RNA–Protein interactions for RNA: ENST00000400555.7

PPP4R1-202, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-202ENST00000400555 PPIAL4FP0DN26 164 aa10.33□□□□□ -0.76
PPP4R1-202ENST00000400555 PAXXQ9BUH6 204 aa10.33□□□□□ -0.76
PPP4R1-202ENST00000400555 DNAJC4Q9NNZ3 241 aa10.33□□□□□ -0.76
PPP4R1-202ENST00000400555 POLR3KQ9Y2Y1 108 aaPredicted RBP10.33□□□□□ -0.76
PPP4R1-202ENST00000400555 PPIAL4AQ9Y536 164 aa10.33□□□□□ -0.76
PPP4R1-202ENST00000400555 WNT2P09544 360 aa10.33□□□□□ -0.76
PPP4R1-202ENST00000400555 GAL3ST2Q9H3Q3 398 aa10.33□□□□□ -0.76
PPP4R1-202ENST00000400555 GNB4Q9HAV0 340 aa10.33□□□□□ -0.76
PPP4R1-202ENST00000400555 TPSG1Q9NRR2 321 aa10.33□□□□□ -0.76
PPP4R1-202ENST00000400555 AMMECR1Q9Y4X0 333 aaPredicted RBP10.33□□□□□ -0.76
PPP4R1-202ENST00000400555 GGTLC3B5MD39 225 aa10.32□□□□□ -0.76
PPP4R1-202ENST00000400555 M0R143 59 aa10.32□□□□□ -0.76
PPP4R1-202ENST00000400555 FOXA3P55318 350 aaPredicted RBP10.32□□□□□ -0.76
PPP4R1-202ENST00000400555 RPL15P61313 204 aaKnown RBP10.32□□□□□ -0.76
PPP4R1-202ENST00000400555 FOXL1Q12952 345 aa10.32□□□□□ -0.76
PPP4R1-202ENST00000400555 LRRC10Q5BKY1 277 aa10.32□□□□□ -0.76
PPP4R1-202ENST00000400555 TMEM144Q7Z5S9 345 aa10.32□□□□□ -0.76
PPP4R1-202ENST00000400555 FAM168AQ92567 244 aa10.32□□□□□ -0.76
PPP4R1-202ENST00000400555 NOL4LQ96MY1 436 aaPredicted RBP10.32□□□□□ -0.76
PPP4R1-202ENST00000400555 RPUSD1Q9UJJ7 312 aaKnown RBP10.32□□□□□ -0.76
PPP4R1-202ENST00000400555 DIRC3C9JPN6 131 aa10.32□□□□□ -0.76
PPP4R1-202ENST00000400555 CNIH1O95406 144 aa10.32□□□□□ -0.76
PPP4R1-202ENST00000400555 TFPI2P48307 235 aa10.32□□□□□ -0.76
PPP4R1-202ENST00000400555 OR5B3Q8NH48 314 aa10.32□□□□□ -0.76
PPP4R1-202ENST00000400555 TMEM14BQ9NUH8 114 aa10.32□□□□□ -0.76
PPP4R1-202ENST00000400555 ZNF292O60281 2723 aa10.32□□□□□ -0.76
PPP4R1-202ENST00000400555 PGPA6NDG6 321 aa10.32□□□□□ -0.76
PPP4R1-202ENST00000400555 HSBP1O75506 76 aa10.32□□□□□ -0.76
PPP4R1-202ENST00000400555 RBP4P02753 201 aa10.32□□□□□ -0.76
PPP4R1-202ENST00000400555 BORCS7Q96B45 105 aa10.32□□□□□ -0.76
PPP4R1-202ENST00000400555 C1orf159Q96HA4 380 aa10.32□□□□□ -0.76
PPP4R1-202ENST00000400555 TMEM106BQ9NUM4 274 aa10.32□□□□□ -0.76
PPP4R1-202ENST00000400555 TBL2Q9Y4P3 447 aaKnown RBP10.32□□□□□ -0.76
PPP4R1-202ENST00000400555 Q6ZWC4 215 aa10.31□□□□□ -0.76
PPP4R1-202ENST00000400555 OR52E5Q8NH55 327 aa10.31□□□□□ -0.76
PPP4R1-202ENST00000400555 RAB1CQ92928 201 aa10.31□□□□□ -0.76
PPP4R1-202ENST00000400555 FOXA2Q9Y261 457 aaPredicted RBP10.31□□□□□ -0.76
PPP4R1-202ENST00000400555 VSTM5A8MXK1 200 aa10.31□□□□□ -0.76
PPP4R1-202ENST00000400555 CSN3P07498 182 aa10.31□□□□□ -0.76
PPP4R1-202ENST00000400555 LYZP61626 148 aa10.31□□□□□ -0.76
PPP4R1-202ENST00000400555 PRCDQ00LT1 54 aa10.31□□□□□ -0.76
PPP4R1-202ENST00000400555 TMEM200BQ69YZ2 307 aa10.31□□□□□ -0.76
PPP4R1-202ENST00000400555 ZNF439Q8NDP4 499 aa10.31□□□□□ -0.76
PPP4R1-202ENST00000400555 TRGV8A0A0C4DH27 118 aa10.31□□□□□ -0.76
PPP4R1-202ENST00000400555 TAS2R60P59551 318 aa10.31□□□□□ -0.76
PPP4R1-202ENST00000400555 LCN12Q6JVE5 192 aa10.31□□□□□ -0.76
PPP4R1-202ENST00000400555 SNHG12Q9BXW3 62 aa10.31□□□□□ -0.76
PPP4R1-202ENST00000400555 LSM4Q9Y4Z0 139 aaKnown RBP10.31□□□□□ -0.76
PPP4R1-202ENST00000400555 LY6HO94772 140 aa10.3□□□□□ -0.76
PPP4R1-202ENST00000400555 HES1Q14469 280 aa10.3□□□□□ -0.76
PPP4R1-202ENST00000400555 LINC00305Q7Z4B0 112 aa10.3□□□□□ -0.76
PPP4R1-202ENST00000400555 ABHD17AQ96GS6 310 aa10.3□□□□□ -0.76
PPP4R1-202ENST00000400555 Q56UQ5 140 aa10.3□□□□□ -0.76
PPP4R1-202ENST00000400555 DAZAP1Q96EP5 407 aaKnown RBP10.3□□□□□ -0.76
PPP4R1-202ENST00000400555 RITA1Q96K30 269 aa10.3□□□□□ -0.76
PPP4R1-202ENST00000400555 ZNF430Q9H8G1 570 aaPredicted RBP10.3□□□□□ -0.76
PPP4R1-202ENST00000400555 MBD3L4A6NDZ8 208 aaPredicted RBP10.3□□□□□ -0.76
PPP4R1-202ENST00000400555 MBD3L3A6NE82 208 aaPredicted RBP10.3□□□□□ -0.76
PPP4R1-202ENST00000400555 DPRXA6NFQ7 191 aa10.3□□□□□ -0.76
PPP4R1-202ENST00000400555 MBD3L5A6NJ08 208 aaPredicted RBP10.3□□□□□ -0.76
PPP4R1-202ENST00000400555 MKRN2OSH3BPM6 223 aa10.3□□□□□ -0.76
PPP4R1-202ENST00000400555 APCSP02743 223 aa10.3□□□□□ -0.76
PPP4R1-202ENST00000400555 RNASE2P10153 161 aaKnown RBP10.3□□□□□ -0.76
PPP4R1-202ENST00000400555 SUB1P53999 127 aaKnown RBP eCLIP10.3□□□□□ -0.76
PPP4R1-202ENST00000400555 CD69Q07108 199 aa10.3□□□□□ -0.76
PPP4R1-202ENST00000400555 ZNF788Q6ZQV5 615 aa10.3□□□□□ -0.76
PPP4R1-202ENST00000400555 MBD3L2Q8NHZ7 208 aaPredicted RBP10.3□□□□□ -0.76
PPP4R1-202ENST00000400555 C22orf15Q8WYQ4 148 aa10.3□□□□□ -0.76
PPP4R1-202ENST00000400555 FAM90A27PA6NNH2 459 aa10.29□□□□□ -0.76
PPP4R1-202ENST00000400555 M0QZ24 198 aa10.29□□□□□ -0.76
PPP4R1-202ENST00000400555 CRYABP02511 175 aaKnown RBP10.29□□□□□ -0.76
PPP4R1-202ENST00000400555 CNTFRP26992 372 aa10.29□□□□□ -0.76
PPP4R1-202ENST00000400555 PRR30Q53SZ7 412 aaPredicted RBP10.29□□□□□ -0.76
PPP4R1-202ENST00000400555 DDB2Q92466 427 aa10.29□□□□□ -0.76
PPP4R1-202ENST00000400555 RCHY1Q96PM5 261 aa10.29□□□□□ -0.76
PPP4R1-202ENST00000400555 TNFRSF19Q9NS68 423 aa10.29□□□□□ -0.76
PPP4R1-202ENST00000400555 BRS3P32247 399 aa10.29□□□□□ -0.76
PPP4R1-202ENST00000400555 TCTAP57738 103 aa10.29□□□□□ -0.76
PPP4R1-202ENST00000400555 GUSBP1Q15486 140 aa10.29□□□□□ -0.76
PPP4R1-202ENST00000400555 PMCHL1Q16048 86 aa10.29□□□□□ -0.76
PPP4R1-202ENST00000400555 TCF24Q7RTU0 167 aa10.29□□□□□ -0.76
PPP4R1-202ENST00000400555 DIRC2Q96SL1 478 aa10.29□□□□□ -0.76
PPP4R1-202ENST00000400555 C17orf100A8MU93 164 aa10.29□□□□□ -0.76
PPP4R1-202ENST00000400555 CORTO00230 105 aa10.29□□□□□ -0.76
PPP4R1-202ENST00000400555 DLL1O00548 723 aa10.29□□□□□ -0.76
PPP4R1-202ENST00000400555 ISLRO14498 428 aa10.29□□□□□ -0.76
PPP4R1-202ENST00000400555 TYMSP04818 313 aa10.29□□□□□ -0.76
PPP4R1-202ENST00000400555 CD99P14209 185 aa10.29□□□□□ -0.76
PPP4R1-202ENST00000400555 VMA21Q3ZAQ7 101 aa10.29□□□□□ -0.76
PPP4R1-202ENST00000400555 PDPNQ86YL7 162 aa10.29□□□□□ -0.76
PPP4R1-202ENST00000400555 SLC25A33Q9BSK2 321 aa10.29□□□□□ -0.76
PPP4R1-202ENST00000400555 LRBAP50851 2863 aa10.28□□□□□ -0.76
PPP4R1-202ENST00000400555 A0A1W2PN81 502 aa10.28□□□□□ -0.76
PPP4R1-202ENST00000400555 TMEM183BQ1AE95 376 aa10.28□□□□□ -0.76
PPP4R1-202ENST00000400555 RNASEH2CQ8TDP1 164 aaKnown RBP10.28□□□□□ -0.76
PPP4R1-202ENST00000400555 MRPL36Q9P0J6 103 aaKnown RBP10.28□□□□□ -0.76
PPP4R1-202ENST00000400555 TNRC6BQ9UPQ9 1833 aaKnown RBP10.28□□□□□ -0.76
PPP4R1-202ENST00000400555 BPIFB3P59826 476 aa10.28□□□□□ -0.76
PPP4R1-202ENST00000400555 WT1-ASQ06250 92 aa10.28□□□□□ -0.76
PPP4R1-202ENST00000400555 LINC01560Q8TB33 94 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms