RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 ADMP35318 185 aa9.51□□□□□ -0.89
HLA-DQB1-203ENST00000399082 TAS2R30P59541 319 aa9.51□□□□□ -0.89
HLA-DQB1-203ENST00000399082 RRAS2P62070 204 aaPredicted RBP9.51□□□□□ -0.89
HLA-DQB1-203ENST00000399082 CD69Q07108 199 aa9.51□□□□□ -0.89
HLA-DQB1-203ENST00000399082 SPANXN5Q5MJ07 72 aa9.51□□□□□ -0.89
HLA-DQB1-203ENST00000399082 TMEM14EPQ6UXP3 125 aa9.51□□□□□ -0.89
HLA-DQB1-203ENST00000399082 HAPLN4Q86UW8 402 aa9.51□□□□□ -0.89
HLA-DQB1-203ENST00000399082 WFDC9Q8NEX5 89 aa9.51□□□□□ -0.89
HLA-DQB1-203ENST00000399082 DLX4Q92988 240 aaPredicted RBP9.51□□□□□ -0.89
HLA-DQB1-203ENST00000399082 RAB40CQ96S21 281 aa9.51□□□□□ -0.89
HLA-DQB1-203ENST00000399082 CHRDL1Q9BU40 450 aa9.51□□□□□ -0.89
HLA-DQB1-203ENST00000399082 MED28Q9H204 178 aa9.51□□□□□ -0.89
HLA-DQB1-203ENST00000399082 RANGRFQ9HD47 186 aaPredicted RBP9.51□□□□□ -0.89
HLA-DQB1-203ENST00000399082 ZC4H2Q9NQZ6 224 aa9.51□□□□□ -0.89
HLA-DQB1-203ENST00000399082 PSENENQ9NZ42 101 aa9.51□□□□□ -0.89
HLA-DQB1-203ENST00000399082 OR2T8A6NH00 312 aa9.5□□□□□ -0.89
HLA-DQB1-203ENST00000399082 TSC22D2O75157 780 aa9.5□□□□□ -0.89
HLA-DQB1-203ENST00000399082 CTSGP08311 255 aa9.5□□□□□ -0.89
HLA-DQB1-203ENST00000399082 OR8U8P0C7N1 319 aa9.5□□□□□ -0.89
HLA-DQB1-203ENST00000399082 ARL3P36405 182 aa9.5□□□□□ -0.89
HLA-DQB1-203ENST00000399082 OPRK1P41145 380 aa9.5□□□□□ -0.89
HLA-DQB1-203ENST00000399082 ATP5IP56385 69 aaPredicted RBP9.5□□□□□ -0.89
HLA-DQB1-203ENST00000399082 S100A10P60903 97 aa9.5□□□□□ -0.89
HLA-DQB1-203ENST00000399082 ARL16Q0P5N6 197 aa9.5□□□□□ -0.89
HLA-DQB1-203ENST00000399082 KLF5Q13887 457 aaPredicted RBP9.5□□□□□ -0.89
HLA-DQB1-203ENST00000399082 PRSS54Q6PEW0 395 aa9.5□□□□□ -0.89
HLA-DQB1-203ENST00000399082 Q6ZNX1 250 aa9.5□□□□□ -0.89
HLA-DQB1-203ENST00000399082 DCUN1D4Q92564 292 aa9.5□□□□□ -0.89
HLA-DQB1-203ENST00000399082 ATP6V0BQ99437 205 aa9.5□□□□□ -0.89
HLA-DQB1-203ENST00000399082 OR5AC2Q9NZP5 309 aa9.5□□□□□ -0.89
HLA-DQB1-203ENST00000399082 MGAM2Q2M2H8 2515 aa9.49□□□□□ -0.89
HLA-DQB1-203ENST00000399082 TRAV14DV4A0A0A6YYC5 116 aa9.49□□□□□ -0.89
HLA-DQB1-203ENST00000399082 TGOLN2O43493 480 aa9.49□□□□□ -0.89
HLA-DQB1-203ENST00000399082 DEDDO75618 318 aa9.49□□□□□ -0.89
HLA-DQB1-203ENST00000399082 OR2C1O95371 312 aa9.49□□□□□ -0.89
HLA-DQB1-203ENST00000399082 LY86O95711 162 aa9.49□□□□□ -0.89
HLA-DQB1-203ENST00000399082 MFAP4P55083 255 aa9.49□□□□□ -0.89
HLA-DQB1-203ENST00000399082 LRRC37A5PQ49AS3 106 aa9.49□□□□□ -0.89
HLA-DQB1-203ENST00000399082 ACSM6Q6P461 480 aa9.49□□□□□ -0.89
HLA-DQB1-203ENST00000399082 SLC16A13Q7RTY0 426 aa9.49□□□□□ -0.89
HLA-DQB1-203ENST00000399082 NOXA1Q86UR1 476 aa9.49□□□□□ -0.89
HLA-DQB1-203ENST00000399082 UBAC2Q8NBM4 344 aa9.49□□□□□ -0.89
HLA-DQB1-203ENST00000399082 OR4X1Q8NH49 305 aa9.49□□□□□ -0.89
HLA-DQB1-203ENST00000399082 CHAC2Q8WUX2 184 aa9.49□□□□□ -0.89
HLA-DQB1-203ENST00000399082 PPP1R1CQ8WVI7 109 aa9.49□□□□□ -0.89
HLA-DQB1-203ENST00000399082 DPF1Q92782 380 aa9.49□□□□□ -0.89
HLA-DQB1-203ENST00000399082 BSCL2Q96G97 398 aaPredicted RBP9.49□□□□□ -0.89
HLA-DQB1-203ENST00000399082 RNF126Q9BV68 326 aa9.49□□□□□ -0.89
HLA-DQB1-203ENST00000399082 STRAPQ9Y3F4 350 aaKnown RBP9.49□□□□□ -0.89
HLA-DQB1-203ENST00000399082 IGHV3-35A0A0C4DH35 117 aa9.48□□□□□ -0.89
HLA-DQB1-203ENST00000399082 IGSF23A1L1A6 192 aa9.48□□□□□ -0.89
HLA-DQB1-203ENST00000399082 FAM24AA6NFZ4 105 aa9.48□□□□□ -0.89
HLA-DQB1-203ENST00000399082 GGCTO75223 188 aaKnown RBP9.48□□□□□ -0.89
HLA-DQB1-203ENST00000399082 CLN5O75503 358 aa9.48□□□□□ -0.89
HLA-DQB1-203ENST00000399082 MPC2O95563 127 aa9.48□□□□□ -0.89
HLA-DQB1-203ENST00000399082 IGKV1-17P01599 117 aa9.48□□□□□ -0.89
HLA-DQB1-203ENST00000399082 IFNA4P05014 189 aa9.48□□□□□ -0.89
HLA-DQB1-203ENST00000399082 METTL15P1P0C7V9 234 aa9.48□□□□□ -0.89
HLA-DQB1-203ENST00000399082 EDN2P20800 178 aa9.48□□□□□ -0.89
HLA-DQB1-203ENST00000399082 ZP3P21754 424 aa9.48□□□□□ -0.89
HLA-DQB1-203ENST00000399082 RND2P52198 227 aa9.48□□□□□ -0.89
HLA-DQB1-203ENST00000399082 SYNJ2BPP57105 145 aa9.48□□□□□ -0.89
HLA-DQB1-203ENST00000399082 CYCSP99999 105 aaKnown RBP9.48□□□□□ -0.89
HLA-DQB1-203ENST00000399082 Q56UQ5 140 aa9.48□□□□□ -0.89
HLA-DQB1-203ENST00000399082 FAM209BQ5JX69 171 aa9.48□□□□□ -0.89
HLA-DQB1-203ENST00000399082 UNQ9165/PRO28630Q6UXU0 137 aa9.48□□□□□ -0.89
HLA-DQB1-203ENST00000399082 IL34Q6ZMJ4 242 aa9.48□□□□□ -0.89
HLA-DQB1-203ENST00000399082 TMEM116Q8NCL8 245 aa9.48□□□□□ -0.89
HLA-DQB1-203ENST00000399082 TXN2Q99757 166 aa9.48□□□□□ -0.89
HLA-DQB1-203ENST00000399082 ZNF436Q9C0F3 470 aaPredicted RBP9.48□□□□□ -0.89
HLA-DQB1-203ENST00000399082 PAIP2BQ9ULR5 123 aaKnown RBP9.48□□□□□ -0.89
HLA-DQB1-203ENST00000399082 IGKV1D-37A0A075B6S9 117 aa9.47□□□□□ -0.89
HLA-DQB1-203ENST00000399082 IGKV1OR2-108A0A075B7D4 117 aa9.47□□□□□ -0.89
HLA-DQB1-203ENST00000399082 RPS10-NUDT3A0A1W2PQS6 291 aa9.47□□□□□ -0.89
HLA-DQB1-203ENST00000399082 G3V3Q6 166 aa9.47□□□□□ -0.89
HLA-DQB1-203ENST00000399082 L7N2F9 121 aa9.47□□□□□ -0.89
HLA-DQB1-203ENST00000399082 IGLC1P0CG04 106 aa9.47□□□□□ -0.89
HLA-DQB1-203ENST00000399082 SLC25A4P12235 298 aa9.47□□□□□ -0.89
HLA-DQB1-203ENST00000399082 GPX4P36969 197 aaPredicted RBP9.47□□□□□ -0.89
HLA-DQB1-203ENST00000399082 SMCPP49901 116 aaPredicted RBP9.47□□□□□ -0.89
HLA-DQB1-203ENST00000399082 RAB11AP62491 216 aa9.47□□□□□ -0.89
HLA-DQB1-203ENST00000399082 VAMP2P63027 116 aa9.47□□□□□ -0.89
HLA-DQB1-203ENST00000399082 RPP30P78346 268 aaKnown RBP9.47□□□□□ -0.89
HLA-DQB1-203ENST00000399082 GAMTQ14353 236 aa9.47□□□□□ -0.89
HLA-DQB1-203ENST00000399082 RPEL1Q2QD12 228 aa9.47□□□□□ -0.89
HLA-DQB1-203ENST00000399082 Q5BKY6 102 aa9.47□□□□□ -0.89
HLA-DQB1-203ENST00000399082 LCE2CQ5TA81 110 aa9.47□□□□□ -0.89
HLA-DQB1-203ENST00000399082 OR8G2PQ6IF36 304 aa9.47□□□□□ -0.89
HLA-DQB1-203ENST00000399082 SPSB3Q6PJ21 355 aa9.47□□□□□ -0.89
HLA-DQB1-203ENST00000399082 ACOT7LQ6ZUV0 252 aa9.47□□□□□ -0.89
HLA-DQB1-203ENST00000399082 GPHB5Q86YW7 130 aa9.47□□□□□ -0.89
HLA-DQB1-203ENST00000399082 C1QL4Q86Z23 238 aa9.47□□□□□ -0.89
HLA-DQB1-203ENST00000399082 NPIPB3Q92617 1050 aa9.47□□□□□ -0.89
HLA-DQB1-203ENST00000399082 LYRM2Q9NU23 88 aaPredicted RBP9.47□□□□□ -0.89
HLA-DQB1-203ENST00000399082 DNAH3Q8TD57 4116 aa9.47□□□□□ -0.89
HLA-DQB1-203ENST00000399082 NOTCH3Q9UM47 2321 aa9.47□□□□□ -0.89
HLA-DQB1-203ENST00000399082 OVOL1O14753 267 aa9.46□□□□□ -0.9
HLA-DQB1-203ENST00000399082 GNG7O60262 68 aa9.46□□□□□ -0.9
HLA-DQB1-203ENST00000399082 GIPP09681 153 aaPredicted RBP9.46□□□□□ -0.9
HLA-DQB1-203ENST00000399082 LYL1P12980 280 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms