK1 200 aa12.77□□□□□ -0.36
HOXD3-202ENST00000410016 PLXNB1O43157 2135 aa12.77□□□□□ -0.36
HOXD3-202ENST00000410016 COX7A2P2O60397 106 aa12.77□□□□□ -0.36
HOXD3-202ENST00000410016 IBA57Q5T440 356 aaKnown RBP12.77□□□□□ -0.36
HOXD3-202ENST00000410016 C10orf113Q5VZT2 155 aa12.77□□□□□ -0.36
HOXD3-202ENST00000410016 PVRIGQ6DKI7 326 aa12.77□□□□□ -0.36
HOXD3-202ENST00000410016 SPINK4O60575 86 aa12.77□□□□□ -0.37
HOXD3-202ENST00000410016 CASP6P55212 293 aa12.77□□□□□ -0.37
HOXD3-202ENST00000410016 TMEM136Q6ZRR5 245 aa12.77□□□□□ -0.37
HOXD3-202ENST00000410016 OR1L4Q8NGR5 311 aa12.77□□□□□ -0.37
HOXD3-202ENST00000410016 MISP3Q96FF7 219 aa12.77□□□□□ -0.37
HOXD3-202ENST00000410016 PAXXQ9BUH6 204 aa12.77□□□□□ -0.37
HOXD3-202ENST00000410016 IGLC7A0M8Q6 106 aa12.76□□□□□ -0.37
HOXD3-202ENST00000410016 REG1AP05451 166 aa12.76□□□□□ -0.37
HOXD3-202ENST00000410016 CRYGCP07315 174 aa12.76□□□□□ -0.37
HOXD3-202ENST00000410016 SNRPCP09234 159 aaKnown RBP12.76□□□□□ -0.37
HOXD3-202ENST00000410016 LGALS7P47929 136 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms