RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 CIB3Q96Q77 187 aaPredicted RBP8.31□□□□□ -1.08
CHMP3-205ENST00000409810 ZNF436Q9C0F3 470 aaPredicted RBP8.31□□□□□ -1.08
CHMP3-205ENST00000409810 UFC1Q9Y3C8 167 aa8.31□□□□□ -1.08
CHMP3-205ENST00000409810 WI2-2373I1.2A0A1W2PRP0 233 aa8.3□□□□□ -1.08
CHMP3-205ENST00000409810 F8W735 103 aaPredicted RBP8.3□□□□□ -1.08
CHMP3-205ENST00000409810 K7EIL1 84 aa8.3□□□□□ -1.08
CHMP3-205ENST00000409810 NDUFA4O00483 81 aa8.3□□□□□ -1.08
CHMP3-205ENST00000409810 IFNA10P01566 189 aa8.3□□□□□ -1.08
CHMP3-205ENST00000409810 SLC25A4P12235 298 aa8.3□□□□□ -1.08
CHMP3-205ENST00000409810 SPNP16150 400 aa8.3□□□□□ -1.08
CHMP3-205ENST00000409810 RPP30P78346 268 aaKnown RBP8.3□□□□□ -1.08
CHMP3-205ENST00000409810 IL34Q6ZMJ4 242 aa8.3□□□□□ -1.08
CHMP3-205ENST00000409810 MITD1Q8WV92 249 aa8.3□□□□□ -1.08
CHMP3-205ENST00000409810 TMEM190Q8WZ59 177 aa8.3□□□□□ -1.08
CHMP3-205ENST00000409810 PRR25Q96S07 402 aa8.3□□□□□ -1.08
CHMP3-205ENST00000409810 RBKSQ9H477 322 aa8.3□□□□□ -1.08
CHMP3-205ENST00000409810 TECRQ9NZ01 308 aaKnown RBP8.3□□□□□ -1.08
CHMP3-205ENST00000409810 TMEM213A2RRL7 107 aa8.29□□□□□ -1.08
CHMP3-205ENST00000409810 WRBO00258 174 aa8.29□□□□□ -1.08
CHMP3-205ENST00000409810 FOLR2P14207 255 aa8.29□□□□□ -1.08
CHMP3-205ENST00000409810 RAB11AP62491 216 aa8.29□□□□□ -1.08
CHMP3-205ENST00000409810 DEFB121Q5J5C9 76 aa8.29□□□□□ -1.08
CHMP3-205ENST00000409810 HAPLN4Q86UW8 402 aa8.29□□□□□ -1.08
CHMP3-205ENST00000409810 OR52B4Q8NGK2 314 aa8.29□□□□□ -1.08
CHMP3-205ENST00000409810 OR4X1Q8NH49 305 aa8.29□□□□□ -1.08
CHMP3-205ENST00000409810 ZNF431Q8TF32 576 aaPredicted RBP8.29□□□□□ -1.08
CHMP3-205ENST00000409810 CHRDL1Q9BU40 450 aa8.29□□□□□ -1.08
CHMP3-205ENST00000409810 DAZ1Q9NQZ3 744 aaKnown RBP8.29□□□□□ -1.08
CHMP3-205ENST00000409810 TRAV30A0A087WSZ9 112 aa8.28□□□□□ -1.08
CHMP3-205ENST00000409810 IGHV3-35A0A0C4DH35 117 aa8.28□□□□□ -1.08
CHMP3-205ENST00000409810 C15orf62A8K5M9 175 aa8.28□□□□□ -1.08
CHMP3-205ENST00000409810 SYNGR2O43760 224 aa8.28□□□□□ -1.08
CHMP3-205ENST00000409810 CLN5O75503 358 aa8.28□□□□□ -1.08
CHMP3-205ENST00000409810 ADAP1O75689 374 aa8.28□□□□□ -1.08
CHMP3-205ENST00000409810 IGHV3-48P01763 117 aa8.28□□□□□ -1.08
CHMP3-205ENST00000409810 IFNA4P05014 189 aa8.28□□□□□ -1.08
CHMP3-205ENST00000409810 CTSGP08311 255 aa8.28□□□□□ -1.08
CHMP3-205ENST00000409810 CBLN1P23435 193 aa8.28□□□□□ -1.08
CHMP3-205ENST00000409810 BMI1P35226 326 aa8.28□□□□□ -1.08
CHMP3-205ENST00000409810 ADMP35318 185 aa8.28□□□□□ -1.08
CHMP3-205ENST00000409810 NKX2-1P43699 371 aaPredicted RBP8.28□□□□□ -1.08
CHMP3-205ENST00000409810 UNQ9165/PRO28630Q6UXU0 137 aa8.28□□□□□ -1.08
CHMP3-205ENST00000409810 GINS3Q9BRX5 216 aa8.28□□□□□ -1.08
CHMP3-205ENST00000409810 C20orf24Q9BUV8 137 aa8.28□□□□□ -1.08
CHMP3-205ENST00000409810 FNDC4Q9H6D8 234 aaPredicted RBP8.28□□□□□ -1.08
CHMP3-205ENST00000409810 MRPL27Q9P0M9 148 aaKnown RBP8.28□□□□□ -1.08
CHMP3-205ENST00000409810 K7EMT4 169 aa8.27□□□□□ -1.09
CHMP3-205ENST00000409810 YIF1AO95070 293 aa8.27□□□□□ -1.09
CHMP3-205ENST00000409810 TMEM50AO95807 157 aa8.27□□□□□ -1.09
CHMP3-205ENST00000409810 IAPPP10997 89 aa8.27□□□□□ -1.09
CHMP3-205ENST00000409810 IAH1Q2TAA2 248 aaPredicted RBP8.27□□□□□ -1.09
CHMP3-205ENST00000409810 CD300EQ496F6 205 aaPredicted RBP8.27□□□□□ -1.09
CHMP3-205ENST00000409810 TM4SF20Q53R12 229 aa8.27□□□□□ -1.09
CHMP3-205ENST00000409810 ZNF600Q6ZNG1 722 aa8.27□□□□□ -1.09
CHMP3-205ENST00000409810 SLC16A13Q7RTY0 426 aa8.27□□□□□ -1.09
CHMP3-205ENST00000409810 GTSCR1Q86UQ5 136 aa8.27□□□□□ -1.09
CHMP3-205ENST00000409810 UXS1Q8NBZ7 420 aa8.27□□□□□ -1.09
CHMP3-205ENST00000409810 OR1S2Q8NGQ3 325 aa8.27□□□□□ -1.09
CHMP3-205ENST00000409810 GPN1Q9HCN4 374 aaPredicted RBP8.27□□□□□ -1.09
CHMP3-205ENST00000409810 PAIP2BQ9ULR5 123 aaKnown RBP8.27□□□□□ -1.09
CHMP3-205ENST00000409810 PRAF2O60831 178 aa8.26□□□□□ -1.09
CHMP3-205ENST00000409810 SCGB1D2O95969 90 aa8.26□□□□□ -1.09
CHMP3-205ENST00000409810 IL5P05113 134 aa8.26□□□□□ -1.09
CHMP3-205ENST00000409810 C8orf88P0DMB2 117 aa8.26□□□□□ -1.09
CHMP3-205ENST00000409810 RND2P52198 227 aa8.26□□□□□ -1.09
CHMP3-205ENST00000409810 IFITM3Q01628 133 aa8.26□□□□□ -1.09
CHMP3-205ENST00000409810 CD69Q07108 199 aa8.26□□□□□ -1.09
CHMP3-205ENST00000409810 DEFB114Q30KQ6 69 aa8.26□□□□□ -1.09
CHMP3-205ENST00000409810 C12orf45Q8N5I9 185 aaPredicted RBP8.26□□□□□ -1.09
CHMP3-205ENST00000409810 TMEM116Q8NCL8 245 aa8.26□□□□□ -1.09
CHMP3-205ENST00000409810 OR4D5Q8NGN0 318 aa8.26□□□□□ -1.09
CHMP3-205ENST00000409810 TMEM170AQ8WVE7 144 aa8.26□□□□□ -1.09
CHMP3-205ENST00000409810 CACNG8Q8WXS5 425 aa8.26□□□□□ -1.09
CHMP3-205ENST00000409810 SLC35E1Q96K37 410 aa8.26□□□□□ -1.09
CHMP3-205ENST00000409810 OR10C1Q96KK4 312 aa8.26□□□□□ -1.09
CHMP3-205ENST00000409810 SEC22CQ9BRL7 303 aa8.26□□□□□ -1.09
CHMP3-205ENST00000409810 MAGT1Q9H0U3 335 aa8.26□□□□□ -1.09
CHMP3-205ENST00000409810 SMAD5-AS1Q9Y6J3 95 aa8.26□□□□□ -1.09
CHMP3-205ENST00000409810 TRAV25A0A0B4J276 109 aa8.25□□□□□ -1.09
CHMP3-205ENST00000409810 C5orf51A6NDU8 294 aa8.25□□□□□ -1.09
CHMP3-205ENST00000409810 MPTX1A8MV57 137 aa8.25□□□□□ -1.09
CHMP3-205ENST00000409810 FAM25EA8MYX2 175 aa8.25□□□□□ -1.09
CHMP3-205ENST00000409810 OR10J1P30954 320 aa8.25□□□□□ -1.09
CHMP3-205ENST00000409810 GPX4P36969 197 aaPredicted RBP8.25□□□□□ -1.09
CHMP3-205ENST00000409810 ID3Q02535 119 aa8.25□□□□□ -1.09
CHMP3-205ENST00000409810 LAMTOR1Q6IAA8 161 aa8.25□□□□□ -1.09
CHMP3-205ENST00000409810 C11orf87Q6NUJ2 197 aa8.25□□□□□ -1.09
CHMP3-205ENST00000409810 PRSS54Q6PEW0 395 aa8.25□□□□□ -1.09
CHMP3-205ENST00000409810 BTNL8Q6UX41 500 aa8.25□□□□□ -1.09
CHMP3-205ENST00000409810 ADAMTSL5Q6ZMM2 481 aa8.25□□□□□ -1.09
CHMP3-205ENST00000409810 RBPMS2Q6ZRY4 209 aaKnown RBP8.25□□□□□ -1.09
CHMP3-205ENST00000409810 NRARPQ7Z6K4 114 aa8.25□□□□□ -1.09
CHMP3-205ENST00000409810 ZBTB8BQ8NAP8 495 aaPredicted RBP8.25□□□□□ -1.09
CHMP3-205ENST00000409810 GSKIPQ9P0R6 139 aa8.25□□□□□ -1.09
CHMP3-205ENST00000409810 MLXQ9UH92 298 aa8.25□□□□□ -1.09
CHMP3-205ENST00000409810 STRAPQ9Y3F4 350 aaKnown RBP8.25□□□□□ -1.09
CHMP3-205ENST00000409810 LSM4Q9Y4Z0 139 aaKnown RBP8.25□□□□□ -1.09
CHMP3-205ENST00000409810 PUS1Q9Y606 427 aaKnown RBP eCLIP8.25□□□□□ -1.09
CHMP3-205ENST00000409810 TRAV14DV4A0A0A6YYC5 116 aa8.24□□□□□ -1.09
CHMP3-205ENST00000409810 INMT-MINDY4F8WBC2 141 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms