RNA–Protein interactions for RNA: ENST00000396033.6

ITGB1-202, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene ITGB1, Length 3,784 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-202ENST00000396033 A0A1W2PRD5 423 aa9.74□□□□□ -0.85
ITGB1-202ENST00000396033 A0A1W2PRF3 423 aa9.74□□□□□ -0.85
ITGB1-202ENST00000396033 A0A1W2PRM7 423 aa9.74□□□□□ -0.85
ITGB1-202ENST00000396033 STAG3L2P0CL84 134 aa9.74□□□□□ -0.85
ITGB1-202ENST00000396033 STAG3L3P0CL85 134 aa9.74□□□□□ -0.85
ITGB1-202ENST00000396033 UBE2G2P60604 165 aa9.74□□□□□ -0.85
ITGB1-202ENST00000396033 RNASEH2CQ8TDP1 164 aaKnown RBP9.74□□□□□ -0.85
ITGB1-202ENST00000396033 CACNG8Q8WXS5 425 aa9.74□□□□□ -0.85
ITGB1-202ENST00000396033 NAV3Q8IVL0 2385 aa9.74□□□□□ -0.85
ITGB1-202ENST00000396033 C11orf94C9JXX5 98 aa9.74□□□□□ -0.85
ITGB1-202ENST00000396033 CXorf1O96002 111 aa9.74□□□□□ -0.85
ITGB1-202ENST00000396033 ZFP36P26651 326 aaKnown RBP9.74□□□□□ -0.85
ITGB1-202ENST00000396033 CEACAM3P40198 252 aa9.74□□□□□ -0.85
ITGB1-202ENST00000396033 PKIAP61925 76 aa9.74□□□□□ -0.85
ITGB1-202ENST00000396033 TMEM249Q2WGJ8 235 aa9.74□□□□□ -0.85
ITGB1-202ENST00000396033 SPATA31B1PQ5VZV4 182 aa9.74□□□□□ -0.85
ITGB1-202ENST00000396033 OR2T6Q8NHC8 308 aa9.74□□□□□ -0.85
ITGB1-202ENST00000396033 RPUSD4Q96CM3 377 aaKnown RBP9.74□□□□□ -0.85
ITGB1-202ENST00000396033 SMIM7Q9BQ49 75 aa9.74□□□□□ -0.85
ITGB1-202ENST00000396033 FBXL15Q9H469 300 aa9.74□□□□□ -0.85
ITGB1-202ENST00000396033 SEPSECSQ9HD40 501 aaKnown RBP9.74□□□□□ -0.85
ITGB1-202ENST00000396033 TMEM250H0YL14 139 aa9.74□□□□□ -0.85
ITGB1-202ENST00000396033 LINC00869P0C866 280 aa9.74□□□□□ -0.85
ITGB1-202ENST00000396033 RELQ04864 619 aaPredicted RBP9.74□□□□□ -0.85
ITGB1-202ENST00000396033 PLGLAQ15195 96 aa9.74□□□□□ -0.85
ITGB1-202ENST00000396033 PPP1R27Q86WC6 154 aa9.74□□□□□ -0.85
ITGB1-202ENST00000396033 IGLC7A0M8Q6 106 aa9.73□□□□□ -0.85
ITGB1-202ENST00000396033 ODF3BA8MYP8 253 aa9.73□□□□□ -0.85
ITGB1-202ENST00000396033 APELAP0DMC3 54 aa9.73□□□□□ -0.85
ITGB1-202ENST00000396033 COMPP49747 757 aaPredicted RBP9.73□□□□□ -0.85
ITGB1-202ENST00000396033 PNRC1Q12796 327 aaPredicted RBP9.73□□□□□ -0.85
ITGB1-202ENST00000396033 HCP5Q6MZN7 132 aa9.73□□□□□ -0.85
ITGB1-202ENST00000396033 VMO1Q7Z5L0 202 aa9.73□□□□□ -0.85
ITGB1-202ENST00000396033 LHFPL4Q7Z7J7 247 aa9.73□□□□□ -0.85
ITGB1-202ENST00000396033 VENTXO95231 258 aa9.73□□□□□ -0.85
ITGB1-202ENST00000396033 GATA2P23769 480 aaPredicted RBP9.73□□□□□ -0.85
ITGB1-202ENST00000396033 LCN2P80188 198 aa9.73□□□□□ -0.85
ITGB1-202ENST00000396033 CST9LP1Q5W188 147 aa9.73□□□□□ -0.85
ITGB1-202ENST00000396033 KIR3DL3Q8N743 410 aa9.73□□□□□ -0.85
ITGB1-202ENST00000396033 SNHG12Q9BXW3 62 aa9.73□□□□□ -0.85
ITGB1-202ENST00000396033 TCAPO15273 167 aa9.73□□□□□ -0.85
ITGB1-202ENST00000396033 RNF5Q99942 180 aa9.73□□□□□ -0.85
ITGB1-202ENST00000396033 FNDC4Q9H6D8 234 aaPredicted RBP9.73□□□□□ -0.85
ITGB1-202ENST00000396033 PLXNB1O43157 2135 aa9.73□□□□□ -0.85
ITGB1-202ENST00000396033 A0A087WWC5 75 aa9.72□□□□□ -0.85
ITGB1-202ENST00000396033 FAM78BQ5VT40 261 aa9.72□□□□□ -0.85
ITGB1-202ENST00000396033 IGFBPL1Q8WX77 278 aa9.72□□□□□ -0.85
ITGB1-202ENST00000396033 BPESC1Q9GZL8 116 aa9.72□□□□□ -0.85
ITGB1-202ENST00000396033 PARLQ9H300 379 aa9.72□□□□□ -0.85
ITGB1-202ENST00000396033 SDF2L1Q9HCN8 221 aa9.72□□□□□ -0.85
ITGB1-202ENST00000396033 MT-CO2P00403 227 aa9.72□□□□□ -0.85
ITGB1-202ENST00000396033 AREGP15514 252 aa9.72□□□□□ -0.85
ITGB1-202ENST00000396033 MMDQ15546 238 aa9.72□□□□□ -0.85
ITGB1-202ENST00000396033 IGHV3-48P01763 117 aa9.72□□□□□ -0.85
ITGB1-202ENST00000396033 ATP5G3P48201 142 aa9.72□□□□□ -0.85
ITGB1-202ENST00000396033 C1orf122Q6ZSJ8 110 aa9.72□□□□□ -0.85
ITGB1-202ENST00000396033 NAT8Q9UHE5 227 aa9.72□□□□□ -0.85
ITGB1-202ENST00000396033 AKAP6Q13023 2319 aa9.71□□□□□ -0.85
ITGB1-202ENST00000396033 B4DEV8 164 aa9.71□□□□□ -0.85
ITGB1-202ENST00000396033 MIR17HGQ75NE6 70 aa9.71□□□□□ -0.85
ITGB1-202ENST00000396033 OVOL3O00110 214 aa9.71□□□□□ -0.85
ITGB1-202ENST00000396033 HOXB4P17483 251 aaPredicted RBP9.71□□□□□ -0.85
ITGB1-202ENST00000396033 G0S2P27469 103 aa9.71□□□□□ -0.85
ITGB1-202ENST00000396033 GCHFRP30047 84 aa9.71□□□□□ -0.85
ITGB1-202ENST00000396033 SSBP2P81877 361 aaPredicted RBP9.71□□□□□ -0.85
ITGB1-202ENST00000396033 C19orf35Q6ZS72 473 aa9.71□□□□□ -0.85
ITGB1-202ENST00000396033 CYP2G1PQ6ZSU1 146 aa9.71□□□□□ -0.85
ITGB1-202ENST00000396033 CFHR4Q92496 578 aa9.71□□□□□ -0.85
ITGB1-202ENST00000396033 NPIPB3Q92617 1050 aa9.71□□□□□ -0.85
ITGB1-202ENST00000396033 PACRGQ96M98 296 aaPredicted RBP9.71□□□□□ -0.85
ITGB1-202ENST00000396033 FUT9Q9Y231 359 aa9.71□□□□□ -0.85
ITGB1-202ENST00000396033 PDE6DO43924 150 aa9.71□□□□□ -0.86
ITGB1-202ENST00000396033 ADIRFQ15847 76 aa9.71□□□□□ -0.86
ITGB1-202ENST00000396033 ZNF114Q8NC26 417 aa9.71□□□□□ -0.86
ITGB1-202ENST00000396033 SRSF12Q8WXF0 261 aaKnown RBP9.71□□□□□ -0.86
ITGB1-202ENST00000396033 FOXH1O75593 365 aa9.7□□□□□ -0.86
ITGB1-202ENST00000396033 AMBPP02760 352 aa9.7□□□□□ -0.86
ITGB1-202ENST00000396033 CD24P25063 80 aa9.7□□□□□ -0.86
ITGB1-202ENST00000396033 HES1Q14469 280 aa9.7□□□□□ -0.86
ITGB1-202ENST00000396033 TMEM241Q24JQ0 296 aa9.7□□□□□ -0.86
ITGB1-202ENST00000396033 IGHV2-70DA0A0C4DH43 119 aa9.7□□□□□ -0.86
ITGB1-202ENST00000396033 TEX22C9J3V5 150 aa9.7□□□□□ -0.86
ITGB1-202ENST00000396033 FCN1O00602 326 aa9.7□□□□□ -0.86
ITGB1-202ENST00000396033 MOSP00540 346 aa9.7□□□□□ -0.86
ITGB1-202ENST00000396033 CACNA1BQ00975 2339 aa9.7□□□□□ -0.86
ITGB1-202ENST00000396033 NBR2O15453 112 aa9.7□□□□□ -0.86
ITGB1-202ENST00000396033 IGHV4-39P01824 125 aa9.7□□□□□ -0.86
ITGB1-202ENST00000396033 S100A2P29034 98 aa9.7□□□□□ -0.86
ITGB1-202ENST00000396033 RND2P52198 227 aa9.7□□□□□ -0.86
ITGB1-202ENST00000396033 LGALS4P56470 323 aa9.7□□□□□ -0.86
ITGB1-202ENST00000396033 ETFRF1Q6IPR1 90 aa9.7□□□□□ -0.86
ITGB1-202ENST00000396033 OR51G1Q8NGK1 321 aa9.7□□□□□ -0.86
ITGB1-202ENST00000396033 MRPL36Q9P0J6 103 aaKnown RBP9.7□□□□□ -0.86
ITGB1-202ENST00000396033 SPTAN1Q13813 2472 aaKnown RBP9.7□□□□□ -0.86
ITGB1-202ENST00000396033 CNIH1O95406 144 aa9.69□□□□□ -0.86
ITGB1-202ENST00000396033 MFAP2P55001 183 aa9.69□□□□□ -0.86
ITGB1-202ENST00000396033 CCDC144NLQ6NUI1 221 aa9.69□□□□□ -0.86
ITGB1-202ENST00000396033 OR1P1Q8NH06 330 aa9.69□□□□□ -0.86
ITGB1-202ENST00000396033 SIRPDQ9H106 197 aa9.69□□□□□ -0.86
ITGB1-202ENST00000396033 USP24Q9UPU5 2620 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms