RNA–Protein interactions for RNA: ENST00000409323.1

CHRNA1-204, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA1, Length 1,585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-204ENST00000409323 FXYD6-FXYD2A0A087WZ82 144 aa10.92□□□□□ -0.66
CHRNA1-204ENST00000409323 H3BUA1 57 aa10.92□□□□□ -0.66
CHRNA1-204ENST00000409323 ARPC5O15511 151 aa10.92□□□□□ -0.66
CHRNA1-204ENST00000409323 CLEC19AQ6UXS0 136 aa10.92□□□□□ -0.66
CHRNA1-204ENST00000409323 TMUB2Q71RG4 321 aa10.92□□□□□ -0.66
CHRNA1-204ENST00000409323 RNF152Q8N8N0 203 aa10.92□□□□□ -0.66
CHRNA1-204ENST00000409323 MYOZ3Q8TDC0 251 aa10.92□□□□□ -0.66
CHRNA1-204ENST00000409323 CCDC140Q96MF4 163 aa10.92□□□□□ -0.66
CHRNA1-204ENST00000409323 AQP10Q96PS8 301 aa10.92□□□□□ -0.66
CHRNA1-204ENST00000409323 FAM223BA6NKX1 122 aa10.91□□□□□ -0.66
CHRNA1-204ENST00000409323 PMS2P5A8MQ11 134 aa10.91□□□□□ -0.66
CHRNA1-204ENST00000409323 ADARB2-AS1A8MUL3 147 aa10.91□□□□□ -0.66
CHRNA1-204ENST00000409323 E5RGE8 158 aa10.91□□□□□ -0.66
CHRNA1-204ENST00000409323 PPP5D1E7EU14 171 aa10.91□□□□□ -0.66
CHRNA1-204ENST00000409323 TSC22D2O75157 780 aa10.91□□□□□ -0.66
CHRNA1-204ENST00000409323 HIST1H1BP16401 226 aaKnown RBP10.91□□□□□ -0.66
CHRNA1-204ENST00000409323 RAB11AP62491 216 aa10.91□□□□□ -0.66
CHRNA1-204ENST00000409323 NHLH2Q02577 135 aa10.91□□□□□ -0.66
CHRNA1-204ENST00000409323 OPCMLQ14982 345 aa10.91□□□□□ -0.66
CHRNA1-204ENST00000409323 ACSM6Q6P461 480 aa10.91□□□□□ -0.66
CHRNA1-204ENST00000409323 TMEM14EPQ6UXP3 125 aa10.91□□□□□ -0.66
CHRNA1-204ENST00000409323 FAM223AQ8IWN6 122 aa10.91□□□□□ -0.66
CHRNA1-204ENST00000409323 TMEM252Q8N6L7 170 aa10.91□□□□□ -0.66
CHRNA1-204ENST00000409323 CITED1Q99966 193 aa10.91□□□□□ -0.66
CHRNA1-204ENST00000409323 LYRM2Q9NU23 88 aaPredicted RBP10.91□□□□□ -0.66
CHRNA1-204ENST00000409323 THYN1Q9P016 225 aa10.91□□□□□ -0.66
CHRNA1-204ENST00000409323 TSSC4Q9Y5U2 329 aaPredicted RBP10.91□□□□□ -0.66
CHRNA1-204ENST00000409323 STAB1Q9NY15 2570 aa10.91□□□□□ -0.66
CHRNA1-204ENST00000409323 IGHV3-35A0A0C4DH35 117 aa10.9□□□□□ -0.66
CHRNA1-204ENST00000409323 OR2T8A6NH00 312 aa10.9□□□□□ -0.66
CHRNA1-204ENST00000409323 CYB5BO43169 146 aa10.9□□□□□ -0.66
CHRNA1-204ENST00000409323 GPR183P32249 361 aa10.9□□□□□ -0.66
CHRNA1-204ENST00000409323 TAS2R30P59541 319 aa10.9□□□□□ -0.66
CHRNA1-204ENST00000409323 RPP30P78346 268 aaKnown RBP10.9□□□□□ -0.66
CHRNA1-204ENST00000409323 PVRIGQ6DKI7 326 aa10.9□□□□□ -0.66
CHRNA1-204ENST00000409323 SLC16A13Q7RTY0 426 aa10.9□□□□□ -0.66
CHRNA1-204ENST00000409323 OR1L6Q8NGR2 347 aa10.9□□□□□ -0.66
CHRNA1-204ENST00000409323 ACY3Q96HD9 319 aa10.9□□□□□ -0.66
CHRNA1-204ENST00000409323 UBE2E2Q96LR5 201 aa10.9□□□□□ -0.66
CHRNA1-204ENST00000409323 WNK1Q9H4A3 2382 aa10.9□□□□□ -0.66
CHRNA1-204ENST00000409323 SMCO3A2RU48 225 aa10.9□□□□□ -0.67
CHRNA1-204ENST00000409323 PRSS46E5RG02 174 aa10.9□□□□□ -0.67
CHRNA1-204ENST00000409323 RND2P52198 227 aa10.9□□□□□ -0.67
CHRNA1-204ENST00000409323 AP2S1P53680 142 aaPredicted RBP10.9□□□□□ -0.67
CHRNA1-204ENST00000409323 Q56UQ5 140 aa10.9□□□□□ -0.67
CHRNA1-204ENST00000409323 TEX261Q6UWH6 196 aa10.9□□□□□ -0.67
CHRNA1-204ENST00000409323 INO80EQ8NBZ0 244 aaPredicted RBP10.9□□□□□ -0.67
CHRNA1-204ENST00000409323 ZNF502Q8TBZ5 544 aa10.9□□□□□ -0.67
CHRNA1-204ENST00000409323 EEF1AKMT3Q96AZ1 226 aa10.9□□□□□ -0.67
CHRNA1-204ENST00000409323 USMG5Q96IX5 58 aa10.9□□□□□ -0.67
CHRNA1-204ENST00000409323 ZNF747Q9BV97 191 aa10.9□□□□□ -0.67
CHRNA1-204ENST00000409323 SMIM3Q9BZL3 60 aa10.9□□□□□ -0.67
CHRNA1-204ENST00000409323 C21orf62Q9NYP8 219 aa10.9□□□□□ -0.67
CHRNA1-204ENST00000409323 IGHV4OR15-8A0A075B7B6 117 aa10.89□□□□□ -0.67
CHRNA1-204ENST00000409323 A0A087WW49 117 aa10.89□□□□□ -0.67
CHRNA1-204ENST00000409323 A0A0G2JLM5 398 aa10.89□□□□□ -0.67
CHRNA1-204ENST00000409323 F8W735 103 aaPredicted RBP10.89□□□□□ -0.67
CHRNA1-204ENST00000409323 CLEC3BP05452 202 aa10.89□□□□□ -0.67
CHRNA1-204ENST00000409323 LGALS1P09382 135 aaKnown RBP10.89□□□□□ -0.67
CHRNA1-204ENST00000409323 P2RY1P47900 373 aa10.89□□□□□ -0.67
CHRNA1-204ENST00000409323 CDX1P47902 265 aaPredicted RBP10.89□□□□□ -0.67
CHRNA1-204ENST00000409323 EWSR1Q01844 656 aaKnown RBP eCLIP10.89□□□□□ -0.67
CHRNA1-204ENST00000409323 CD69Q07108 199 aa10.89□□□□□ -0.67
CHRNA1-204ENST00000409323 ZNF767PQ75MW2 155 aa10.89□□□□□ -0.67
CHRNA1-204ENST00000409323 OR10P1Q8NGE3 313 aa10.89□□□□□ -0.67
CHRNA1-204ENST00000409323 RNASEH2CQ8TDP1 164 aaKnown RBP10.89□□□□□ -0.67
CHRNA1-204ENST00000409323 I3L521 148 aa10.88□□□□□ -0.67
CHRNA1-204ENST00000409323 CORTO00230 105 aa10.88□□□□□ -0.67
CHRNA1-204ENST00000409323 BRI3O95415 125 aa10.88□□□□□ -0.67
CHRNA1-204ENST00000409323 RPL12P30050 165 aaKnown RBP10.88□□□□□ -0.67
CHRNA1-204ENST00000409323 GAMTQ14353 236 aa10.88□□□□□ -0.67
CHRNA1-204ENST00000409323 CLINT1Q14677 625 aa10.88□□□□□ -0.67
CHRNA1-204ENST00000409323 KLK9Q2XQG4 91 aa10.88□□□□□ -0.67
CHRNA1-204ENST00000409323 ZNF343Q6P1L6 599 aa10.88□□□□□ -0.67
CHRNA1-204ENST00000409323 NDUFA11Q86Y39 141 aa10.88□□□□□ -0.67
CHRNA1-204ENST00000409323 C4orf3Q8WVX3 66 aa10.88□□□□□ -0.67
CHRNA1-204ENST00000409323 NPIPB3Q92617 1050 aa10.88□□□□□ -0.67
CHRNA1-204ENST00000409323 CXorf58Q96LI9 332 aa10.88□□□□□ -0.67
CHRNA1-204ENST00000409323 ARL6Q9H0F7 186 aa10.88□□□□□ -0.67
CHRNA1-204ENST00000409323 KLK9Q9UKQ9 250 aa10.88□□□□□ -0.67
CHRNA1-204ENST00000409323 IGHV3OR16-8A0A075B7F1 116 aa10.87□□□□□ -0.67
CHRNA1-204ENST00000409323 SULT1A1P50225 295 aa10.87□□□□□ -0.67
CHRNA1-204ENST00000409323 SLC38A11Q08AI6 406 aa10.87□□□□□ -0.67
CHRNA1-204ENST00000409323 SLC51BQ86UW2 128 aa10.87□□□□□ -0.67
CHRNA1-204ENST00000409323 STX12Q86Y82 276 aa10.87□□□□□ -0.67
CHRNA1-204ENST00000409323 ZNF680Q8NEM1 530 aa10.87□□□□□ -0.67
CHRNA1-204ENST00000409323 OR11H1Q8NG94 326 aa10.87□□□□□ -0.67
CHRNA1-204ENST00000409323 VN1R17PQ8TDU5 208 aa10.87□□□□□ -0.67
CHRNA1-204ENST00000409323 RAX2Q96IS3 184 aa10.87□□□□□ -0.67
CHRNA1-204ENST00000409323 CHRDL1Q9BU40 450 aa10.87□□□□□ -0.67
CHRNA1-204ENST00000409323 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.86□□□□□ -0.67
CHRNA1-204ENST00000409323 RPS10-NUDT3A0A1W2PQS6 291 aa10.86□□□□□ -0.67
CHRNA1-204ENST00000409323 BMPR1BO00238 502 aa10.86□□□□□ -0.67
CHRNA1-204ENST00000409323 GNG7O60262 68 aa10.86□□□□□ -0.67
CHRNA1-204ENST00000409323 LY86O95711 162 aa10.86□□□□□ -0.67
CHRNA1-204ENST00000409323 ARL3P36405 182 aa10.86□□□□□ -0.67
CHRNA1-204ENST00000409323 SLURP1P55000 103 aa10.86□□□□□ -0.67
CHRNA1-204ENST00000409323 MFAP4P55083 255 aa10.86□□□□□ -0.67
CHRNA1-204ENST00000409323 AKR1C1Q04828 323 aa10.86□□□□□ -0.67
CHRNA1-204ENST00000409323 LILRB2Q8N423 598 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms