RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 OR7C2O60412 319 aa11.95□□□□□ -0.5
CBX3-202ENST00000396386 NDUFB4O95168 129 aa11.95□□□□□ -0.5
CBX3-202ENST00000396386 RPS10P46783 165 aaKnown RBP11.95□□□□□ -0.5
CBX3-202ENST00000396386 MFAP2P55001 183 aa11.95□□□□□ -0.5
CBX3-202ENST00000396386 BPIFB3P59826 476 aa11.95□□□□□ -0.5
CBX3-202ENST00000396386 LHFPL4Q7Z7J7 247 aa11.95□□□□□ -0.5
CBX3-202ENST00000396386 OR1L4Q8NGR5 311 aa11.95□□□□□ -0.5
CBX3-202ENST00000396386 UHRF2Q96PU4 802 aa11.95□□□□□ -0.5
CBX3-202ENST00000396386 PFDN5Q99471 154 aa11.95□□□□□ -0.5
CBX3-202ENST00000396386 SSX3Q99909 188 aa11.95□□□□□ -0.5
CBX3-202ENST00000396386 SRSF8Q9BRL6 282 aaKnown RBP11.95□□□□□ -0.5
CBX3-202ENST00000396386 F11RQ9Y624 299 aaKnown RBP11.95□□□□□ -0.5
CBX3-202ENST00000396386 IGKV1D-37A0A075B6S9 117 aa11.95□□□□□ -0.5
CBX3-202ENST00000396386 PSMB11A5LHX3 300 aa11.95□□□□□ -0.5
CBX3-202ENST00000396386 H7BYZ3 331 aa11.95□□□□□ -0.5
CBX3-202ENST00000396386 COX7A2P2O60397 106 aa11.95□□□□□ -0.5
CBX3-202ENST00000396386 TSPAN9O75954 239 aa11.95□□□□□ -0.5
CBX3-202ENST00000396386 MOSP00540 346 aa11.95□□□□□ -0.5
CBX3-202ENST00000396386 CRYGCP07315 174 aa11.95□□□□□ -0.5
CBX3-202ENST00000396386 HOXB4P17483 251 aaPredicted RBP11.95□□□□□ -0.5
CBX3-202ENST00000396386 ZFP36P26651 326 aaKnown RBP11.95□□□□□ -0.5
CBX3-202ENST00000396386 PAX2Q02962 417 aa11.95□□□□□ -0.5
CBX3-202ENST00000396386 CCDC144NLQ6NUI1 221 aa11.95□□□□□ -0.5
CBX3-202ENST00000396386 MRPL36Q9P0J6 103 aaKnown RBP11.95□□□□□ -0.5
CBX3-202ENST00000396386 A0A1W2PRD5 423 aa11.94□□□□□ -0.5
CBX3-202ENST00000396386 A0A1W2PRF3 423 aa11.94□□□□□ -0.5
CBX3-202ENST00000396386 A0A1W2PRM7 423 aa11.94□□□□□ -0.5
CBX3-202ENST00000396386 OOSP1A8MZH6 123 aa11.94□□□□□ -0.5
CBX3-202ENST00000396386 GOSR1O95249 250 aa11.94□□□□□ -0.5
CBX3-202ENST00000396386 IGHV3-48P01763 117 aa11.94□□□□□ -0.5
CBX3-202ENST00000396386 S100A6P06703 90 aa11.94□□□□□ -0.5
CBX3-202ENST00000396386 C8orf88P0DMB2 117 aa11.94□□□□□ -0.5
CBX3-202ENST00000396386 APELAP0DMC3 54 aa11.94□□□□□ -0.5
CBX3-202ENST00000396386 C11orf52Q96A22 123 aa11.94□□□□□ -0.5
CBX3-202ENST00000396386 ANAPC16Q96DE5 110 aa11.94□□□□□ -0.5
CBX3-202ENST00000396386 DERL1Q9BUN8 251 aa11.94□□□□□ -0.5
CBX3-202ENST00000396386 KLF2Q9Y5W3 355 aaPredicted RBP11.94□□□□□ -0.5
CBX3-202ENST00000396386 IGHV2-70DA0A0C4DH43 119 aa11.93□□□□□ -0.5
CBX3-202ENST00000396386 NDUFA3O95167 84 aa11.93□□□□□ -0.5
CBX3-202ENST00000396386 LCN2P80188 198 aa11.93□□□□□ -0.5
CBX3-202ENST00000396386 MINOS1Q5TGZ0 78 aa11.93□□□□□ -0.5
CBX3-202ENST00000396386 C19orf35Q6ZS72 473 aa11.93□□□□□ -0.5
CBX3-202ENST00000396386 TMEM37Q8WXS4 190 aa11.93□□□□□ -0.5
CBX3-202ENST00000396386 SLC25A33Q9BSK2 321 aa11.93□□□□□ -0.5
CBX3-202ENST00000396386 SIRPDQ9H106 197 aa11.93□□□□□ -0.5
CBX3-202ENST00000396386 DNAJC4Q9NNZ3 241 aa11.93□□□□□ -0.5
CBX3-202ENST00000396386 MINOS1-NBL1R4GNA1 71 aa11.93□□□□□ -0.5
CBX3-202ENST00000396386 ARHGAP32A7KAX9 2087 aa11.93□□□□□ -0.5
CBX3-202ENST00000396386 OVOL3O00110 214 aa11.93□□□□□ -0.5
CBX3-202ENST00000396386 CNIH1O95406 144 aa11.93□□□□□ -0.5
CBX3-202ENST00000396386 ZNF90Q03938 601 aa11.93□□□□□ -0.5
CBX3-202ENST00000396386 C10orf113Q5VZT2 155 aa11.93□□□□□ -0.5
CBX3-202ENST00000396386 LINC01551Q86U37 167 aa11.93□□□□□ -0.5
CBX3-202ENST00000396386 NPBQ8NG41 125 aa11.93□□□□□ -0.5
CBX3-202ENST00000396386 ZNF503Q96F45 646 aa11.93□□□□□ -0.5
CBX3-202ENST00000396386 FAM210BQ96KR6 192 aa11.93□□□□□ -0.5
CBX3-202ENST00000396386 OR5B12Q96R08 314 aa11.93□□□□□ -0.5
CBX3-202ENST00000396386 TRGV9Q99603 122 aa11.93□□□□□ -0.5
CBX3-202ENST00000396386 TNFRSF19Q9NS68 423 aa11.93□□□□□ -0.5
CBX3-202ENST00000396386 TRBV24-1A0A075B6N3 115 aa11.92□□□□□ -0.5
CBX3-202ENST00000396386 FCN1O00602 326 aa11.92□□□□□ -0.5
CBX3-202ENST00000396386 TGOLN2O43493 480 aa11.92□□□□□ -0.5
CBX3-202ENST00000396386 S100PP25815 95 aa11.92□□□□□ -0.5
CBX3-202ENST00000396386 HES1Q14469 280 aa11.92□□□□□ -0.5
CBX3-202ENST00000396386 OR2T10Q8NGZ9 312 aa11.92□□□□□ -0.5
CBX3-202ENST00000396386 OR4X1Q8NH49 305 aa11.92□□□□□ -0.5
CBX3-202ENST00000396386 EAF1Q96JC9 268 aaPredicted RBP11.92□□□□□ -0.5
CBX3-202ENST00000396386 SLC25A2Q9BXI2 301 aa11.92□□□□□ -0.5
CBX3-202ENST00000396386 BPESC1Q9GZL8 116 aa11.92□□□□□ -0.5
CBX3-202ENST00000396386 CD99P14209 185 aa11.91□□□□□ -0.5
CBX3-202ENST00000396386 GALR1P47211 349 aa11.91□□□□□ -0.5
CBX3-202ENST00000396386 LGALS4P56470 323 aa11.91□□□□□ -0.5
CBX3-202ENST00000396386 UBE2L3P68036 154 aaKnown RBP11.91□□□□□ -0.5
CBX3-202ENST00000396386 SSX2Q16385 188 aa11.91□□□□□ -0.5
CBX3-202ENST00000396386 TMEM116Q8NCL8 245 aa11.91□□□□□ -0.5
CBX3-202ENST00000396386 OR5T1Q8NG75 326 aa11.91□□□□□ -0.5
CBX3-202ENST00000396386 RELNP78509 3460 aa11.91□□□□□ -0.5
CBX3-202ENST00000396386 AKR1D1P51857 326 aa11.91□□□□□ -0.5
CBX3-202ENST00000396386 NECAP1Q8NC96 275 aa11.91□□□□□ -0.5
CBX3-202ENST00000396386 OR5AU1Q8NGC0 362 aa11.91□□□□□ -0.5
CBX3-202ENST00000396386 FAM167A-AS1Q96KT0 104 aa11.91□□□□□ -0.5
CBX3-202ENST00000396386 ZNF355PQ9NSJ1 428 aa11.91□□□□□ -0.5
CBX3-202ENST00000396386 PLXNB1O43157 2135 aa11.91□□□□□ -0.5
CBX3-202ENST00000396386 LRBAP50851 2863 aa11.9□□□□□ -0.5
CBX3-202ENST00000396386 SPTBN1Q01082 2364 aaKnown RBP11.9□□□□□ -0.5
CBX3-202ENST00000396386 TRBV20OR9-2A0A075B6H5 130 aa11.9□□□□□ -0.5
CBX3-202ENST00000396386 C5orf52A6NGY3 159 aa11.9□□□□□ -0.5
CBX3-202ENST00000396386 TOX4O94842 621 aa11.9□□□□□ -0.5
CBX3-202ENST00000396386 PRB1P04280 392 aa11.9□□□□□ -0.5
CBX3-202ENST00000396386 OR10J4P0C629 311 aa11.9□□□□□ -0.5
CBX3-202ENST00000396386 PDLIM4P50479 330 aa11.9□□□□□ -0.5
CBX3-202ENST00000396386 LMO4P61968 165 aa11.9□□□□□ -0.5
CBX3-202ENST00000396386 SNRPEP62304 92 aaKnown RBP11.9□□□□□ -0.5
CBX3-202ENST00000396386 C5orf64Q2M2E5 130 aa11.9□□□□□ -0.5
CBX3-202ENST00000396386 MORN5Q5VZ52 161 aa11.9□□□□□ -0.5
CBX3-202ENST00000396386 IGFBPL1Q8WX77 278 aa11.9□□□□□ -0.5
CBX3-202ENST00000396386 TBL2Q9Y4P3 447 aaKnown RBP11.9□□□□□ -0.5
CBX3-202ENST00000396386 ELOA3CA0A087WX78 387 aaPredicted RBP11.89□□□□□ -0.51
CBX3-202ENST00000396386 IGHV3-21A0A0B4J1V1 117 aa11.89□□□□□ -0.51
CBX3-202ENST00000396386 MDFIC2A0A1B0GVS7 189 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms