RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 DCTN2Q13561 401 aaKnown RBP19.3■□□□□ 0.68
TSPAN4-207ENST00000397411 PVRIGQ6DKI7 326 aa19.3■□□□□ 0.68
TSPAN4-207ENST00000397411 MITD1Q8WV92 249 aa19.3■□□□□ 0.68
TSPAN4-207ENST00000397411 SCGB2A1O75556 95 aa19.29■□□□□ 0.68
TSPAN4-207ENST00000397411 YIF1AO95070 293 aa19.29■□□□□ 0.68
TSPAN4-207ENST00000397411 CTSGP08311 255 aa19.29■□□□□ 0.68
TSPAN4-207ENST00000397411 FOLR2P14207 255 aa19.29■□□□□ 0.68
TSPAN4-207ENST00000397411 FCGR2BP31994 310 aaPredicted RBP19.29■□□□□ 0.68
TSPAN4-207ENST00000397411 RNASEH2CQ8TDP1 164 aaKnown RBP19.29■□□□□ 0.68
TSPAN4-207ENST00000397411 C20orf24Q9BUV8 137 aa19.29■□□□□ 0.68
TSPAN4-207ENST00000397411 ZNF436Q9C0F3 470 aaPredicted RBP19.29■□□□□ 0.68
TSPAN4-207ENST00000397411 MAGT1Q9H0U3 335 aa19.29■□□□□ 0.68
TSPAN4-207ENST00000397411 PAIP2BQ9ULR5 123 aaKnown RBP19.29■□□□□ 0.68
TSPAN4-207ENST00000397411 F8W735 103 aaPredicted RBP19.28■□□□□ 0.68
TSPAN4-207ENST00000397411 NDUFA4O00483 81 aa19.28■□□□□ 0.68
TSPAN4-207ENST00000397411 IFNA4P05014 189 aa19.28■□□□□ 0.68
TSPAN4-207ENST00000397411 IAPPP10997 89 aa19.28■□□□□ 0.68
TSPAN4-207ENST00000397411 CBLN1P23435 193 aa19.28■□□□□ 0.68
TSPAN4-207ENST00000397411 IFITM3Q01628 133 aa19.28■□□□□ 0.68
TSPAN4-207ENST00000397411 MLANAQ16655 118 aa19.28■□□□□ 0.68
TSPAN4-207ENST00000397411 TM4SF20Q53R12 229 aa19.28■□□□□ 0.68
TSPAN4-207ENST00000397411 ETFRF1Q6IPR1 90 aa19.28■□□□□ 0.68
TSPAN4-207ENST00000397411 C11orf87Q6NUJ2 197 aa19.28■□□□□ 0.68
TSPAN4-207ENST00000397411 UNQ9165/PRO28630Q6UXU0 137 aa19.28■□□□□ 0.68
TSPAN4-207ENST00000397411 ZNF431Q8TF32 576 aaPredicted RBP19.28■□□□□ 0.68
TSPAN4-207ENST00000397411 SEC22CQ9BRL7 303 aa19.28■□□□□ 0.68
TSPAN4-207ENST00000397411 GP9P14770 177 aa19.27■□□□□ 0.68
TSPAN4-207ENST00000397411 ADMP35318 185 aa19.27■□□□□ 0.68
TSPAN4-207ENST00000397411 ATP5IP56385 69 aaPredicted RBP19.27■□□□□ 0.68
TSPAN4-207ENST00000397411 LCN12Q6JVE5 192 aa19.27■□□□□ 0.68
TSPAN4-207ENST00000397411 CIB3Q96Q77 187 aaPredicted RBP19.27■□□□□ 0.68
TSPAN4-207ENST00000397411 WRBO00258 174 aa19.26■□□□□ 0.67
TSPAN4-207ENST00000397411 SYNGR2O43760 224 aa19.26■□□□□ 0.67
TSPAN4-207ENST00000397411 TMEM50AO95807 157 aa19.26■□□□□ 0.67
TSPAN4-207ENST00000397411 ELLP55199 621 aaPredicted RBP19.26■□□□□ 0.67
TSPAN4-207ENST00000397411 RAB11AP62491 216 aa19.26■□□□□ 0.67
TSPAN4-207ENST00000397411 RPP30P78346 268 aaKnown RBP19.26■□□□□ 0.67
TSPAN4-207ENST00000397411 MARC2Q969Z3 335 aa19.26■□□□□ 0.67
TSPAN4-207ENST00000397411 FNDC4Q9H6D8 234 aaPredicted RBP19.26■□□□□ 0.67
TSPAN4-207ENST00000397411 TECRQ9NZ01 308 aaKnown RBP19.26■□□□□ 0.67
TSPAN4-207ENST00000397411 GSKIPQ9P0R6 139 aa19.26■□□□□ 0.67
TSPAN4-207ENST00000397411 A8MWP6 167 aa19.25■□□□□ 0.67
TSPAN4-207ENST00000397411 SLC25A4P12235 298 aa19.25■□□□□ 0.67
TSPAN4-207ENST00000397411 IAH1Q2TAA2 248 aaPredicted RBP19.25■□□□□ 0.67
TSPAN4-207ENST00000397411 C12orf45Q8N5I9 185 aaPredicted RBP19.25■□□□□ 0.67
TSPAN4-207ENST00000397411 OR2K2Q8NGT1 345 aa19.25■□□□□ 0.67
TSPAN4-207ENST00000397411 CACNG8Q8WXS5 425 aa19.25■□□□□ 0.67
TSPAN4-207ENST00000397411 TMEM190Q8WZ59 177 aa19.25■□□□□ 0.67
TSPAN4-207ENST00000397411 TMEM213A2RRL7 107 aa19.24■□□□□ 0.67
TSPAN4-207ENST00000397411 MPTX1A8MV57 137 aa19.24■□□□□ 0.67
TSPAN4-207ENST00000397411 CLN5O75503 358 aa19.24■□□□□ 0.67
TSPAN4-207ENST00000397411 EDN2P20800 178 aa19.24■□□□□ 0.67
TSPAN4-207ENST00000397411 NKX2-1P43699 371 aaPredicted RBP19.24■□□□□ 0.67
TSPAN4-207ENST00000397411 ADAMTSL5Q6ZMM2 481 aa19.24■□□□□ 0.67
TSPAN4-207ENST00000397411 OR4X1Q8NH49 305 aa19.24■□□□□ 0.67
TSPAN4-207ENST00000397411 GPN1Q9HCN4 374 aaPredicted RBP19.24■□□□□ 0.67
TSPAN4-207ENST00000397411 MRPL27Q9P0M9 148 aaKnown RBP19.24■□□□□ 0.67
TSPAN4-207ENST00000397411 IGHV3OR16-8A0A075B7F1 116 aa19.23■□□□□ 0.67
TSPAN4-207ENST00000397411 TRAV30A0A087WSZ9 112 aa19.23■□□□□ 0.67
TSPAN4-207ENST00000397411 FAM25EA8MYX2 175 aa19.23■□□□□ 0.67
TSPAN4-207ENST00000397411 SCGB1D2O95969 90 aa19.23■□□□□ 0.67
TSPAN4-207ENST00000397411 DEFB114Q30KQ6 69 aa19.23■□□□□ 0.67
TSPAN4-207ENST00000397411 NRARPQ7Z6K4 114 aa19.23■□□□□ 0.67
TSPAN4-207ENST00000397411 TMEM170AQ8WVE7 144 aa19.23■□□□□ 0.67
TSPAN4-207ENST00000397411 DAZ1Q9NQZ3 744 aaKnown RBP19.23■□□□□ 0.67
TSPAN4-207ENST00000397411 ZNF207O43670 478 aaKnown RBP19.22■□□□□ 0.67
TSPAN4-207ENST00000397411 CD300EQ496F6 205 aaPredicted RBP19.22■□□□□ 0.67
TSPAN4-207ENST00000397411 OR10C1Q96KK4 312 aa19.22■□□□□ 0.67
TSPAN4-207ENST00000397411 SELENOKQ9Y6D0 94 aa19.22■□□□□ 0.67
TSPAN4-207ENST00000397411 C5orf51A6NDU8 294 aa19.21■□□□□ 0.67
TSPAN4-207ENST00000397411 K7EMT4 169 aa19.21■□□□□ 0.67
TSPAN4-207ENST00000397411 IL5P05113 134 aa19.21■□□□□ 0.67
TSPAN4-207ENST00000397411 RND2P52198 227 aa19.21■□□□□ 0.67
TSPAN4-207ENST00000397411 ID3Q02535 119 aa19.21■□□□□ 0.67
TSPAN4-207ENST00000397411 GUCA2BQ16661 112 aa19.21■□□□□ 0.67
TSPAN4-207ENST00000397411 ZNF600Q6ZNG1 722 aa19.21■□□□□ 0.67
TSPAN4-207ENST00000397411 ZBTB8BQ8NAP8 495 aaPredicted RBP19.21■□□□□ 0.67
TSPAN4-207ENST00000397411 ACY3Q96HD9 319 aa19.21■□□□□ 0.67
TSPAN4-207ENST00000397411 MRPL36Q9P0J6 103 aaKnown RBP19.21■□□□□ 0.67
TSPAN4-207ENST00000397411 IZUMO1RA6ND01 250 aa19.2■□□□□ 0.66
TSPAN4-207ENST00000397411 C15orf62A8K5M9 175 aa19.2■□□□□ 0.66
TSPAN4-207ENST00000397411 INMT-MINDY4F8WBC2 141 aa19.2■□□□□ 0.66
TSPAN4-207ENST00000397411 CCSO14618 274 aa19.2■□□□□ 0.66
TSPAN4-207ENST00000397411 POLR2GP62487 172 aaKnown RBP eCLIP19.2■□□□□ 0.66
TSPAN4-207ENST00000397411 CD69Q07108 199 aa19.2■□□□□ 0.66
TSPAN4-207ENST00000397411 SPANXN5Q5MJ07 72 aa19.2■□□□□ 0.66
TSPAN4-207ENST00000397411 PRSS54Q6PEW0 395 aa19.2■□□□□ 0.66
TSPAN4-207ENST00000397411 OR4D5Q8NGN0 318 aa19.2■□□□□ 0.66
TSPAN4-207ENST00000397411 GINS3Q9BRX5 216 aa19.2■□□□□ 0.66
TSPAN4-207ENST00000397411 GPX4P36969 197 aaPredicted RBP19.19■□□□□ 0.66
TSPAN4-207ENST00000397411 BTNL8Q6UX41 500 aa19.19■□□□□ 0.66
TSPAN4-207ENST00000397411 RBPMS2Q6ZRY4 209 aaKnown RBP19.19■□□□□ 0.66
TSPAN4-207ENST00000397411 SLC16A13Q7RTY0 426 aa19.19■□□□□ 0.66
TSPAN4-207ENST00000397411 GTSCR1Q86UQ5 136 aa19.19■□□□□ 0.66
TSPAN4-207ENST00000397411 NPIPB3Q92617 1050 aa19.19■□□□□ 0.66
TSPAN4-207ENST00000397411 MLXQ9UH92 298 aa19.19■□□□□ 0.66
TSPAN4-207ENST00000397411 STRAPQ9Y3F4 350 aaKnown RBP19.19■□□□□ 0.66
TSPAN4-207ENST00000397411 PUS1Q9Y606 427 aaKnown RBP eCLIP19.19■□□□□ 0.66
TSPAN4-207ENST00000397411 SMAD5-AS1Q9Y6J3 95 aa19.19■□□□□ 0.66
TSPAN4-207ENST00000397411 C8orf88P0DMB2 117 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms