RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 PEF1Q9UBV8 284 aaKnown RBP12.27□□□□□ -0.44
HMGA1-204ENST00000401473 NBEAL1Q6ZS30 2694 aa12.27□□□□□ -0.45
HMGA1-204ENST00000401473 TRAV14DV4A0A0A6YYC5 116 aa12.27□□□□□ -0.45
HMGA1-204ENST00000401473 PPP5D1E7EU14 171 aa12.27□□□□□ -0.45
HMGA1-204ENST00000401473 L7N2F9 121 aa12.27□□□□□ -0.45
HMGA1-204ENST00000401473 GIPP09681 153 aaPredicted RBP12.27□□□□□ -0.45
HMGA1-204ENST00000401473 RAB11AP62491 216 aa12.27□□□□□ -0.45
HMGA1-204ENST00000401473 VAMP2P63027 116 aa12.27□□□□□ -0.45
HMGA1-204ENST00000401473 RPP30P78346 268 aaKnown RBP12.27□□□□□ -0.45
HMGA1-204ENST00000401473 ARL16Q0P5N6 197 aa12.27□□□□□ -0.45
HMGA1-204ENST00000401473 OR2T8A6NH00 312 aa12.26□□□□□ -0.45
HMGA1-204ENST00000401473 RLN2P04090 185 aa12.26□□□□□ -0.45
HMGA1-204ENST00000401473 HSPB1P04792 205 aaKnown RBP12.26□□□□□ -0.45
HMGA1-204ENST00000401473 OR8U8P0C7N1 319 aa12.26□□□□□ -0.45
HMGA1-204ENST00000401473 CD69Q07108 199 aa12.26□□□□□ -0.45
HMGA1-204ENST00000401473 PRSS54Q6PEW0 395 aa12.26□□□□□ -0.45
HMGA1-204ENST00000401473 HAPLN4Q86UW8 402 aa12.26□□□□□ -0.45
HMGA1-204ENST00000401473 UBAC2Q8NBM4 344 aa12.26□□□□□ -0.45
HMGA1-204ENST00000401473 OR1N2Q8NGR9 330 aa12.26□□□□□ -0.45
HMGA1-204ENST00000401473 RANGRFQ9HD47 186 aaPredicted RBP12.26□□□□□ -0.45
HMGA1-204ENST00000401473 LYRM2Q9NU23 88 aaPredicted RBP12.26□□□□□ -0.45
HMGA1-204ENST00000401473 G3V3Q6 166 aa12.25□□□□□ -0.45
HMGA1-204ENST00000401473 BMPR1BO00238 502 aa12.25□□□□□ -0.45
HMGA1-204ENST00000401473 CTSGP08311 255 aa12.25□□□□□ -0.45
HMGA1-204ENST00000401473 PVALBP20472 110 aaPredicted RBP12.25□□□□□ -0.45
HMGA1-204ENST00000401473 GPR183P32249 361 aa12.25□□□□□ -0.45
HMGA1-204ENST00000401473 CAV2P51636 162 aa12.25□□□□□ -0.45
HMGA1-204ENST00000401473 FHL3Q13643 280 aa12.25□□□□□ -0.45
HMGA1-204ENST00000401473 OR8G2PQ6IF36 304 aa12.25□□□□□ -0.45
HMGA1-204ENST00000401473 TMEM252Q8N6L7 170 aa12.25□□□□□ -0.45
HMGA1-204ENST00000401473 E5RGE8 158 aa12.25□□□□□ -0.45
HMGA1-204ENST00000401473 M0QZ24 198 aa12.25□□□□□ -0.45
HMGA1-204ENST00000401473 FCGR2BP31994 310 aaPredicted RBP12.25□□□□□ -0.45
HMGA1-204ENST00000401473 ADMP35318 185 aa12.25□□□□□ -0.45
HMGA1-204ENST00000401473 BCAP31P51572 246 aa12.25□□□□□ -0.45
HMGA1-204ENST00000401473 MFAP4P55083 255 aa12.25□□□□□ -0.45
HMGA1-204ENST00000401473 RAP2BP61225 183 aa12.25□□□□□ -0.45
HMGA1-204ENST00000401473 ZNF616Q08AN1 781 aa12.25□□□□□ -0.45
HMGA1-204ENST00000401473 GAMTQ14353 236 aa12.25□□□□□ -0.45
HMGA1-204ENST00000401473 TMEM116Q8NCL8 245 aa12.25□□□□□ -0.45
HMGA1-204ENST00000401473 OR4F17Q8NGA8 305 aa12.25□□□□□ -0.45
HMGA1-204ENST00000401473 OR4F4Q96R69 305 aa12.25□□□□□ -0.45
HMGA1-204ENST00000401473 CHRDL1Q9BU40 450 aa12.25□□□□□ -0.45
HMGA1-204ENST00000401473 IGSF23A1L1A6 192 aa12.24□□□□□ -0.45
HMGA1-204ENST00000401473 CST7O76096 145 aa12.24□□□□□ -0.45
HMGA1-204ENST00000401473 ACSM6Q6P461 480 aa12.24□□□□□ -0.45
HMGA1-204ENST00000401473 OR2T35Q8NGX2 323 aa12.24□□□□□ -0.45
HMGA1-204ENST00000401473 OR4X1Q8NH49 305 aa12.24□□□□□ -0.45
HMGA1-204ENST00000401473 ZNF414Q96IQ9 312 aa12.24□□□□□ -0.45
HMGA1-204ENST00000401473 MBD2Q9UBB5 411 aa12.24□□□□□ -0.45
HMGA1-204ENST00000401473 NOTCH1P46531 2555 aa12.24□□□□□ -0.45
HMGA1-204ENST00000401473 IGHV3-35A0A0C4DH35 117 aa12.23□□□□□ -0.45
HMGA1-204ENST00000401473 LINC01619G3V211 115 aa12.23□□□□□ -0.45
HMGA1-204ENST00000401473 OR2C1O95371 312 aa12.23□□□□□ -0.45
HMGA1-204ENST00000401473 LYL1P12980 280 aa12.23□□□□□ -0.45
HMGA1-204ENST00000401473 GPX4P36969 197 aaPredicted RBP12.23□□□□□ -0.45
HMGA1-204ENST00000401473 SLURP1P55000 103 aa12.23□□□□□ -0.45
HMGA1-204ENST00000401473 NHLH2Q02577 135 aa12.23□□□□□ -0.45
HMGA1-204ENST00000401473 Q56UQ5 140 aa12.23□□□□□ -0.45
HMGA1-204ENST00000401473 ASB13Q8WXK3 278 aa12.23□□□□□ -0.45
HMGA1-204ENST00000401473 CACNG8Q8WXS5 425 aa12.23□□□□□ -0.45
HMGA1-204ENST00000401473 NPIPB3Q92617 1050 aa12.23□□□□□ -0.45
HMGA1-204ENST00000401473 TXN2Q99757 166 aa12.23□□□□□ -0.45
HMGA1-204ENST00000401473 SMLR1H3BR10 107 aa12.23□□□□□ -0.45
HMGA1-204ENST00000401473 HOXD3P31249 432 aaPredicted RBP12.23□□□□□ -0.45
HMGA1-204ENST00000401473 ARL3P36405 182 aa12.23□□□□□ -0.45
HMGA1-204ENST00000401473 MYCNOSP40205 109 aa12.23□□□□□ -0.45
HMGA1-204ENST00000401473 P2RY1P47900 373 aa12.23□□□□□ -0.45
HMGA1-204ENST00000401473 RND2P52198 227 aa12.23□□□□□ -0.45
HMGA1-204ENST00000401473 SLC16A13Q7RTY0 426 aa12.23□□□□□ -0.45
HMGA1-204ENST00000401473 OR10P1Q8NGE3 313 aa12.23□□□□□ -0.45
HMGA1-204ENST00000401473 DPF1Q92782 380 aa12.23□□□□□ -0.45
HMGA1-204ENST00000401473 DLX4Q92988 240 aaPredicted RBP12.23□□□□□ -0.45
HMGA1-204ENST00000401473 IGKV1OR2-108A0A075B7D4 117 aa12.22□□□□□ -0.45
HMGA1-204ENST00000401473 RPS10-NUDT3A0A1W2PQS6 291 aa12.22□□□□□ -0.45
HMGA1-204ENST00000401473 TGOLN2O43493 480 aa12.22□□□□□ -0.45
HMGA1-204ENST00000401473 CLN5O75503 358 aa12.22□□□□□ -0.45
HMGA1-204ENST00000401473 PET100P0DJ07 73 aa12.22□□□□□ -0.45
HMGA1-204ENST00000401473 NPBWR1P48145 328 aa12.22□□□□□ -0.45
HMGA1-204ENST00000401473 PRR31Q5SQ13 230 aa12.22□□□□□ -0.45
HMGA1-204ENST00000401473 ETFRF1Q6IPR1 90 aa12.22□□□□□ -0.45
HMGA1-204ENST00000401473 ACOT7LQ6ZUV0 252 aa12.22□□□□□ -0.45
HMGA1-204ENST00000401473 TMEM217Q8N7C4 229 aa12.22□□□□□ -0.45
HMGA1-204ENST00000401473 BSCL2Q96G97 398 aaPredicted RBP12.22□□□□□ -0.45
HMGA1-204ENST00000401473 ACY3Q96HD9 319 aa12.22□□□□□ -0.45
HMGA1-204ENST00000401473 ST6GAL2Q96JF0 529 aa12.22□□□□□ -0.45
HMGA1-204ENST00000401473 ATP6V0BQ99437 205 aa12.22□□□□□ -0.45
HMGA1-204ENST00000401473 GNG7O60262 68 aa12.21□□□□□ -0.45
HMGA1-204ENST00000401473 IGKV1-17P01599 117 aa12.21□□□□□ -0.45
HMGA1-204ENST00000401473 SLC25A4P12235 298 aa12.21□□□□□ -0.45
HMGA1-204ENST00000401473 KLF5Q13887 457 aaPredicted RBP12.21□□□□□ -0.45
HMGA1-204ENST00000401473 LINC00482Q8N8I6 264 aa12.21□□□□□ -0.45
HMGA1-204ENST00000401473 GGCTO75223 188 aaKnown RBP12.21□□□□□ -0.46
HMGA1-204ENST00000401473 PF4P02776 101 aa12.21□□□□□ -0.46
HMGA1-204ENST00000401473 IGLC1P0CG04 106 aa12.21□□□□□ -0.46
HMGA1-204ENST00000401473 SULT1A1P50225 295 aa12.21□□□□□ -0.46
HMGA1-204ENST00000401473 FGL1Q08830 312 aa12.21□□□□□ -0.46
HMGA1-204ENST00000401473 FAM209BQ5JX69 171 aa12.21□□□□□ -0.46
HMGA1-204ENST00000401473 THAP6Q8TBB0 222 aa12.21□□□□□ -0.46
HMGA1-204ENST00000401473 DCUN1D4Q92564 292 aa12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms