RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 RNASEH2CQ8TDP1 164 aaKnown RBP16.12■□□□□ 0.17
TSPAN4-206ENST00000397408 ZNF436Q9C0F3 470 aaPredicted RBP16.12■□□□□ 0.17
TSPAN4-206ENST00000397408 SORL1Q92673 2214 aa16.12■□□□□ 0.17
TSPAN4-206ENST00000397408 RPS10-NUDT3A0A1W2PQS6 291 aa16.11■□□□□ 0.17
TSPAN4-206ENST00000397408 C2orf70A6NJV1 201 aa16.11■□□□□ 0.17
TSPAN4-206ENST00000397408 A8MWP6 167 aa16.11■□□□□ 0.17
TSPAN4-206ENST00000397408 CCSO14618 274 aa16.11■□□□□ 0.17
TSPAN4-206ENST00000397408 SYNGR2O43760 224 aa16.11■□□□□ 0.17
TSPAN4-206ENST00000397408 CTSGP08311 255 aa16.11■□□□□ 0.17
TSPAN4-206ENST00000397408 EDN2P20800 178 aa16.11■□□□□ 0.17
TSPAN4-206ENST00000397408 MLANAQ16655 118 aa16.11■□□□□ 0.17
TSPAN4-206ENST00000397408 IAH1Q2TAA2 248 aaPredicted RBP16.11■□□□□ 0.17
TSPAN4-206ENST00000397408 C12orf45Q8N5I9 185 aaPredicted RBP16.11■□□□□ 0.17
TSPAN4-206ENST00000397408 OR4D5Q8NGN0 318 aa16.11■□□□□ 0.17
TSPAN4-206ENST00000397408 SIGLEC8Q9NYZ4 499 aa16.11■□□□□ 0.17
TSPAN4-206ENST00000397408 MRPL36Q9P0J6 103 aaKnown RBP16.11■□□□□ 0.17
TSPAN4-206ENST00000397408 WI2-2373I1.2A0A1W2PRP0 233 aa16.11■□□□□ 0.17
TSPAN4-206ENST00000397408 IGLV1-51P01701 117 aa16.11■□□□□ 0.17
TSPAN4-206ENST00000397408 IL5P05113 134 aa16.11■□□□□ 0.17
TSPAN4-206ENST00000397408 TMEM190Q8WZ59 177 aa16.11■□□□□ 0.17
TSPAN4-206ENST00000397408 OR10C1Q96KK4 312 aa16.11■□□□□ 0.17
TSPAN4-206ENST00000397408 PRR25Q96S07 402 aa16.11■□□□□ 0.17
TSPAN4-206ENST00000397408 ZNF256Q9Y2P7 627 aaPredicted RBP16.11■□□□□ 0.17
TSPAN4-206ENST00000397408 TMEM213A2RRL7 107 aa16.1■□□□□ 0.17
TSPAN4-206ENST00000397408 WRBO00258 174 aa16.1■□□□□ 0.17
TSPAN4-206ENST00000397408 NDUFA4O00483 81 aa16.1■□□□□ 0.17
TSPAN4-206ENST00000397408 LY86O95711 162 aa16.1■□□□□ 0.17
TSPAN4-206ENST00000397408 NKX2-1P43699 371 aaPredicted RBP16.1■□□□□ 0.17
TSPAN4-206ENST00000397408 RELQ04864 619 aaPredicted RBP16.1■□□□□ 0.17
TSPAN4-206ENST00000397408 ADAMTSL5Q6ZMM2 481 aa16.1■□□□□ 0.17
TSPAN4-206ENST00000397408 ZBTB8BQ8NAP8 495 aaPredicted RBP16.1■□□□□ 0.17
TSPAN4-206ENST00000397408 CACNG8Q8WXS5 425 aa16.1■□□□□ 0.17
TSPAN4-206ENST00000397408 CIB3Q96Q77 187 aaPredicted RBP16.1■□□□□ 0.17
TSPAN4-206ENST00000397408 PALMDQ9NP74 551 aa16.1■□□□□ 0.17
TSPAN4-206ENST00000397408 INMT-MINDY4F8WBC2 141 aa16.09■□□□□ 0.17
TSPAN4-206ENST00000397408 K7EIL1 84 aa16.09■□□□□ 0.17
TSPAN4-206ENST00000397408 SCGB1D2O95969 90 aa16.09■□□□□ 0.17
TSPAN4-206ENST00000397408 IFNA4P05014 189 aa16.09■□□□□ 0.17
TSPAN4-206ENST00000397408 FOLR2P14207 255 aa16.09■□□□□ 0.17
TSPAN4-206ENST00000397408 SPNP16150 400 aa16.09■□□□□ 0.17
TSPAN4-206ENST00000397408 POLR2GP62487 172 aaKnown RBP eCLIP16.09■□□□□ 0.17
TSPAN4-206ENST00000397408 ID3Q02535 119 aa16.09■□□□□ 0.17
TSPAN4-206ENST00000397408 OR4X1Q8NH49 305 aa16.09■□□□□ 0.17
TSPAN4-206ENST00000397408 MRAPQ8TCY5 172 aa16.09■□□□□ 0.17
TSPAN4-206ENST00000397408 DYNLRB2Q8TF09 96 aa16.09■□□□□ 0.17
TSPAN4-206ENST00000397408 GPN1Q9HCN4 374 aaPredicted RBP16.09■□□□□ 0.17
TSPAN4-206ENST00000397408 UFC1Q9Y3C8 167 aa16.09■□□□□ 0.17
TSPAN4-206ENST00000397408 C15orf62A8K5M9 175 aa16.08■□□□□ 0.16
TSPAN4-206ENST00000397408 FAM25EA8MYX2 175 aa16.08■□□□□ 0.16
TSPAN4-206ENST00000397408 CLN5O75503 358 aa16.08■□□□□ 0.16
TSPAN4-206ENST00000397408 ATP5IP56385 69 aaPredicted RBP16.08■□□□□ 0.16
TSPAN4-206ENST00000397408 TM4SF20Q53R12 229 aa16.08■□□□□ 0.16
TSPAN4-206ENST00000397408 ZNF414Q96IQ9 312 aa16.08■□□□□ 0.16
TSPAN4-206ENST00000397408 MARVELD1Q9BSK0 173 aa16.08■□□□□ 0.16
TSPAN4-206ENST00000397408 C20orf24Q9BUV8 137 aa16.08■□□□□ 0.16
TSPAN4-206ENST00000397408 GSKIPQ9P0R6 139 aa16.08■□□□□ 0.16
TSPAN4-206ENST00000397408 PAIP2BQ9ULR5 123 aaKnown RBP16.08■□□□□ 0.16
TSPAN4-206ENST00000397408 PRKDCP78527 4128 aaKnown RBP16.07■□□□□ 0.16
TSPAN4-206ENST00000397408 IGHV3OR16-8A0A075B7F1 116 aa16.07■□□□□ 0.16
TSPAN4-206ENST00000397408 SSSCA1O60232 199 aa16.07■□□□□ 0.16
TSPAN4-206ENST00000397408 PRAF2O60831 178 aa16.07■□□□□ 0.16
TSPAN4-206ENST00000397408 SLC25A4P12235 298 aa16.07■□□□□ 0.16
TSPAN4-206ENST00000397408 RND2P52198 227 aa16.07■□□□□ 0.16
TSPAN4-206ENST00000397408 ETFRF1Q6IPR1 90 aa16.07■□□□□ 0.16
TSPAN4-206ENST00000397408 PRSS54Q6PEW0 395 aa16.07■□□□□ 0.16
TSPAN4-206ENST00000397408 SLC16A13Q7RTY0 426 aa16.07■□□□□ 0.16
TSPAN4-206ENST00000397408 C5orf51A6NDU8 294 aa16.06■□□□□ 0.16
TSPAN4-206ENST00000397408 H3BP45 60 aa16.06■□□□□ 0.16
TSPAN4-206ENST00000397408 YIF1AO95070 293 aa16.06■□□□□ 0.16
TSPAN4-206ENST00000397408 TMEM50AO95807 157 aa16.06■□□□□ 0.16
TSPAN4-206ENST00000397408 CBLN1P23435 193 aa16.06■□□□□ 0.16
TSPAN4-206ENST00000397408 CD69Q07108 199 aa16.06■□□□□ 0.16
TSPAN4-206ENST00000397408 SCGB2A1O75556 95 aa16.05■□□□□ 0.16
TSPAN4-206ENST00000397408 ELLP55199 621 aaPredicted RBP16.05■□□□□ 0.16
TSPAN4-206ENST00000397408 RAB11AP62491 216 aa16.05■□□□□ 0.16
TSPAN4-206ENST00000397408 RPP30P78346 268 aaKnown RBP16.05■□□□□ 0.16
TSPAN4-206ENST00000397408 SPANXN5Q5MJ07 72 aa16.05■□□□□ 0.16
TSPAN4-206ENST00000397408 DAZ1Q9NQZ3 744 aaKnown RBP16.05■□□□□ 0.16
TSPAN4-206ENST00000397408 SNRPGP15A8MWD9 76 aa16.04■□□□□ 0.16
TSPAN4-206ENST00000397408 ZNF207O43670 478 aaKnown RBP16.04■□□□□ 0.16
TSPAN4-206ENST00000397408 GP9P14770 177 aa16.04■□□□□ 0.16
TSPAN4-206ENST00000397408 CD300EQ496F6 205 aaPredicted RBP16.04■□□□□ 0.16
TSPAN4-206ENST00000397408 LCN12Q6JVE5 192 aa16.04■□□□□ 0.16
TSPAN4-206ENST00000397408 ZNF600Q6ZNG1 722 aa16.04■□□□□ 0.16
TSPAN4-206ENST00000397408 TMEM116Q8NCL8 245 aa16.04■□□□□ 0.16
TSPAN4-206ENST00000397408 MARC2Q969Z3 335 aa16.04■□□□□ 0.16
TSPAN4-206ENST00000397408 ACY3Q96HD9 319 aa16.04■□□□□ 0.16
TSPAN4-206ENST00000397408 SELENOKQ9Y6D0 94 aa16.04■□□□□ 0.16
TSPAN4-206ENST00000397408 OR2K2Q8NGT1 345 aa16.03■□□□□ 0.16
TSPAN4-206ENST00000397408 TECRQ9NZ01 308 aaKnown RBP16.03■□□□□ 0.16
TSPAN4-206ENST00000397408 RCL1Q9Y2P8 373 aaKnown RBP16.03■□□□□ 0.16
TSPAN4-206ENST00000397408 STRAPQ9Y3F4 350 aaKnown RBP16.03■□□□□ 0.16
TSPAN4-206ENST00000397408 TRAV30A0A087WSZ9 112 aa16.02■□□□□ 0.16
TSPAN4-206ENST00000397408 IZUMO1RA6ND01 250 aa16.02■□□□□ 0.16
TSPAN4-206ENST00000397408 PTTG1O95997 202 aa16.02■□□□□ 0.16
TSPAN4-206ENST00000397408 IGKV1-17P01599 117 aa16.02■□□□□ 0.16
TSPAN4-206ENST00000397408 MBPP02686 304 aaPredicted RBP16.02■□□□□ 0.16
TSPAN4-206ENST00000397408 IGLC1P0CG04 106 aa16.02■□□□□ 0.16
TSPAN4-206ENST00000397408 OR10J1P30954 320 aa16.02■□□□□ 0.16
TSPAN4-206ENST00000397408 DEFB114Q30KQ6 69 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 382.2 ms