RNA–Protein interactions for RNA: ENST00000400075.3

GABPA-202, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 4,814 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-202ENST00000400075 IL6RP08887 468 aaPredicted RBP11.82□□□□□ -0.52
GABPA-202ENST00000400075 RNF224P0DH78 156 aa11.82□□□□□ -0.52
GABPA-202ENST00000400075 KRTDAPP60985 99 aa11.82□□□□□ -0.52
GABPA-202ENST00000400075 LEMD1Q68G75 181 aa11.82□□□□□ -0.52
GABPA-202ENST00000400075 EIF4E3Q8N5X7 224 aaKnown RBP11.82□□□□□ -0.52
GABPA-202ENST00000400075 DCAF16Q9NXF7 216 aa11.82□□□□□ -0.52
GABPA-202ENST00000400075 ARL14EPLP0DKL9 152 aa11.81□□□□□ -0.52
GABPA-202ENST00000400075 ZNF345Q14585 488 aa11.81□□□□□ -0.52
GABPA-202ENST00000400075 ANAPC16Q96DE5 110 aa11.81□□□□□ -0.52
GABPA-202ENST00000400075 BCL2P10415 239 aa11.81□□□□□ -0.52
GABPA-202ENST00000400075 TMEM88Q6PEY1 159 aa11.81□□□□□ -0.52
GABPA-202ENST00000400075 SPSB3Q6PJ21 355 aa11.81□□□□□ -0.52
GABPA-202ENST00000400075 TMEM144Q7Z5S9 345 aa11.81□□□□□ -0.52
GABPA-202ENST00000400075 UBE2DNLQ8IWF7 75 aa11.81□□□□□ -0.52
GABPA-202ENST00000400075 Q8TCH9 128 aa11.81□□□□□ -0.52
GABPA-202ENST00000400075 LRRK1Q38SD2 2015 aa11.81□□□□□ -0.52
GABPA-202ENST00000400075 HLA-DRB1P01911 266 aa11.81□□□□□ -0.52
GABPA-202ENST00000400075 OR52E5Q8NH55 327 aa11.81□□□□□ -0.52
GABPA-202ENST00000400075 NRGNQ92686 78 aa11.81□□□□□ -0.52
GABPA-202ENST00000400075 VOPP1Q96AW1 172 aa11.81□□□□□ -0.52
GABPA-202ENST00000400075 HELZP42694 1942 aaKnown RBP11.81□□□□□ -0.52
GABPA-202ENST00000400075 IGLV3-9A0A075B6K5 115 aa11.81□□□□□ -0.52
GABPA-202ENST00000400075 PRCDQ00LT1 54 aa11.81□□□□□ -0.52
GABPA-202ENST00000400075 Q1RN00 199 aa11.81□□□□□ -0.52
GABPA-202ENST00000400075 TCF24Q7RTU0 167 aa11.81□□□□□ -0.52
GABPA-202ENST00000400075 SLC50A1Q9BRV3 221 aa11.81□□□□□ -0.52
GABPA-202ENST00000400075 IGKV3OR2-268A0A0C4DH90 116 aa11.8□□□□□ -0.52
GABPA-202ENST00000400075 E9PQ18 207 aa11.8□□□□□ -0.52
GABPA-202ENST00000400075 ZNF705AQ6ZN79 300 aaPredicted RBP11.8□□□□□ -0.52
GABPA-202ENST00000400075 ATG101Q9BSB4 218 aa11.8□□□□□ -0.52
GABPA-202ENST00000400075 MEF2BQ02080 365 aaPredicted RBP11.8□□□□□ -0.52
GABPA-202ENST00000400075 COQ2Q96H96 371 aa11.8□□□□□ -0.52
GABPA-202ENST00000400075 ZNF253O75346 499 aa11.8□□□□□ -0.52
GABPA-202ENST00000400075 DAZAP2Q15038 168 aaPredicted RBP11.8□□□□□ -0.52
GABPA-202ENST00000400075 RAMP3O60896 148 aa11.8□□□□□ -0.52
GABPA-202ENST00000400075 CRYBB3P26998 211 aa11.8□□□□□ -0.52
GABPA-202ENST00000400075 ERVK11-1P61568 191 aa11.8□□□□□ -0.52
GABPA-202ENST00000400075 HS3ST6Q96QI5 342 aa11.8□□□□□ -0.52
GABPA-202ENST00000400075 ADAMTS9Q9P2N4 1935 aa11.79□□□□□ -0.52
GABPA-202ENST00000400075 ZNF324BQ6AW86 544 aaPredicted RBP11.79□□□□□ -0.52
GABPA-202ENST00000400075 OR1P1Q8NH06 330 aa11.79□□□□□ -0.52
GABPA-202ENST00000400075 CRISP2P16562 243 aa11.79□□□□□ -0.52
GABPA-202ENST00000400075 PSMG4Q5JS54 123 aa11.79□□□□□ -0.52
GABPA-202ENST00000400075 Q6ZR03 302 aa11.79□□□□□ -0.52
GABPA-202ENST00000400075 GLMPQ8WWB7 406 aa11.79□□□□□ -0.52
GABPA-202ENST00000400075 FUT9Q9Y231 359 aa11.79□□□□□ -0.52
GABPA-202ENST00000400075 HERVK_113P61574 105 aa11.79□□□□□ -0.52
GABPA-202ENST00000400075 KLF17Q5JT82 389 aaPredicted RBP11.79□□□□□ -0.52
GABPA-202ENST00000400075 IBA57Q5T440 356 aaKnown RBP11.79□□□□□ -0.52
GABPA-202ENST00000400075 PLXND1Q9Y4D7 1925 aa11.79□□□□□ -0.52
GABPA-202ENST00000400075 KIF26AQ9ULI4 1882 aaPredicted RBP11.79□□□□□ -0.52
GABPA-202ENST00000400075 SHISA9B4DS77 424 aa11.79□□□□□ -0.52
GABPA-202ENST00000400075 H7C1H1 209 aa11.79□□□□□ -0.52
GABPA-202ENST00000400075 GATA2P23769 480 aaPredicted RBP11.79□□□□□ -0.52
GABPA-202ENST00000400075 MYOZ3Q8TDC0 251 aa11.79□□□□□ -0.52
GABPA-202ENST00000400075 C18orf12Q96KH6 178 aa11.79□□□□□ -0.52
GABPA-202ENST00000400075 TNCP24821 2201 aa11.79□□□□□ -0.52
GABPA-202ENST00000400075 OR11H12B2RN74 326 aa11.78□□□□□ -0.52
GABPA-202ENST00000400075 CD8AP01732 235 aa11.78□□□□□ -0.52
GABPA-202ENST00000400075 PACRGQ96M98 296 aaPredicted RBP11.78□□□□□ -0.52
GABPA-202ENST00000400075 TLN2Q9Y4G6 2542 aa11.78□□□□□ -0.52
GABPA-202ENST00000400075 LHFPL4Q7Z7J7 247 aa11.78□□□□□ -0.52
GABPA-202ENST00000400075 LTBP2Q14767 1821 aa11.78□□□□□ -0.52
GABPA-202ENST00000400075 EIF3GO75821 320 aaKnown RBP eCLIP11.78□□□□□ -0.52
GABPA-202ENST00000400075 CD55P08174 381 aa11.78□□□□□ -0.52
GABPA-202ENST00000400075 CKS2P33552 79 aa11.78□□□□□ -0.52
GABPA-202ENST00000400075 PTTG1IPP53801 180 aa11.78□□□□□ -0.52
GABPA-202ENST00000400075 Q8NA96 180 aa11.78□□□□□ -0.52
GABPA-202ENST00000400075 FAM74A7A6NL05 159 aa11.77□□□□□ -0.52
GABPA-202ENST00000400075 ASIPP42127 132 aa11.77□□□□□ -0.52
GABPA-202ENST00000400075 MBNL3Q9NUK0 354 aaKnown RBP11.77□□□□□ -0.52
GABPA-202ENST00000400075 TP53BP1Q12888 1972 aaPredicted RBP11.77□□□□□ -0.52
GABPA-202ENST00000400075 GCHFRP30047 84 aa11.77□□□□□ -0.52
GABPA-202ENST00000400075 Q6P435 159 aa11.77□□□□□ -0.52
GABPA-202ENST00000400075 BEND2Q8NDZ0 799 aa11.77□□□□□ -0.52
GABPA-202ENST00000400075 OR10W1Q8NGF6 305 aa11.77□□□□□ -0.52
GABPA-202ENST00000400075 MCRIP2Q9BUT9 160 aaKnown RBP11.77□□□□□ -0.52
GABPA-202ENST00000400075 PEF1Q9UBV8 284 aaKnown RBP11.77□□□□□ -0.52
GABPA-202ENST00000400075 SIGLEC9Q9Y336 463 aa11.77□□□□□ -0.52
GABPA-202ENST00000400075 IGHV4-30-2A0A087WSY4 118 aa11.77□□□□□ -0.53
GABPA-202ENST00000400075 TEX50A0A1B0GTY4 177 aa11.77□□□□□ -0.53
GABPA-202ENST00000400075 ZNF880Q6PDB4 577 aa11.77□□□□□ -0.53
GABPA-202ENST00000400075 ZNF841Q6ZN19 808 aa11.77□□□□□ -0.53
GABPA-202ENST00000400075 IGHV4-61A0A0C4DH41 118 aa11.77□□□□□ -0.53
GABPA-202ENST00000400075 H0YJW9 148 aa11.77□□□□□ -0.53
GABPA-202ENST00000400075 M0R381 172 aa11.77□□□□□ -0.53
GABPA-202ENST00000400075 C2orf83Q53S99 150 aa11.77□□□□□ -0.53
GABPA-202ENST00000400075 ZNF843Q8N446 348 aa11.77□□□□□ -0.53
GABPA-202ENST00000400075 MIEN1Q9BRT3 115 aa11.77□□□□□ -0.53
GABPA-202ENST00000400075 J3QRE1 110 aa11.76□□□□□ -0.53
GABPA-202ENST00000400075 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.76□□□□□ -0.53
GABPA-202ENST00000400075 NAPSAO96009 420 aa11.76□□□□□ -0.53
GABPA-202ENST00000400075 RPL35AP18077 110 aaKnown RBP11.76□□□□□ -0.53
GABPA-202ENST00000400075 TDGF1P3P51864 188 aa11.76□□□□□ -0.53
GABPA-202ENST00000400075 HIST1H2BAQ96A08 127 aa11.76□□□□□ -0.53
GABPA-202ENST00000400075 AQP10Q96PS8 301 aa11.76□□□□□ -0.53
GABPA-202ENST00000400075 NPCDR1Q9BY65 106 aa11.76□□□□□ -0.53
GABPA-202ENST00000400075 TNFRSF18Q9Y5U5 241 aa11.76□□□□□ -0.53
GABPA-202ENST00000400075 TRBV7-1A0A0A6YYK4 115 aa11.76□□□□□ -0.53
GABPA-202ENST00000400075 CRXO43186 299 aaPredicted RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 132.3 ms