RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 TFF3Q07654 80 aa12.95□□□□□ -0.34
GNE-202ENST00000396594 ST20Q9HBF5 79 aa12.95□□□□□ -0.34
GNE-202ENST00000396594 GREB1Q4ZG55 1949 aa12.95□□□□□ -0.34
GNE-202ENST00000396594 NDUFS6O75380 124 aaKnown RBP12.95□□□□□ -0.34
GNE-202ENST00000396594 NUDT10Q8NFP7 164 aa12.95□□□□□ -0.34
GNE-202ENST00000396594 GNB1LQ9BYB4 327 aa12.95□□□□□ -0.34
GNE-202ENST00000396594 HAX1O00165 279 aa12.95□□□□□ -0.34
GNE-202ENST00000396594 TTC9CQ8N5M4 171 aa12.95□□□□□ -0.34
GNE-202ENST00000396594 LINC01587Q99440 93 aa12.95□□□□□ -0.34
GNE-202ENST00000396594 PIKFYVEQ9Y2I7 2098 aa12.95□□□□□ -0.34
GNE-202ENST00000396594 MST1P26927 711 aa12.95□□□□□ -0.34
GNE-202ENST00000396594 KIR3DL3Q8N743 410 aa12.95□□□□□ -0.34
GNE-202ENST00000396594 LINC00477Q96M19 166 aa12.95□□□□□ -0.34
GNE-202ENST00000396594 NINQ8N4C6 2090 aa12.94□□□□□ -0.34
GNE-202ENST00000396594 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.94□□□□□ -0.34
GNE-202ENST00000396594 RPL24P83731 157 aaKnown RBP12.94□□□□□ -0.34
GNE-202ENST00000396594 PLA2G2CQ5R387 149 aa12.94□□□□□ -0.34
GNE-202ENST00000396594 TGIF2-C20orf24A0A0A6YYL0 155 aa12.94□□□□□ -0.34
GNE-202ENST00000396594 GAGE10A6NGK3 116 aa12.94□□□□□ -0.34
GNE-202ENST00000396594 TIMM23O14925 209 aa12.94□□□□□ -0.34
GNE-202ENST00000396594 SEC11AP67812 179 aa12.94□□□□□ -0.34
GNE-202ENST00000396594 SRSF1Q07955 248 aaKnown RBP eCLIP12.94□□□□□ -0.34
GNE-202ENST00000396594 PROB1E7EW31 1015 aa12.94□□□□□ -0.34
GNE-202ENST00000396594 EFNA2O43921 213 aa12.94□□□□□ -0.34
GNE-202ENST00000396594 EFNB3Q15768 340 aa12.94□□□□□ -0.34
GNE-202ENST00000396594 SCGB3A1Q96QR1 104 aa12.94□□□□□ -0.34
GNE-202ENST00000396594 IGHV1-3A0A0C4DH29 117 aa12.93□□□□□ -0.34
GNE-202ENST00000396594 DNAL4O96015 105 aa12.93□□□□□ -0.34
GNE-202ENST00000396594 CCL3L1P16619 93 aa12.93□□□□□ -0.34
GNE-202ENST00000396594 PDE6HQ13956 83 aa12.93□□□□□ -0.34
GNE-202ENST00000396594 PSMB11A5LHX3 300 aa12.93□□□□□ -0.34
GNE-202ENST00000396594 NBL1P41271 181 aa12.93□□□□□ -0.34
GNE-202ENST00000396594 WFIKKN1Q96NZ8 548 aa12.93□□□□□ -0.34
GNE-202ENST00000396594 SUMO2P61956 95 aaKnown RBP12.93□□□□□ -0.34
GNE-202ENST00000396594 NMSQ5H8A3 153 aa12.93□□□□□ -0.34
GNE-202ENST00000396594 CFAP161Q6P656 301 aa12.93□□□□□ -0.34
GNE-202ENST00000396594 SIGLEC15Q6ZMC9 328 aa12.93□□□□□ -0.34
GNE-202ENST00000396594 MIR17HGQ75NE6 70 aa12.93□□□□□ -0.34
GNE-202ENST00000396594 LAMTOR2Q9Y2Q5 125 aa12.93□□□□□ -0.34
GNE-202ENST00000396594 CD55P08174 381 aa12.93□□□□□ -0.34
GNE-202ENST00000396594 PRTN3P24158 256 aa12.93□□□□□ -0.34
GNE-202ENST00000396594 BTCP35070 178 aa12.93□□□□□ -0.34
GNE-202ENST00000396594 IFI27P40305 119 aaPredicted RBP12.93□□□□□ -0.34
GNE-202ENST00000396594 VMO1Q7Z5L0 202 aa12.93□□□□□ -0.34
GNE-202ENST00000396594 MRAP2Q96G30 205 aa12.93□□□□□ -0.34
GNE-202ENST00000396594 PSG8Q9UQ74 426 aa12.93□□□□□ -0.34
GNE-202ENST00000396594 IGHV3OR16-12A0A075B7B8 117 aa12.92□□□□□ -0.34
GNE-202ENST00000396594 SMAD7O15105 426 aaKnown RBP12.92□□□□□ -0.34
GNE-202ENST00000396594 CDKN1AP38936 164 aa12.92□□□□□ -0.34
GNE-202ENST00000396594 RNF126Q9BV68 326 aa12.92□□□□□ -0.34
GNE-202ENST00000396594 AURKAIP1Q9NWT8 199 aaPredicted RBP12.92□□□□□ -0.34
GNE-202ENST00000396594 Q0VFX4 171 aa12.92□□□□□ -0.34
GNE-202ENST00000396594 TMEM170AQ8WVE7 144 aa12.92□□□□□ -0.34
GNE-202ENST00000396594 ITLN2Q8WWU7 325 aaPredicted RBP12.92□□□□□ -0.34
GNE-202ENST00000396594 AGMATQ9BSE5 352 aa12.92□□□□□ -0.34
GNE-202ENST00000396594 IGKV1D-13A0A0B4J2D9 117 aa12.92□□□□□ -0.34
GNE-202ENST00000396594 A0A0G2JNJ9 132 aa12.92□□□□□ -0.34
GNE-202ENST00000396594 SMIM13P0DJ93 91 aa12.92□□□□□ -0.34
GNE-202ENST00000396594 IGKV1-13P0DP09 117 aa12.92□□□□□ -0.34
GNE-202ENST00000396594 PEF1Q9UBV8 284 aaKnown RBP12.92□□□□□ -0.34
GNE-202ENST00000396594 Q9UFV3 132 aa12.92□□□□□ -0.34
GNE-202ENST00000396594 NDUFB8O95169 186 aa12.92□□□□□ -0.34
GNE-202ENST00000396594 TSKUQ8WUA8 353 aa12.92□□□□□ -0.34
GNE-202ENST00000396594 C5orf64Q2M2E5 130 aa12.91□□□□□ -0.34
GNE-202ENST00000396594 EAF1Q96JC9 268 aaPredicted RBP12.91□□□□□ -0.34
GNE-202ENST00000396594 GAFA1Q96PS6 74 aa12.91□□□□□ -0.34
GNE-202ENST00000396594 DPRXA6NFQ7 191 aa12.91□□□□□ -0.34
GNE-202ENST00000396594 TMEM14EPQ6UXP3 125 aa12.91□□□□□ -0.34
GNE-202ENST00000396594 BIVMQ86UB2 503 aa12.91□□□□□ -0.34
GNE-202ENST00000396594 TMEM200BQ69YZ2 307 aa12.91□□□□□ -0.34
GNE-202ENST00000396594 OR5AN1Q8NGI8 311 aa12.91□□□□□ -0.34
GNE-202ENST00000396594 F11RQ9Y624 299 aaKnown RBP12.91□□□□□ -0.34
GNE-202ENST00000396594 GBF1Q92538 1859 aa12.91□□□□□ -0.34
GNE-202ENST00000396594 LMO1P25800 156 aa12.91□□□□□ -0.34
GNE-202ENST00000396594 LINC00311Q8N616 119 aa12.91□□□□□ -0.34
GNE-202ENST00000396594 SSC4DQ8WTU2 575 aa12.91□□□□□ -0.34
GNE-202ENST00000396594 ATG2BQ96BY7 2078 aa12.9□□□□□ -0.34
GNE-202ENST00000396594 SCO2A0A1W2PP80 73 aa12.9□□□□□ -0.34
GNE-202ENST00000396594 LYL1P12980 280 aa12.9□□□□□ -0.34
GNE-202ENST00000396594 Q6P435 159 aa12.9□□□□□ -0.34
GNE-202ENST00000396594 TEX38Q6PEX7 206 aa12.9□□□□□ -0.34
GNE-202ENST00000396594 CYSLTR1Q9Y271 337 aa12.9□□□□□ -0.34
GNE-202ENST00000396594 TOMM40O96008 361 aa12.9□□□□□ -0.34
GNE-202ENST00000396594 SUPT4H1P63272 117 aaKnown RBP12.9□□□□□ -0.34
GNE-202ENST00000396594 RFNGQ9Y644 331 aa12.9□□□□□ -0.34
GNE-202ENST00000396594 SCN5AQ14524 2016 aa12.9□□□□□ -0.34
GNE-202ENST00000396594 CGB1A6NKQ9 187 aa12.9□□□□□ -0.34
GNE-202ENST00000396594 CEACAM8P31997 349 aaPredicted RBP12.9□□□□□ -0.34
GNE-202ENST00000396594 IFITM2Q01629 132 aa12.9□□□□□ -0.34
GNE-202ENST00000396594 NUDT11Q96G61 164 aa12.9□□□□□ -0.34
GNE-202ENST00000396594 PRADC1Q9BSG0 188 aa12.9□□□□□ -0.34
GNE-202ENST00000396594 RPL23P62829 140 aaKnown RBP12.9□□□□□ -0.35
GNE-202ENST00000396594 FAM74A4Q5TZK3 123 aa12.9□□□□□ -0.35
GNE-202ENST00000396594 SLC25A39Q9BZJ4 359 aaPredicted RBP12.9□□□□□ -0.35
GNE-202ENST00000396594 H0YJW9 148 aa12.89□□□□□ -0.35
GNE-202ENST00000396594 BUB1B-PAK6H3BSN5 160 aa12.89□□□□□ -0.35
GNE-202ENST00000396594 LY6G6FQ5SQ64 297 aa12.89□□□□□ -0.35
GNE-202ENST00000396594 TET1Q8NFU7 2136 aa12.89□□□□□ -0.35
GNE-202ENST00000396594 JKAMPQ9P055 326 aa12.89□□□□□ -0.35
GNE-202ENST00000396594 A0A0A6YYD4 124 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms