RNA–Protein interactions for RNA: ENST00000396828.8

NEDD8-202, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-202ENST00000396828 STX12Q86Y82 276 aa7.96□□□□□ -1.14
NEDD8-202ENST00000396828 GRPEL2Q8TAA5 225 aa7.96□□□□□ -1.14
NEDD8-202ENST00000396828 ABHD5Q8WTS1 349 aa7.96□□□□□ -1.14
NEDD8-202ENST00000396828 SRSF12Q8WXF0 261 aaKnown RBP7.96□□□□□ -1.14
NEDD8-202ENST00000396828 ARPC1AQ92747 370 aa7.96□□□□□ -1.14
NEDD8-202ENST00000396828 DLX4Q92988 240 aaPredicted RBP7.96□□□□□ -1.14
NEDD8-202ENST00000396828 SRSF8Q9BRL6 282 aaKnown RBP7.96□□□□□ -1.14
NEDD8-202ENST00000396828 ZNF580Q9UK33 172 aa7.96□□□□□ -1.14
NEDD8-202ENST00000396828 STRAPQ9Y3F4 350 aaKnown RBP7.96□□□□□ -1.14
NEDD8-202ENST00000396828 U3KQ87 197 aa7.96□□□□□ -1.14
NEDD8-202ENST00000396828 A0A0D9SG52 128 aa7.95□□□□□ -1.14
NEDD8-202ENST00000396828 MSGN1A6NI15 193 aa7.95□□□□□ -1.14
NEDD8-202ENST00000396828 HTR2BP41595 481 aa7.95□□□□□ -1.14
NEDD8-202ENST00000396828 AP2S1P53680 142 aaPredicted RBP7.95□□□□□ -1.14
NEDD8-202ENST00000396828 PAX9P55771 341 aa7.95□□□□□ -1.14
NEDD8-202ENST00000396828 RAB11AP62491 216 aa7.95□□□□□ -1.14
NEDD8-202ENST00000396828 CX3CL1P78423 397 aa7.95□□□□□ -1.14
NEDD8-202ENST00000396828 RUNX1Q01196 453 aa7.95□□□□□ -1.14
NEDD8-202ENST00000396828 BAXQ07812 192 aa7.95□□□□□ -1.14
NEDD8-202ENST00000396828 ZNF616Q08AN1 781 aa7.95□□□□□ -1.14
NEDD8-202ENST00000396828 OR2F1Q13607 317 aa7.95□□□□□ -1.14
NEDD8-202ENST00000396828 ZNF345Q14585 488 aa7.95□□□□□ -1.14
NEDD8-202ENST00000396828 C10orf55Q5SWW7 151 aa7.95□□□□□ -1.14
NEDD8-202ENST00000396828 SLC24A4Q8NFF2 622 aa7.95□□□□□ -1.14
NEDD8-202ENST00000396828 OR10W1Q8NGF6 305 aa7.95□□□□□ -1.14
NEDD8-202ENST00000396828 AQP10Q96PS8 301 aa7.95□□□□□ -1.14
NEDD8-202ENST00000396828 C11orf1Q9H5F2 150 aa7.95□□□□□ -1.14
NEDD8-202ENST00000396828 PAIP2BQ9ULR5 123 aaKnown RBP7.95□□□□□ -1.14
NEDD8-202ENST00000396828 IGHV4OR15-8A0A075B7B6 117 aa7.94□□□□□ -1.14
NEDD8-202ENST00000396828 A0A087WW49 117 aa7.94□□□□□ -1.14
NEDD8-202ENST00000396828 TRAV41A0A0B4J266 112 aa7.94□□□□□ -1.14
NEDD8-202ENST00000396828 FAM24AA6NFZ4 105 aa7.94□□□□□ -1.14
NEDD8-202ENST00000396828 H3BP45 60 aa7.94□□□□□ -1.14
NEDD8-202ENST00000396828 TMEM50AO95807 157 aa7.94□□□□□ -1.14
NEDD8-202ENST00000396828 OR8U8P0C7N1 319 aa7.94□□□□□ -1.14
NEDD8-202ENST00000396828 OR13C7P0DN81 318 aa7.94□□□□□ -1.14
NEDD8-202ENST00000396828 EGR2P11161 476 aaPredicted RBP7.94□□□□□ -1.14
NEDD8-202ENST00000396828 NPY1RP25929 384 aa7.94□□□□□ -1.14
NEDD8-202ENST00000396828 SULT1A1P50225 295 aa7.94□□□□□ -1.14
NEDD8-202ENST00000396828 NKX2-5P52952 324 aaPredicted RBP7.94□□□□□ -1.14
NEDD8-202ENST00000396828 HBG1P69891 147 aa7.94□□□□□ -1.14
NEDD8-202ENST00000396828 HBG2P69892 147 aa7.94□□□□□ -1.14
NEDD8-202ENST00000396828 TMEM267Q0VDI3 215 aaPredicted RBP7.94□□□□□ -1.14
NEDD8-202ENST00000396828 ECSCRQ19T08 205 aa7.94□□□□□ -1.14
NEDD8-202ENST00000396828 CASC10Q5T4H9 136 aa7.94□□□□□ -1.14
NEDD8-202ENST00000396828 HAPLN4Q86UW8 402 aa7.94□□□□□ -1.14
NEDD8-202ENST00000396828 TMEM252Q8N6L7 170 aa7.94□□□□□ -1.14
NEDD8-202ENST00000396828 HSPB11Q9Y547 144 aa7.94□□□□□ -1.14
NEDD8-202ENST00000396828 SMAD5-AS1Q9Y6J3 95 aa7.94□□□□□ -1.14
NEDD8-202ENST00000396828 HYDINQ4G0P3 5121 aa7.94□□□□□ -1.14
NEDD8-202ENST00000396828 KANTRA0A1W2PQU2 76 aa7.93□□□□□ -1.14
NEDD8-202ENST00000396828 IGLC7A0M8Q6 106 aa7.93□□□□□ -1.14
NEDD8-202ENST00000396828 IGSF23A1L1A6 192 aa7.93□□□□□ -1.14
NEDD8-202ENST00000396828 RNF222A6NCQ9 220 aa7.93□□□□□ -1.14
NEDD8-202ENST00000396828 CGB1A6NKQ9 187 aa7.93□□□□□ -1.14
NEDD8-202ENST00000396828 TEX22C9J3V5 150 aa7.93□□□□□ -1.14
NEDD8-202ENST00000396828 E7EUB6 86 aa7.93□□□□□ -1.14
NEDD8-202ENST00000396828 C3orf84H3BNL1 204 aa7.93□□□□□ -1.14
NEDD8-202ENST00000396828 OVOL1O14753 267 aa7.93□□□□□ -1.14
NEDD8-202ENST00000396828 CYB5BO43169 146 aa7.93□□□□□ -1.14
NEDD8-202ENST00000396828 SAP30O75446 220 aa7.93□□□□□ -1.14
NEDD8-202ENST00000396828 FRMD6-AS1P0C7T7 363 aa7.93□□□□□ -1.14
NEDD8-202ENST00000396828 METTL15P1P0C7V9 234 aa7.93□□□□□ -1.14
NEDD8-202ENST00000396828 CXCL2P19875 107 aa7.93□□□□□ -1.14
NEDD8-202ENST00000396828 S100A11P31949 105 aa7.93□□□□□ -1.14
NEDD8-202ENST00000396828 SSBP2P81877 361 aaPredicted RBP7.93□□□□□ -1.14
NEDD8-202ENST00000396828 EWSR1Q01844 656 aaKnown RBP eCLIP7.93□□□□□ -1.14
NEDD8-202ENST00000396828 WT1-ASQ06250 92 aa7.93□□□□□ -1.14
NEDD8-202ENST00000396828 LGALSLQ3ZCW2 172 aaPredicted RBP7.93□□□□□ -1.14
NEDD8-202ENST00000396828 TMUB2Q71RG4 321 aa7.93□□□□□ -1.14
NEDD8-202ENST00000396828 C9orf62Q8N4C0 152 aa7.93□□□□□ -1.14
NEDD8-202ENST00000396828 KCNRGQ8N5I3 272 aa7.93□□□□□ -1.14
NEDD8-202ENST00000396828 OR10P1Q8NGE3 313 aa7.93□□□□□ -1.14
NEDD8-202ENST00000396828 OR1L6Q8NGR2 347 aa7.93□□□□□ -1.14
NEDD8-202ENST00000396828 TMEM68Q96MH6 324 aa7.93□□□□□ -1.14
NEDD8-202ENST00000396828 RCHY1Q96PM5 261 aa7.93□□□□□ -1.14
NEDD8-202ENST00000396828 FAM103A1Q9BTL3 118 aaKnown RBP7.93□□□□□ -1.14
NEDD8-202ENST00000396828 ARL6Q9H0F7 186 aa7.93□□□□□ -1.14
NEDD8-202ENST00000396828 A0A1B0GW64 132 aa7.92□□□□□ -1.14
NEDD8-202ENST00000396828 TAAR5O14804 337 aa7.92□□□□□ -1.14
NEDD8-202ENST00000396828 CST7O76096 145 aa7.92□□□□□ -1.14
NEDD8-202ENST00000396828 IGHV3-11P01762 117 aa7.92□□□□□ -1.14
NEDD8-202ENST00000396828 IFNA4P05014 189 aa7.92□□□□□ -1.14
NEDD8-202ENST00000396828 APELAP0DMC3 54 aa7.92□□□□□ -1.14
NEDD8-202ENST00000396828 DEFA4P12838 97 aa7.92□□□□□ -1.14
NEDD8-202ENST00000396828 GP9P14770 177 aa7.92□□□□□ -1.14
NEDD8-202ENST00000396828 INSL3P51460 131 aa7.92□□□□□ -1.14
NEDD8-202ENST00000396828 NHLH2Q02577 135 aa7.92□□□□□ -1.14
NEDD8-202ENST00000396828 C2orf83Q53S99 150 aa7.92□□□□□ -1.14
NEDD8-202ENST00000396828 TMEM14EPQ6UXP3 125 aa7.92□□□□□ -1.14
NEDD8-202ENST00000396828 ZNF114Q8NC26 417 aa7.92□□□□□ -1.14
NEDD8-202ENST00000396828 OR1S2Q8NGQ3 325 aa7.92□□□□□ -1.14
NEDD8-202ENST00000396828 MUC7Q8TAX7 377 aa7.92□□□□□ -1.14
NEDD8-202ENST00000396828 PINX1Q96BK5 328 aaKnown RBP7.92□□□□□ -1.14
NEDD8-202ENST00000396828 MS4A10Q96PG2 267 aa7.92□□□□□ -1.14
NEDD8-202ENST00000396828 OR4C12Q96R67 309 aa7.92□□□□□ -1.14
NEDD8-202ENST00000396828 ARPC5LQ9BPX5 153 aa7.92□□□□□ -1.14
NEDD8-202ENST00000396828 C15orf62A8K5M9 175 aa7.91□□□□□ -1.14
NEDD8-202ENST00000396828 NPIPB5A8MRT5 1133 aa7.91□□□□□ -1.14
NEDD8-202ENST00000396828 LINC01619G3V211 115 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms